Contig 010262:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033I21Sequence533010262 (2)ref|XP_009777829.1|2e-40PREDICTED: beclin-1-like protein isoform X3 [Nicotiana sylvestris]761011216 (2)ref|NP_001275491.1|5e-95beclin-1-like protein-like [Solanum tuberosum] emb|CAJ27524.1| beclin 1 protein
JMFF050D21Sequence638010262 (2)ref|XP_009777814.1|1e-61PREDICTED: beclin-1-like protein isoform X1 [Nicotiana sylvestris]601011216 (2)ref|NP_001275491.1|3e-84beclin-1-like protein-like [Solanum tuberosum] emb|CAJ27524.1| beclin 1 protein

Alignment

This contig is upended


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JMFF050D21+                                                                  CATGC
                      ____________________________________________________________
consensus                                                                    CATGC
 
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JMFF050D21+           ATTCAAGACATAAAGGCTGCTCATTCTGGGTTTGTGTTGTGGCAATGTCAAAGGCACGTT
                      ____________________________________________________________
consensus             ATTCAAGACATAAAGGCTGCTCATTCTGGGTTTGTGTTGTGGCAATGTCAAAGGCACGTT
 
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JMFF050D21+           TTAGGATGGTGATAGTGGAATTAAAGCCTGAATTATTTGGTTGAGTAGGGGTACTGGTAG
                      ____________________________________________________________
consensus             TTAGGATGGTGATAGTGGAATTAAAGCCTGAATTATTTGGTTGAGTAGGGGTACTGGTAG
 
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JMFF050D21+           GTCCATCTTCTTGTGATGGCAGATTGGTTCCAGTTCCATCAGATGCACTCGCATACTGAT
JMFF033I21+                  TTCTTGTGATGGCAGATTGGTTCCAGTTCCATCAGATGCACTCGCATACTGAT
                      ____________________________________________________________
consensus             GTCCATCTTCTTGTGATGGCAGATTGGTTCCAGTTCCATCAGATGCACTCGCATACTGAT
 
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JMFF050D21+           ACACTGAAGCGGCTGGTGGAGGCAACACCACAAAAGACTCTTCCATTGCCCTACCAAA--
JMFF033I21+           ACACTGAAGCGGCTGGTGGAGGCAACACCACAAAAGACTCTTCCATTGCCCTACCAAACT
                      ____________________________________________________________
consensus             ACACTGAAGCGGCTGGTGGAGGCAACACCACAAAAGACTCTTCCATTGCCCTACCAAACT
 
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JMFF050D21+           GGCTTGAATCGGGTGGATTGGTTACTCCTCGAGTGCGAGAAGGAACCCCCA-CCCCATGA
JMFF033I21+           GGCTTGAATCGGGTGGATTGGTTACTCCTCGAGTGCGAGAAGGAACCCCCACCCCCATGA
                      ____________________________________________________________
consensus             GGCTTGAATCGGGTGGATTGGTTACTCCTCGAGTGCGAGAAGGAACCCCCACCCCCATGA
 
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JMFF050D21+           TTTTTTTGCTTGGGTAACACAACAAATGAATTCTCCATACGTGTAGACCCTGTTACACTG
JMFF033I21+           TTTTTTTGCTTGGGTAACACAACAAATGAATTCTCCATACGTGTAGACCCTGTTACACTG
                      ____________________________________________________________
consensus             TTTTTTTGCTTGGGTAACACAACAAATGAATTCTCCATACGTGTAGACCCTGTTACACTG
 
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JMFF050D21+           CCTGCTCCATGGATAGAAGAACCCTGCATAGCAGAGCGAGATGAAGAGGAGGAGGAGTCG
JMFF033I21+           CCAGCTCCATGGATAGAAGAACCCTGCATAGCAGAGCGAGATGAAGAGGAGGAGGAGTCG
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consensus             CCTGCTCCATGGATAGAAGAACCCTGCATAGCAGAGCGAGATGAAGAGGAGGAGGAGTCG
 
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JMFF050D21+           GCGCCGAAGAGCTTGTCAGCATAAGAATCAACGCCAACTACGCAAAAGGAATTATGGCAG
JMFF033I21+           GCGCCGAAGAGCTTGTCAGCATAAGAATCAACGCCAACTACGCAAAAGGAATTATGGCAG
                      ____________________________________________________________
consensus             GCGCCGAAGAGCTTGTCAGCATAAGAATCAACGCCAACTACGCAAAAGGAATTATGGCAG
 
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JMFF050D21+           TTTTGGCAGAGATAGCGGGGGAGATTTGGGTCGACGGGTAAAGTCCGACCCTTATCGGAG
JMFF033I21+           TTTTGGCAGAGATAGCGGGGGAGATTTGGGTCGACGGGTAAAGTCCGACCCTTATCGGAG
                      ____________________________________________________________
consensus             TTTTGGCAGAGATAGCGGGGGAGATTTGGGTCGACGGGTAAAGTCCGACCCTTATCGGAG
 
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JMFF050D21+           TTATTATTGCTGCTTTTCTTCATTGCTTTGATGAATTAGCTTCTAGTCTAGAGATATGGG
JMFF033I21+           TTATTATTGCTGCTTTTCTTCATTGCTTTGATGAATTAGCTTCTAGTCTAGAGATATGGG
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consensus             TTATTATTGCTGCTTTTCTTCATTGCTTTGATGAATTAGCTTCTAGTCTAGAGATATGGG
 
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JMFF050D21+           TGAAGAGGTTTGGAAGAATTAAAGCGTTTCCAAGTT                        
JMFF033I21+           TGAAGAGGTTTGGAAGAATTAAAGCGTTTCCAAGTTGATCAAACTGATGTGATTATCAGT
                      ____________________________________________________________
consensus             TGAAGAGGTTTGGAAGAATTAAAGCGTTTCCAAGTTGATCAAACTGATGTGATTATCAGT