Contig 010261:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF033I09-                                               GATTGAGGTACAACTTAGTAACT
                      ____________________________________________________________
consensus                                                  GATTGAGGTACAACTTAGTAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+                                         TCATGAAATTGTACCCAATACATATATAGA
rJMFF033I09-          TACAATGTTATTGTCCTGAGGGCAAACAAATCATGAAATTGTACACAATACATATATAGA
                      ____________________________________________________________
consensus             TACAATGTTATTGTCCTGAGGGCAAACAAATCATGAAATTGTACCCAATACATATATAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           AAGTGATATACAAATGCCACAATATTGCAAGTGTAACAAGCAACCATATTAGGAAACTAG
rJMFF033I09-          AAGTGATATACAAATGCCACAATATTGCAAGTGTAACAAGCAACCATATTAGGAAACTAG
                      ____________________________________________________________
consensus             AAGTGATATACAAATGCCACAATATTGCAAGTGTAACAAGCAACCATATTAGGAAACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           CAAATTCTTTCATTATATAACTACAGTTACTTACAGTTCATGAGAGCTGTACTCTGCACT
rJMFF033I09-          CAAATTCTTTCATTATATAACTACAGTTACTTACAGTTCATGAGAGCTGTACTCTGCACT
                      ____________________________________________________________
consensus             CAAATTCTTTCATTATATAACTACAGTTACTTACAGTTCATGAGAGCTGTACTCTGCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           ATAGATGATGCTGATACATGCTTAAGCCTACCCTTGTCACGCAAATTTGTTGTCTTGAAA
rJMFF033I09-          ATAGATGATGCTGATACATGCTTAAGCCTACCCTTGTCACGCAAATTTGTTGTCTTGAAA
                      ____________________________________________________________
consensus             ATAGATGATGCTGATACATGCTTAAGCCTACCCTTGTCACGCAAATTTGTTGTCTTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           GCGTCACACTTTACTGGATGACAGTTGATTGTAGCGCTTTGATATAGCATCGGGGATCTC
JMFN001G07+                   CTTTACTGGATGACAGTTGATTGTAGCGCTTTGATATAGCATCGGGGATCTC
rJMFF033I09-          GCGTCACACTTTACTGGATGACAGTTGATTGTAGCGCTTTGATATAGCATCGGGGATCTC
                      ____________________________________________________________
consensus             GCGTCACACTTTACTGGATGACAGTTGATTGTAGCGCTTTGATATAGCATCGGGGATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           CATAGGCAATCTTGACCACACAATCGGGTCTCTGATCTCAGAACTCCTCCTCTTTATCAA
JMFN001G07+           CATAGGCAATCTTGACCACACAATCGGGTCTCTGATCTCAGAACTCCTCCTCTTTATCAA
rJMFF033I09-          CATAGGCAATCTTGACCACACAATCGGGTCTCTGATCTCAGAACTCCTCCTCTTTATCAA
                      ____________________________________________________________
consensus             CATAGGCAATCTTGACCACACAATCGGGTCTCTGATCTCAGAACTCCTCCTCTTTATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           CACGGTTGCTGTCAGCAGCAAGAAAACTGCAGCTAACAGGAAAAGTACAACACCGCCATT
JMFN001G07+           CACGGTTGCTGTCAGCAGCAAGAAAACTGCAGCTAACAGGAAAAGTACAACACCGCCATT
rJMFF033I09-          CACGGTTGCTGTCAGCAGCAAGAAAACTGCAGCTAACAGGAAAAGTACAACACCGCCATT
                      ____________________________________________________________
consensus             CACGGTTGCTGTCAGCAGCAAGAAAACTGCAGCTAACAGGAAAAGTACAACACCGCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           CCCTGTCCTCCATGTCTTCAAGACATAATGTGCACAGAATTCTCCATCAAAGCTGCCCAC
JMFN001G07+           CCCTGTCCTCCATGTCTTCAAGACATAATGTGCACAGAATTCTCCATCAAAGCTGCCCAC
rJMFF033I09-          CCCTGTCCTCCATGTCTTCAAGACATAATGTGCACAGAATTCTCCATCAAAGCTGCCCAC
                      ____________________________________________________________
consensus             CCCTGTCCTCCATGTCTTCAAGACATAATGTGCACAGAATTCTCCATCAAAGCTGCCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           CGAATTGTTTATCTTCATGATCTCAACCCCGTTAAGAATGGCATCCACAGCTCGTGTCAT
JMFN001G07+           CGAATTGTTTATCTTCATGATCTCAACCCCGTTAAGAATGGCATCCACAGCTCGTGTCAT
rJMFF033I09-          CGAATTGTTTATCTTCATGATCTCAACCCCGTTAAGAATGGCATCCACAGCTCGTGTCAT
JMFN006B02+                                                          CAGCTCGTGTCAT
                      ____________________________________________________________
consensus             CGAATTGTTTATCTTCATGATCTCAACCCCGTTAAGAATGGCATCCACAGCTCGTGTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005J09+           GCTCATATTTGACGGCCCCACACTAACAGTCAGAACACCCCCCGTAAGCCCCTCATCAA 
JMFN001G07+           GCTCATATTTGACGGCCCCACACTAACAGTCAGAACACCCCCCGTAAGCCCCTCATCAAC
rJMFF033I09-          GCTCATACTTGACGGCCCCACACTAACAGTCAGAACACCCCCCGTAAGCCCCTCATCAAC
JMFN006B02+           GCTCATATTTGACGGCCCCACACTAACAGTCAGAACACCCNCCGTAAGCCCCTCATCAAC
                      ____________________________________________________________
consensus             GCTCATATTTGACGGCCCCACACTAACAGTCAGAACACCCCCCGTAAGCCCCTCATCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN001G07+           AACAAAGTCAGCATAGAACGGTGAGGCAAGAATTCCGGTGATCATTGTAAGATCCAAGTT
rJMFF033I09-          AACAAAGTCAGCATAGAACGGTGAGGCAAGAATTCCGGTGATCATTGTAAGATCCAAGTT
JMFN006B02+           AACAAAGTCAGCATAGAACGGTGAGGCAAGAATTCCGGTGATCATTGTAAGATCCAAGTT
                      ____________________________________________________________
consensus             AACAAAGTCAGCATAGAACGGTGAGGCAAGAATTCCGGTGATCATTGTAAGATCCAAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN001G07+           TTCGTAAGCCATATATCCATTCACATACACATTGAAATACAGCATACCTCGTGCAGCGCT
rJMFF033I09-          TTCGTAAGCCATATATCCATTCACATACACATTGAAATACAGCATACCTCGTGCAGCGCT
JMFN006B02+           TTCGTAAGCCATATATCCATTCACATACACATTGAAATACAGCATACCTCGTGCAGCGCT
                      ____________________________________________________________
consensus             TTCGTAAGCCATATATCCATTCACATACACATTGAAATACAGCATACCTCGTGCAGCGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN001G07+           AGCTATATCACAGAAGT                                           
rJMFF033I09-          AGCTATATCACAGAAGTGCATTCTAA                                  
JMFN006B02+           AGCTATATCACAGAAGTGCATTCTAACCAAGTACTTATAACCCTCATCCACAGGAAACGC
                      ____________________________________________________________
consensus             AGCTATATCACAGAAGTGCATTCTAACCAAGTACTTATAACCCTCATCCACAGGAAACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           CCATGACATGTTTAGTGATGGGATGGAATCACTCGAGCTCTTAATAATCCGTGCTGTGTT
                      ____________________________________________________________
consensus             CCATGACATGTTTAGTGATGGGATGGAATCACTCGAGCTCTTAATAATCCGTGCTGTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           GTACATATTATCAGGACCAACCTCTCGGCTCGCCCCACCATTCTGATACTGTATATGCCC
                      ____________________________________________________________
consensus             GTACATATTATCAGGACCAACCTCTCGGCTCGCCCCACCATTCTGATACTGTATATGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           AGAATAGTAGACCTTCGACAAGCTATCATCATGAGACTTCAAGAACTCGTCATCAGGAAG
                      ____________________________________________________________
consensus             AGAATAGTAGACCTTCGACAAGCTATCATCATGAGACTTCAAGAACTCGTCATCAGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           ACAAGTTCTCCACAAAGAGTCATTAAAAGGGGTCACTTTTGGACCTCCCATACTAACTCT
                      ____________________________________________________________
consensus             ACAAGTTCTCCACAAAGAGTCATTAAAAGGGGTCACTTTTGGACCTCCCATACTAACTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           ATGAACAGTTTCAAATCCATTCTTCAATAATCCACTAATTTGTTCATTTTTCTCAGAACT
JMFS038H01+                                  TCAATAATCCACTAATNTGTTCATTTTTCTCAGAACT
                      ____________________________________________________________
consensus             ATGAACAGTTTCAAATCCATTCTTCAATAATCCACTAATTTGTTCATTTTTCTCAGAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           CACATACTGAGCTAAATCAGCAACCAAATCTTTGGGAGCTGAGATTACTTCTATGGCATT
JMFS038H01+           CACATACTGAGCTAAATCAGCAACCAAATCTTTGGGAGCTGAGATTACTTCTATGGCATT
                      ____________________________________________________________
consensus             CACATACTGAGCTAAATCAGCAACCAAATCTTTGGGAGCTGAGATTACTTCTATGGCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN006B02+           AA                                                          
JMFS038H01+           AACGAATGCAAATTTCGACTTCTTCTGGGACGAAGGTGATCACAAGCTTATCCGAATCAA
JMFF033I09+                                     GGGACGAAGGTGATCACAAGCTTATCCGAATCAA
                      ____________________________________________________________
consensus             AACGAATGCAAATTTCGACTTCTTCTGGGACGAAGGTGATCACAAGCTTATCCGAATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           CCCTAATTGTATAGTCTTTAATTACCCCGGAATTCCAAGTCTTTTCAATACTAGAACTGT
JMFF033I09+           CCCTAATTGTATAGTCTTTAATTACCCCGGAATTCCAAGTCTTTTCAATACTAGAACTGT
                      ____________________________________________________________
consensus             CCCTAATTGTATAGTCTTTAATTACCCCGGAATTCCAAGTCTTTTCAATACTAGAACTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           TCAACAGTAAATACCCGTTCGCCAAAACATAAAACTGAGCATTCGAATAATCAAGGCCGG
JMFF033I09+           TCAACAGTAAATACCCGTTCGCC-AAACATAAAACTGAGCATTCGAATAATCAAGGCCGG
                      ____________________________________________________________
consensus             TCAACAGTAAATACCCGTTCGCCAAAACATAAAACTGAGCATTCGAATAATCAAGGCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           TGTTCAGTACCTGGAAATGGAGGCGAACTAGATGAGCACCCGGATCTCTGATGCTGAACG
JMFF033I09+           TGTTCAGTACCTGGAAATGGAGGCGAACTAGATGAGCACCCGGATCTCTGATGCTGAACG
                      ____________________________________________________________
consensus             TGTTCAGTACCTGGAAATGGAGGCGAACTAGATGAGCACCCGGATCTCTGATGCTGAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           CGTACTTTGATGGCCGGGTGAAGAGCCGACCCGTGTGGTAAATCGGGGATGATCCGGGAA
JMFF033I09+           CGTACTTTGATGGCCGGGTGAAGAGCCGACCCGTGTGGTAAATCGGGGATGATCCGGGAA
                      ____________________________________________________________
consensus             CGTACTTTGATGGCCGGGTGAAGAGCCGACCCGTGTGGTAAATCGGGGATGATCCGGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           GAGGATTCGAGACGGCGAGTGATACCCCTCCGGATGAAGAGAGCAGCGGCGAATTTGAGT
JMFF033I09+           GAGGATTCGAGACGGCGAGTGATACCCCTCCGGATGAAGAGAGCAGCGGCGAATTTGAGT
                      ____________________________________________________________
consensus             GAGGATTCGAGACGGCGAGTGATACCCCTCCGGATGAAGAGAGCAGCGGCGAATTTGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           CCTCGGACGAGTCGCCGCCGAAGCGGCGGTGGTCGAGGTCAACCGTGCTGCCGTGTGACC
JMFF033I09+           CCTCGGACGAGTCGCCGCCGAAGCGGCGGTGGTCGAGGTCAACCGTGCTGCCGTGTGACC
                      ____________________________________________________________
consensus             CCTCGGACGAGTCGCCGCCGAAGCGGCGGTGGTCGAGGTCAACCGTGCTGCCGTGTGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           CGCAATTGATGAGGTAGTGGTCGATGGGAGAGAAAGCGGAGGAGGAGAGGACGAGAGTGA
JMFF033I09+           CGCAATTGATGAGGTAGTGGTCGATGGGAGAGAAAGCGGAGGAGGAGAGGACGAGAGTGA
                      ____________________________________________________________
consensus             CGCAATTGATGAGGTAGTGGTCGATGGGAGAGAAAGCGGAGGAGGAGAGGACGAGAGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS038H01+           AGAAGAGGAGGAACGAAGAAAAGCAGAGAGCGAAAG                        
JMFF033I09+           AGAAGAGGAGGAACGAAGAAAAGCAGAGAGCGAAAGGTAGCTTGAGTTTCGCCATGAGAT
                      ____________________________________________________________
consensus             AGAAGAGGAGGAACGAAGAAAAGCAGAGAGCGAAAGGTAGCTTGAGTTTCGCCATGAGAT