Contig 010257:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033C04Sequence554010257 (5)emb|CDO97985.1|1e-32unnamed protein product [Coffea canephora]760014880emb|CDO97985.1|4e-49unnamed protein product [Coffea canephora]
JMSF004I22Sequence320010257 (5)ref|XP_004252355.1|91.3PREDICTED: uncharacterized protein LOC101247111 [Solanum lycopersicum]134024458
JMSF025C06Sequence657010257 (5)gb|KDO66921.1|8e-50hypothetical protein CISIN_1g010845mg [Citrus sinensis]669004270 (3)ref|XP_010032983.1|9e-36PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochond
JMSF041A14Sequence534010257 (5)gb|KDO66921.1|4e-60hypothetical protein CISIN_1g010845mg [Citrus sinensis]634004270 (3)gb|EYU36039.1|3e-48hypothetical protein MIMGU_mgv1a004976mg [Erythranthe guttata]
JMSF043G16Sequence792010257 (5)ref|XP_009783220.1|7e-110PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochond739004270 (3)emb|CDP09204.1|1e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF043G16+                                                                TCTTCAT
                      ____________________________________________________________
consensus                                                                  TCTTCAT
 
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JMSF043G16+           CGCTAATTCCGGGCACATCAGACAGCATCAGGTTTAGGAGGAGTTTTCTCCTTATTTCTT
                      ____________________________________________________________
consensus             CGCTAATTCCGGGCACATCAGACAGCATCAGGTTTAGGAGGAGTTTTCTCCTTATTTCTT
 
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JMSF043G16+           GAGCATGGTAAACTTCCCGAAGAAAGATAGCATGTTCCATCACTCCCTTAATTCCAAAGG
                      ____________________________________________________________
consensus             GAGCATGGTAAACTTCCCGAAGAAAGATAGCATGTTCCATCACTCCCTTAATTCCAAAGG
 
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JMSF043G16+           TTAAGGCTTTTGCTCCCGCGGCAACTACCAACTTGTCATACGAGATACTGAAGTCCCATG
                      ____________________________________________________________
consensus             TTAAGGCTTTTGCTCCCGCGGCAACTACCAACTTGTCATACGAGATACTGAAGTCCCATG
 
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JMSF041A14+                           TCCATCTGTCGCTGTTTGGCACTTTATTGTATGGTTGTTGAAAT
JMSF043G16+           GCTCAGGAGTTTCAACTCCATCTGTCGCTGTTTGGCACTTTATTGTATGGTTGTTGAAAT
                      ____________________________________________________________
consensus             GCTCAGGAGTTTCAACTCCATCTGTCGCTGTTTGGCACTTTATTGTATGGTTGTTGAAAT
 
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JMSF041A14+           CAATTCCAGAACAAGTAGCAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
JMSF043G16+           CAATTCCAGAACAAGTAGCAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
JMSF025C06+                             CAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
                      ____________________________________________________________
consensus             CAATTCCAGAACAAGTAGCAAGAAAGAAATAAGAATTGGGTTCCCGGGAAATTGCGGGTT
 
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JMSF041A14+           GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
JMSF043G16+           GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
JMSF025C06+           GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
                      ____________________________________________________________
consensus             GGATCCGGCCGACAGGCTCAGCAACAGATCGGAACTCCAGAGTGCCGACGCAAGTGGAGG
 
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JMSF041A14+           CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
JMSF043G16+           CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
JMSF025C06+           CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
                      ____________________________________________________________
consensus             CCAGCAGAGGTGTGAACACCATGTGGTTCCTCGGCGACACACAAACAACATCGTATATAT
 
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JMSF041A14+           TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
JMSF043G16+           TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
JMSF025C06+           TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
                      ____________________________________________________________
consensus             TGGTGTCGATCCCCTTCATCAGCCTGCACCCCGCCCACCCCGTCCCCAGCACCACCACTC
 
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JMSF041A14+           GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCG       
JMSF043G16+           GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCGCCGCCAC
JMSF025C06+           GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCGCCGCCAC
                      ____________________________________________________________
consensus             GGGGCTTCTCATCCGCCTTCGTGGGCCCCAACCCCGCATACCTCGTCCCGCCGCCGCCAC
 
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JMSF043G16+           TCTTTGCTTCCGTACTAAACAACAGACACTGGGTTAGTGACGGCGGCGCAGCCGCCGGGA
JMSF025C06+           TCTTTGCTTCCGTACTAAACAACAGACACTGGGTTAGTGACGGCGGCGCAGCCGCCGGGA
                      ____________________________________________________________
consensus             TCTTTGCTTCCGTACTAAACAACAGACACTGGGTTAGTGACGGCGGCGCAGCCGCCGGGA
 
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JMSF043G16+           ACGCCGCCTTGAACGATGATTGTTTGCGGGTAGTGGCGGTGGTGA               
JMSF004I22+                                                       GTGGTGGTTGCCGTGG
JMSF025C06+           ACGCCGCCTTGAACGATGATTGTTTGCGGGTAGTGGCGGTGGTGATGGTGGTTGCCGTGG
JMFF033C04+                                                        TGGTGGTTGCCGCGG
                      ____________________________________________________________
consensus             ACGCCGCCTTGAACGATGATTGTTTGCGGGTAGTGGCGGTGGTGATGGTGGTTGCCGTGG
 
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JMSF004I22+           TGGAACATGAGGTTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
JMSF025C06+           TGGAACATGAGGTTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
JMFF033C04+           TGGAACATGAGGCTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
                      ____________________________________________________________
consensus             TGGAACATGAGGTTGTGGATGGCGGCTTTTCCGGCGATCTTGCCGCGCTTGAGCATTAGA
 
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JMSF004I22+           TTGAGATCAAGCATAAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCTGCC
JMSF025C06+           TTGAGATCAAGCATAAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCTGCC
JMFF033C04+           TTGAGATCAAGCATTAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCCGCC
                      ____________________________________________________________
consensus             TTGAGATCAAGCATAAGCTTCCTCTTGCATATGCCTTGCTTCAACATGAAAAGCGCTGCC
 
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JMSF004I22+           CTCACAATGCTCCAAAACTTCTTCGCTATCACCGGCAAATTGTTTGGCTCCATCTCTG  
JMSF025C06+           CTCACAATGCTCCAAAACTTCTTCGCTATCACCGGCAAATTGTTTGGCTCCATCTCTG  
JMFF033C04+           CTCACAATGCTCCAAAACTTCTTCGCTATGACTGGCAAATTGTTTGGCTCCATCTCTGAT
                      ____________________________________________________________
consensus             CTCACAATGCTCCAAAACTTCTTCGCTATCACCGGCAAATTGTTTGGCTCCATCTCTGAT
 
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JMFF033C04+           CTGATCTGTGTATAATTCTCTGTTGGAAGTGCAATATTATTTGAGGGAGAGAGAGAGATT
                      ____________________________________________________________
consensus             CTGATCTGTGTATAATTCTCTGTTGGAAGTGCAATATTATTTGAGGGAGAGAGAGAGATT
 
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JMFF033C04+           TAGACTTTAGAGAGAAAAACGAAAGAGAGGTTATTTAATTTGTTGTGATTTTCGTATGAG
                      ____________________________________________________________
consensus             TAGACTTTAGAGAGAAAAACGAAAGAGAGGTTATTTAATTTGTTGTGATTTTCGTATGAG