Contig 010256:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020O11Sequence549010256 (3)ref|XP_009804576.1|4e-66PREDICTED: WD-40 repeat-containing protein MSI4-like [Nicotiana sylvestris] ref797006848 (5)gb|ABB54381.2|9e-83FVE [Ipomoea nil]
JMFF033B06Sequence392010256 (3)ref|XP_009804576.1|6e-39PREDICTED: WD-40 repeat-containing protein MSI4-like [Nicotiana sylvestris] ref803006848 (5)gb|ABB54381.2|8e-86FVE [Ipomoea nil]
JMSF015F10Sequence264010256 (3)ref|XP_009804576.1|7e-15PREDICTED: WD-40 repeat-containing protein MSI4-like [Nicotiana sylvestris] ref796006848 (5)gb|ABB54381.2|6e-90FVE [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF020O11+ TGTCCAGTC
                      ____________________________________________________________
consensus TGTCCAGTC
 
. : . : . : . : . : . :
JMFF020O11+ AATGTCAAATCTGGGAGTGACACAGCAGCTCCAAGAACAGCCTGCCGATTAGGTTGAGCT
                      ____________________________________________________________
consensus AATGTCAAATCTGGGAGTGACACAGCAGCTCCAAGAACAGCCTGCCGATTAGGTTGAGCT
 
. : . : . : . : . : . :
JMFF020O11+ TCAACATCCCATATCAGAACTTCAGGACTATCAGTGTGGGTGGCCACTATGTTTTTATTC
                      ____________________________________________________________
consensus TCAACATCCCATATCAGAACTTCAGGACTATCAGTGTGGGTGGCCACTATGTTTTTATTC
 
. : . : . : . : . : . :
JMFF020O11+ TGAGGAAGCTCCCTGATTCTGTTCACCTCTCCTGGGTGGATAATAGTTTTGTACTTTTTG
JMFF033B06+ CCTGGGTGGATAATAGTTTTGTACTTTTTG
                      ____________________________________________________________
consensus TGAGGAAGCTCCCTGATTCTGTTCACCTCTCCTGGGTGGATAATAGTTTTGTACTTTTTG
 
. : . : . : . : . : . :
JMFF020O11+ ACATATGGTGAGCGTGCTTCTTCATTGAAATGTGCTATGTGATTCTCTGCTGCAATTCTG
JMFF033B06+ ACNTATGGTGAGCGTGCTTCTTCATTGAAATGTGCTATGTGATTCTCTGCTGCAATTCTG
                      ____________________________________________________________
consensus ACATATGGTGAGCGTGCTTCTTCATTGAAATGTGCTATGTGATTCTCTGCTGCAATTCTG
 
. : . : . : . : . : . :
JMFF020O11+ GGCCGAACCACATCACAGTTAGCTATAATCAAAGTGTTTGGTGCTGACTGATCTGTCGGC
JMFF033B06+ GGCCGAACCACATCACAGTTAGCTATAATCAAAGTGTTTGGTGCTGACTGATCTGTCGGC
                      ____________________________________________________________
consensus GGCCGAACCACATCACAGTTAGCTATAATCAAAGTGTTTGGTGCTGACTGATCTGTCGGC
 
. : . : . : . : . : . :
JMFF020O11+ AAGAGAGGGAAGGCCAGACGAGGTTATGATTAGCGAACCAGTCGTAGAGGACCGGAACCA
JMSF015F10+ GAGAGGGAAGNCCAGACGAGGTTATGATTAGCGAACCAGTCGTAGAGGACCGGAACCA
JMFF033B06+ AAGAGAGGGAAGGCCAGACGAGGTTATGATTAGCGAACCAGTCGTAGAGGACCGGAACCA
                      ____________________________________________________________
consensus AAGAGAGGGAAGGCCAGACGAGGTTATGATTAGCGAACCAGTCGTAGAGGACCGGAACCA
 
. : . : . : . : . : . :
JMFF020O11+ GCGACTTCCACTGAGCGTACTTCTCATCAACACCACCGCCGGCCTTCTTGCCACCGCCGG
JMSF015F10+ GCGACTTCCACTGAGCGTACTTCTC
JMFF033B06+ GCGACTTCCACTGAGCGTACTTCTCATCAACACCACCGCCGGCCTTCTTGCCACCGCCGG
                      ____________________________________________________________
consensus GCGACTTCCACTGAGCGTACTTCTCATCAACACCACCGCCGGCCTTCTTGCCACCGCCGG
 
. : . : . : . : . : . :
JMFF020O11+ CCCCGCCTCGCTTCCTAGAGGTGGCGCCACCGGAAGGATGCGAATCGCGTTCTCTGTCCT
JMFF033B06+ CCCCGCCTCGCTTCCTAGAGGTGGCGCCACCGGAAGGATGCGAATCGCGTTCTCTGTCCT
                      ____________________________________________________________
consensus CCCCGCCTCGCTTCCTAGAGGTGGCGCCACCGGAAGGATGCGAATCGCGTTCTCTGTCCT
 
. : . : . : . : . : . :
JMFF020O11+ CTTTGGGCTTGTTGGTTGAGCCCTTCGGCCGGCCACGCTTTCGCGGCTGCTGTTGC
JMFF033B06+ CTTTGGGCTTGTTGGTTGAGCCCTTCGGCCGGCCACGCTTTCGCGGCTGCTGTTGCAGAG
                      ____________________________________________________________
consensus CTTTGGGCTTGTTGGTTGAGCCCTTCGGCCGGCCACGCTTTCGCGGCTGCTGTTGCAGAG