Contig 010255:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032P23Sequence529010255 (5)706010255 (5)
JMFN012M06Sequence567010255 (5)
JMFN014F15Sequence638010255 (5)
JMFN031K05Sequence565010255 (5)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN012M06- GGGGATGAA
rJMFF032P23- ATTATTGGTTCCATGGCTAAACTACGGAGTAATGACGAAATGAGATTTTGGGGATGAA
                      ____________________________________________________________
consensus ATTATTGGTTCCATGGCTAAACTACGGAGTAATGACGAAATGAGATTTTGGGGATGAA
 
. : . : . : . : . : . :
JMFN031K05+ AAATTCAATACTACGTAATTATTAGTGACGAATAAAGAATAGTACAAATCATAAC
JMFN012M06- AAATTAAATTCAATACTACGTAATTATTAGTGACGAATAAAGAATAGTACAAATCATAAC
rJMFF032P23- AAATTAAATTCAATACTACGTAATTATTAGTGACGAATAAAGAATAGTACAAATCATAAC
                      ____________________________________________________________
consensus AAATTAAATTCAATACTACGTAATTATTAGTGACGAATAAAGAATAGTACAAATCATAAC
 
. : . : . : . : . : . :
JMFN031K05+ TTCTGCATACAGTGAATTGACAGCAATGAATCAGTCCAAAACAAAGTCCAAAGATCTGTG
JMFN012M06- TTCTGCATACAGTGAATTGACAGCAATGAATCAGTCCAAAACAAAGTCCAAAGATCTGTG
rJMFF032P23- TTCTGCATACAGTGAATTGACAGCAATGAATCAGTCCAAAACAAAGTCCAAAGATCTGTG
                      ____________________________________________________________
consensus TTCTGCATACAGTGAATTGACAGCAATGAATCAGTCCAAAACAAAGTCCAAAGATCTGTG
 
. : . : . : . : . : . :
JMFN031K05+ TGTATACATCATGTATATGTATTTCAGTGATTGCACAAAATGGTACGAACCTTGCAGTTA
JMFN012M06- TGTATACATCATGTATATGTATTTCAGTGATTGCACAAAATGGTACGAACCTTGCAGTTA
rJMFF032P23- TGTATACATCATGTATATGTATTTCAGTGATTGCACAAAATGGTACGAACCTTGCAGTTA
JMFN014F15+ TGCAGTTA
                      ____________________________________________________________
consensus TGTATACATCATGTATATGTATTTCAGTGATTGCACAAAATGGTACGAACCTTGCAGTTA
 
. : . : . : . : . : . :
JMFN031K05+ CAGGATGTCTCTCCGGGCGGCGTATCCGTACTGCGATCGGCGAATATTCTGCTGCCGCTT
JMFN012M06- CAGGATGTCTCTCCGGGCGGCGTATCCGTACTGCGATCGGCGAATATTCTGCTGCCGCTT
rJMFF032P23- CAGGATGTCTCTCCGGGCGGCGTATCCGTACTGCGATCGGCGAATATTCTGCTGCCGCTT
JMFN014F15+ CAGGATGTCTCTCCGGGCGGCGTATCCGTACTGCGATCGGCGAATATTCTGCTGCCGCTT
                      ____________________________________________________________
consensus CAGGATGTCTCTCCGGGCGGCGTATCCGTACTGCGATCGGCGAATATTCTGCTGCCGCTT
 
. : . : . : . : . : . :
JMFN031K05+ CTTGTAAACCAGCGCGCCGAGCCCTACGACGCACACGCCGGCGATGACTCCGACAGCGAT
JMFN012M06- CTTGTAAACCAGCGCGCCGAGCCCTACGACGCACACGCCGGCGATGACTCCGACAGCGAT
rJMFF032P23- CTTGTAAACCAGCGCGCCGAGCCCTACGACGCACACGCCGGCGATGACTCCGACAGCGAT
JMFN014F15+ CTTGTAAACCAGCGCGCCGAGCCCTACGACGCACACGCCGGCGATGACTCCGACAGCGAT
                      ____________________________________________________________
consensus CTTGTAAACCAGCGCGCCGAGCCCTACGACGCACACGCCGGCGATGACTCCGACAGCGAT
 
. : . : . : . : . : . :
JMFN031K05+ GCCTGCTTTCTTACCTCCGATCATTCCACCGCCGGAAGATTCACCAGCCTGTAACTCGCT
JMFN012M06- GCCTGCTTTCTTACCTCCGCTCATTCCACCGCCGGAAGATTCACCAGCCTGTAACTCGCT
rJMFF032P23- GCCTGCTTTCTTACCTCCGCTCATTCCACCGCCGGAAGATTCACCAGCCTGTAACTCGCT
JMFN014F15+ GCCTGCTTTCTTACCTCCGCTCATTCCACCGCCGGAAGATTCACCAGCCTGTAACTCGCT
JMFF032P23+ TACCTCCGCTCATTCCACCGCCGGAAGATTCACCAGCCTGTAACTCGCT
                      ____________________________________________________________
consensus GCCTGCTTTCTTACCTCCGCTCATTCCACCGCCGGAAGATTCACCAGCCTGTAACTCGCT
 
. : . : . : . : . : . :
JMFN031K05+ TGCGTGGCTAACATCGTTTGCATCATCAGCATCGGGAGCTGGAGCAGGGAACGGAGACGG
JMFN012M06- TGCGTGGCTAACATCGTTTGCATCATCAGCATCGGGAGCTGGAGCAGGGAACGGAGACGG
rJMFF032P23- TGCGTGGCTAACATCGTTTGCATCATCAGCATCGGGAGCTGGAGCAGGGAACGGAGACGG
JMFN014F15+ TGCGTGGCTAACATCGTTTGCATCATCAGCATCGGGAGCTGGAGCAGGGAACGGAGACGG
JMFF032P23+ TGCGTGGCTAACATCGTTTGCATCATCAGCATCGGGAGCTGGAGCAGGGAACGGAGACGG
                      ____________________________________________________________
consensus TGCGTGGCTAACATCGTTTGCATCATCAGCATCGGGAGCTGGAGCAGGGAACGGAGACGG
 
. : . : . : . : . : . :
JMFN031K05+ AGTAGACTCCTCCGACGGCGAAGCGTTAGCGTTTCCTGGAGACGGAGCTGGAGAAGCAGG
JMFN012M06- AGTAGACTCCTCCGACGGCGAAGCGTTAGCGTTTCCTGGAGACGGAGCTGGAGAAGCAGG
rJMFF032P23- AGTAGACTCCTCCGACGGCGAAGCGTTAGCGTTTCCTGGAGACGGAGCTGGAGAAGCAGG
JMFN014F15+ AGTAGACTCCTCCGACGGCGAAGCGTTAGCGTTTCCTGGAGACGGAGCTGGAGAAGCAGG
JMFF032P23+ AGTAGACTCCTCCGACGGCGAAGCGTTAGCGTTTCCTGGAGACGGAGCTGGAGAAGCAGG
                      ____________________________________________________________
consensus AGTAGACTCCTCCGACGGCGAAGCGTTAGCGTTTCCTGGAGACGGAGCTGGAGAAGCAGG
 
. : . : . : . : . : . :
JMFN031K05+ CGGAGGCGACGGGGGAGAGCTAACGACGGGTGCAGGTGCTGGAGACCGGTCAACCGGAGA
JMFN012M06- CGGAGGCGACGGGGGAGAGCTAACGACGGGTGCAGGTGCTGG
rJMFF032P23- CGGAGGCGACGGGGGAGAGCTAACGACGGGTGCAGGTGCTGGAGACCGGTCAACCGGAGA
JMFN014F15+ CGGAGGCGACGGGGGAGAGCTAACGACGGGTGCAGGTGCTGGAGACCGGTCAACCGGAGA
JMFF032P23+ CGGAGGCGACGGGGGAGAGCTAACGACGGGTGCAGGTGCTGGAGACCGGTCAACCGGAGA
                      ____________________________________________________________
consensus CGGAGGCGACGGGGGAGAGCTAACGACGGGTGCAGGTGCTGGAGACCGGTCAACCGGAGA
 
. : . : . : . : . : . :
JMFN031K05+ AGGCGGAGTAGCCTGCGGAGAGGAACCTAC
rJMFF032P23- AGGCGGAGTAGCCTGCGGAGAGGAACCTACATCGGCGCCGGATTCTGGTGCCGGCGCCGG
JMFN014F15+ AGGCGGAGTAGCCTGCGGAGAGAAACCTACATCGGCGCCGGATTCTGGTGCCGGCGCCGG
JMFF032P23+ AGGCGGAGTAGCCTGCGGAGAGGAACCTACATCGGCGCCGGATTCTGGTGCCGGCGCCGG
                      ____________________________________________________________
consensus AGGCGGAGTAGCCTGCGGAGAGGAACCTACATCGGCGCCGGATTCTGGTGCCGGCGCCGG
 
. : . : . : . : . : . :
rJMFF032P23- CGATGGCGCATGTGAAGCGAGAACATGCTGAGTAGAGAACAGCTCCAC
JMFN014F15+ CGATGGCGCATGTGAAGCGAGAACATGCTGAGTAGAGAACAGCTCCACGAAGAGAATCGC
JMFF032P23+ CGATGGCCGCTGTGAAGCGAGAACATGCTGAGTAGAGAACAGCTCCACGAAGAGAATCGC
                      ____________________________________________________________
consensus CGATGGCGCATGTGAAGCGAGAACATGCTGAGTAGAGAACAGCTCCACGAAGAGAATCGC
 
. : . : . : . : . : . :
JMFN014F15+ AAGGAATAGCGTTCGAAGCGCCGCCATTGCCGCCGACATCTTAGCTAGTTAGCTCTGCAA
JMFF032P23+ AAGGAATAGCGTTCGAAGCGCCGCCATTGCCGCCGACATCTTAGCTAGTTAGCTCTGCAA
                      ____________________________________________________________
consensus AAGGAATAGCGTTCGAAGCGCCGCCATTGCCGCCGACATCTTAGCTAGTTAGCTCTGCAA
 
. : . : . : . : . : . :
JMFN014F15+ ATGTGACTG
JMFF032P23+ ATGTGACTGAAAAAAACGAAGCAATAACAGATCAGTGGTAGGAAATCAAGCTCCAGAAGT
                      ____________________________________________________________
consensus ATGTGACTGAAAAAAACGAAGCAATAACAGATCAGTGGTAGGAAATCAAGCTCCAGAAGT
 
. : . : . : . : . : . :
JMFF032P23+ TCAGATCTGAAGAAAAACAGAGATTGTTCTCAGCAAAAAATGGCGATTATTCGCGAATCT
                      ____________________________________________________________
consensus TCAGATCTGAAGAAAAACAGAGATTGTTCTCAGCAAAAAATGGCGATTATTCGCGAATCT