Contig 010244:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012P18Sequence139010244 (3)653009818 (3)ref|XP_009594285.1|2e-79PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Nicotiana to
JMFF028L19Sequence280010244 (3)636009818 (3)ref|XP_009594285.1|1e-78PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Nicotiana to
JMFF046O11Sequence592010244 (3)gb|KDP33521.1|2e-50hypothetical protein JCGZ_07092 [Jatropha curcas]637009818 (3)ref|XP_004245209.1|4e-56PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Solanum lyco

Alignment

This contig is upended


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JMFF046O11+                                                          TCCCTTTGGCCAC
                      ____________________________________________________________
consensus                                                            TCCCTTTGGCCAC
 
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JMFF046O11+           CTTAGCGAACAACTCCCCGCCTTTCACGTGCTCCATCACGAAGAAGATCTTGGTCTTCGT
                      ____________________________________________________________
consensus             CTTAGCGAACAACTCCCCGCCTTTCACGTGCTCCATCACGAAGAAGATCTTGGTCTTCGT
 
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JMFF046O11+           GGCCAGGACTTCCCGGAGCTCCACCACGTGAGGGTGGCGCACCAGCCGCATCACCGCAAT
                      ____________________________________________________________
consensus             GGCCAGGACTTCCCGGAGCTCCACCACGTGAGGGTGGCGCACCAGCCGCATCACCGCAAT
 
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JMFF046O11+           CTCTCTCGTGATCTGCTCCATCATCCCTTCCTTCTTCACCTGATCTTTGCTCAGCACCTT
                      ____________________________________________________________
consensus             CTCTCTCGTGATCTGCTCCATCATCCCTTCCTTCTTCACCTGATCTTTGCTCAGCACCTT
 
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JMFF046O11+           GATCGCCACGCCGTCGCCGGTGGCCACCTCTTTGCCGTAGTAAACCTTAGCAAAAGTGCC
                      ____________________________________________________________
consensus             GATCGCCACGCCGTCGCCGGTGGCCACCTCTTTGCCGTAGTAAACCTTAGCAAAAGTGCC
 
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JMFF046O11+           TTTACCCAACAACCGGCCTTTCTCGTATTTCCCGAACAACATTTGACTCTCACCCATGCT
                      ____________________________________________________________
consensus             TTTACCCAACAACCGGCCTTTCTCGTATTTCCCGAACAACATTTGACTCTCACCCATGCT
 
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JMFF046O11+           CAATCAATCTAATCTCCACACAATTGAACCAAATCAAAAACAAATTTCTAGCGATTCTTC
JMFF028L19+                               CAATTGAACCAAATCAAAAACAAATTTTTAGNGATTTTTC
                      ____________________________________________________________
consensus             CAATCAATCTAATCTCCACACAATTGAACCAAATCAAAAACAAATTTTTAGCGATTTTTC
 
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JMFF046O11+           AACTATCTTTGAAACCCATATTTGGAAATTAGGCTAGAAGGGTAGTGAGATCATCAAATG
JMFF028L19+           AACTATTTTTGAAACCCATNTTTGGAAATTNGGNTAGAAGGGTAGTGAGATCATCAAATG
                      ____________________________________________________________
consensus             AACTATTTTTGAAACCCATATTTGGAAATTAGGCTAGAAGGGTAGTGAGATCATCAAATG
 
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JMFF046O11+           GGATTTGAATTGAATATGGTCATGATTCTTGGGGTGAAAATTAAAGGTTTTAGCTTTAAG
JMFF012P18+                                                      AAGGTTTTAGCTTTAAG
JMFF028L19+           GGATTTGAATTGAATATGGTCANGATTNTTGGGGNGAAAATTAAAGGTTTTAGCTTTAAG
                      ____________________________________________________________
consensus             GGATTTGAATTGAATATGGTCATGATTCTTGGGGTGAAAATTAAAGGTTTTAGCTTTAAG
 
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JMFF046O11+           AAAAAAAAAAAGTTCGAATGGATCAATAGGGATCGGAGTTAAGAAATTGTAGAAGAGAGT
JMFF012P18+           AAAAAAAAAAAGTTCGAATGGATCAATAGGGATCGGAGTTAAGAAATTGTAGAAGAGAGT
JMFF028L19+           AAAAAAAAAAAGTTCGAATGGATCAATAGGGATCGGAGTTAAGAAATTGTAGAAGAGAGT
                      ____________________________________________________________
consensus             AAAAAAAAAAAGTTCGAATGGATCAATAGGGATCGGAGTTAAGAAATTGTAGAAGAGAGT
 
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JMFF046O11+           TAGGAAGGAAGAAGGAAATTAGTTAAGTTCTGCTGGTTT                     
JMFF012P18+           TAGGAAGGAAGAAGGAAATTAGTTAAGTTCTGCTGGTTTCTAAAATGGTGATGTGTCCAT
JMFF028L19+           TAGGAAGGAAGAAGGAAATTAGTTAAGTTCTGCTGGTTTCTAAAATGGTGATGTGTCCAT
                      ____________________________________________________________
consensus             TAGGAAGGAAGAAGGAAATTAGTTAAGTTCTGCTGGTTTCTAAAATGGTGATGTGTCCAT