Contig 010243:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF028L09-          TGTTTACTTGAAACAGAAGCCATGACCATTCATAATTTGCACTACTCACAATACATTCTA
                      ____________________________________________________________
consensus             TGTTTACTTGAAACAGAAGCCATGACCATTCATAATTTGCACTACTCACAATACATTCTA
 
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rJMCP010D01+                                           CACAGCACTATAgttgggTACATACAT
rJMFF028L09-          CAGACAGAAATCAAACTATCATAAAAGGTACCACACAGCACTATACAACCCTACATACAT
                      ____________________________________________________________
consensus             CAGACAGAAATCAAACTATCATAAAAGGTACCACACAGCACTATACAACCCTACATACAT
 
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rJMCP010D01+          TTTGAACTATGCTGCTCAAAACAACACTGAGCAGAATGCATAATCAGCTTTATTGAAAGA
rJMFF028L09-          TTTGAACTATGCTGCTCAAAACAACACTGAGCAGAATGCATAATCAGCTTTATTGAAAGA
                      ____________________________________________________________
consensus             TTTGAACTATGCTGCTCAAAACAACACTGAGCAGAATGCATAATCAGCTTTATTGAAAGA
 
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rJMCP010D01+          CGTTTACTCGAATAGAAACGACTTGAGTTGTTTAAACACGAGGTCGGGATTCTGAACCCC
rJMFF028L09-          CGTTTACTCGAATAGAAACGACTTGAGTTGTTTAAACACGAGGTCGGGATTCTGAACCCC
                      ____________________________________________________________
consensus             CGTTTACTCGAATAGAAACGACTTGAGTTGTTTAAACACGAGGTCGGGATTCTGAACCCC
 
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rJMCP010D01+          AGGTGTACGTACGGTTCTTGGAAGACTCG                               
rJMFF028L09-          AGGTGTACGTACGGTTCTTGGAAGACTCGACTCTGTGGATGCAGATACCAATGCAGTATA
                      ____________________________________________________________
consensus             AGGTGTACGTACGGTTCTTGGAAGACTCGACTCTGTGGATGCAGATACCAATGCAGTATA
 
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rJMFF028L09-          CCCCCGAAAAGAAAAAATCAAATACCATTAACTCACTAAACATCACACTTCATGCAATCC
                      ____________________________________________________________
consensus             CCCCCGAAAAGAAAAAATCAAATACCATTAACTCACTAAACATCACACTTCATGCAATCC
 
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rJMFF028L09-          CTCCCTCCCTATATCCTCCCCCCTTTATTTTTCTTCAAATTTTGGAAACAAAAAACCACA
                      ____________________________________________________________
consensus             CTCCCTCCCTATATCCTCCCCCCTTTATTTTTCTTCAAATTTTGGAAACAAAAAACCACA
 
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rJMFF028L09-          ACTTGAGCTTGTATCTGATAAATTCAGTTTCATGGGAGGTGACAAAAAGAGCGATCACGC
                      ____________________________________________________________
consensus             ACTTGAGCTTGTATCTGATAAATTCAGTTTCATGGGAGGTGACAAAAAGAGCGATCACGC
 
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rJMFF028L09-          TCGCAGTGACGCATTCTTCTTAAGCAAAGCATAGGCGTCGCTGTATACAGCCACCACATT
JMFF028L09+                                                                   CATT
                      ____________________________________________________________
consensus             TCGCAGTGACGCATTCTTCTTAAGCAAAGCATAGGCGTCGCTGTATACAGCCACCACATT
 
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rJMFF028L09-          AGAGAACACAGCAAGGATGATCATAAAGGTGGATAAGATCTTATCCTTTCTTGTTGCTAT
JMFF028L09+           AGAGAACACAGCAAGGATGATCATAAAGGTGGATAAGATCTTATCCTTTCTTGTTGCTAT
                      ____________________________________________________________
consensus             AGAGAACACAGCAAGGATGATCATAAAGGTGGATAAGATCTTATCCTTTCTTGTTGCTAT
 
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rJMFF028L09-          GCCATACCGGTCCCTCAGAGTAACAGCAGCGGGGAATATGAAGCCAATGCAAACAGCAGC
JMFF028L09+           GCCATACCGGTCCCTCAGAGTAACAGCAGCGGGGAATATGAAGCCAATGCAAACAGCAGC
                      ____________________________________________________________
consensus             GCCATACCGGTCCCTCAGAGTAACAGCAGCGGGGAATATGAAGCCAATGCAAACAGCAGC
 
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rJMFF028L09-          TGTTGCTCCCGTGAATTGGAAAGCGTCCCAAATGCTGGGG                    
JMFF028L09+           TGTTGCTCCCGTGAATTGGAAAGCGTCCCAAATGCTGGGGATGAAATTTGCGCCGAGGAA
                      ____________________________________________________________
consensus             TGTTGCTCCCGTGAATTGGAAAGCGTCCCAAATGCTGGGGATGAAATTTGCGCCGAGGAA
 
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JMFF028L09+           GATGACAACTAAAAGCCCAGTGCTGATTGACGCAAACCTCAAATTGTGTTGTTCTAAAGG
                      ____________________________________________________________
consensus             GATGACAACTAAAAGCCCAGTGCTGATTGACGCAAACCTCAAATTGTGTTGTTCTAAAGG
 
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JMFF028L09+           CCTTGCAGATGGAAAGACCAGACCATCCAAGTTCAGTCGCAAGGGATAGAAGACGATCGG
                      ____________________________________________________________
consensus             CCTTGCAGATGGAAAGACCAGACCATCCAAGTTCAGTCGCAAGGGATAGAAGACGATCGG
 
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JMFF028L09+           AAAGACCAGCATTAAGTGTGCAGCATAGCTAACACGAACAATATCATTGAGAACAGAACC
                      ____________________________________________________________
consensus             AAAGACCAGCATTAAGTGTGCAGCATAGCTAACACGAACAATATCATTGAGAACAGAACC
 
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JMFF028L09+           GAATGGGATTCCCAGATCGGCGTCAAAGTTTGCGAGCACGTCATCAAGAGTTGCATCGCC
                      ____________________________________________________________
consensus             GAATGGGATTCCCAGATCGGCGTCAAAGTTTGCGAGCACGTCATCAAGAGTTGCATCGCC
 
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JMFF028L09+           AAATAGGAGGAATCCAAAGATGCTTGTCAAGACATACACACTTGAGCAAAGTGTGAGTGA
                      ____________________________________________________________
consensus             AAATAGGAGGAATCCAAAGATGCTTGTCAAGACATACACACTTGAGCAAAGTGTGAGTGA
 
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JMFF028L09+           AGCTCGAACAACAGCTTTAATCTGTGTACTGTCCTCAAGTTCGTTGTCAATGGTATGAAC
                      ____________________________________________________________
consensus             AGCTCGAACAACAGCTTTAATCTGTGTACTGTCCTCAAGTTCGTTGTCAATGGTATGAAC