Contig 010234:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025J13Sequence561010234 (2)ref|XP_006339897.1|96.7PREDICTED: uncharacterized protein LOC102592626 [Solanum tuberosum]540016973ref|XP_002282505.1|233PREDICTED: uncharacterized protein LOC100262755 [Vitis vinifera]
JMFS011B05Sequence516010234 (2)ref|XP_004232030.1|101PREDICTED: uncharacterized protein LOC101268531 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF025J13+                                                 TCAGAGCATTTCTAGCGATTTT
                      ____________________________________________________________
consensus                                                   TCAGAGCATTTCTAGCGATTTT
 
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JMFF025J13+           GATTGCCTTTTCCGGGTCGGACGGTCTGGAGCCCCAGGACTTGGACCAGAGAGCGTTCCG
                      ____________________________________________________________
consensus             GATTGCCTTTTCCGGGTCGGACGGTCTGGAGCCCCAGGACTTGGACCAGAGAGCGTTCCG
 
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JMFF025J13+           GGCAATATGGAAAGAGATGGCGGCAATCGGGAGCTCAATGGACGCGCGGAGCTGGAGACG
                      ____________________________________________________________
consensus             GGCAATATGGAAAGAGATGGCGGCAATCGGGAGCTCAATGGACGCGCGGAGCTGGAGACG
 
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JMFS011B05+                            CCGCCAGTCGGGGAACCCAGGACCCATCGGCAGGCTGTCGGAG
JMFF025J13+           CGCGGCCCCCGAAGGACCCGCCAGTCGGGGAAGCCAGGACCCAGCGGCAGGCCGGCGGAG
                      ____________________________________________________________
consensus             CGCGGCCCCCGAAGGACCCGCCAGTCGGGGAAGCCAGGACCCATCGGCAGGCTGTCGGAG
 
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JMFS011B05+           AGGATCGCTTTCAGGTCGGGAGGCACAAGCAGCGTTAAACTCAGGTTCCGCTCTCGCAAA
JMFF025J13+           AGGATCGCTTTGAGGTCGGGAGGGA-AAGCAAACTTAAACTCAGCTTCCGCTCTCGCAAA
                      ____________________________________________________________
consensus             AGGATCGCTTTGAGGTCGGGAGGGACAAGCAGCGTTAAACTCAGGTTCCGCTCTCGCAAA
 
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JMFS011B05+           GTCAGATTCCGGCAACCCACGCTCCACGTAAACCCCAGACTTTTTAAGGTGGGTAACGTC
JMFF025J13+           CTCAGATTCCGACAACCCACGCTCCACCTGAACCCCAGACTTTTTAAGGTGGGTAATGAC
                      ____________________________________________________________
consensus             GTCAGATTCCGGCAACCCACGCTCCACGTGAACCCCAGACTTTTTAAGGTGGGTAATGTC
 
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JMFS011B05+           TTTATCGGCGAGAGTAGTCAAGGACAGCAGGCTGTTC                       
JMFF025J13+           TTTATCGGCGAGAGTAGTGAAGGACAGCAGGCTGTTCCGAGGAGGAACGGGCGTCGCTGG
                      ____________________________________________________________
consensus             TTTATCGGCGAGAGTAGTGAAGGACAGCAGGCTGTTCCGAGGAGGAACGGGCGTCGCTGG
 
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JMFF025J13+           GCTGGGCGCCGCCGCCCTGGCTGATAGACGACGGAGTCCGGCTAAGTGAGCCGGGTTCAG
                      ____________________________________________________________
consensus             GCTGGGCGCCGCCGCCCTGGCTGATAGACGACGGAGTCCGGCTAAGTGAGCCGGGTTCAG
 
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JMFF025J13+           ACCGGCCATCCTCCGGTCAACGTCGACCATCGTGGTCTCCAAAACTATAGTTTCAAGAAA
                      ____________________________________________________________
consensus             ACCGGCCATCCTCCGGTCAACGTCGACCATCGTGGTCTCCAAAACTATAGTTTCAAGAAA
 
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JMFF025J13+           AACTTGACGCCGGAAACGATGGAAGGCCGGAAAGTGCAATGGAGGATCGGAAGAGGGAGC
                      ____________________________________________________________
consensus             AACTTGACGCCGGAAACGATGGAAGGCCGGAAAGTGCAATGGAGGATCGGAAGAGGGAGC