Contig 010231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024O09Sequence564010231 (2)781010231 (2)ref|XP_009767492.1|1e-63PREDICTED: uncharacterized protein At5g64816-like [Nicotiana sylvestris] ref|XP

Alignment

This contig is upended


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rJMFF024O09-                                                TGGAGTATAACATCGAAATACA
                      ____________________________________________________________
consensus                                                   TGGAGTATAACATCGAAATACA
 
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rJMFF024O09-          TGATCCACAGTTTCNATGGCTGGGTATCCTTCATTAGAGGTCTTCAACACAGTTCTTGAA
                      ____________________________________________________________
consensus             TGATCCACAGTTTCNATGGCTGGGTATCCTTCATTAGAGGTCTTCAACACAGTTCTTGAA
 
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rJMFF024O09-          GAAATGCGGGAGCANAAAAAGAAAAAATGGTTGCGGATCAAGACAAAGAAGAAGTTGAGA
                      ____________________________________________________________
consensus             GAAATGCGGGAGCANAAAAAGAAAAAATGGTTGCGGATCAAGACAAAGAAGAAGTTGAGA
 
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rJMFF024O09-          GGCGAAGGCACTCACTTTGACACCTCTTCAGGCAAATGTCATTCCAGTTAGGCACTTGAT
                      ____________________________________________________________
consensus             GGCGAAGGCACTCACTTTGACACCTCTTCAGGCAAATGTCATTCCAGTTAGGCACTTGAT
 
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rJMFF024O09-          GCTGGTTAACACACACCGTCCGTGCACATGCGTCAGCGCAAGCATCGAGCTCGGAAACAC
                      ____________________________________________________________
consensus             GCTGGTTAACACACACCGTCCGTGCACATGCGTCAGCGCAAGCATCGAGCTCGGAAACAC
 
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rJMFF024O09-          CACAAACAGTGACACAGGTATCGGGCATTGGGTCTTTAGAAAATGCACCAACCTTCTTCA
                      ____________________________________________________________
consensus             CACAAACAGTGACACAGGTATCGGGCATTGGGTCTTTAGAAAATGCACCAACCTTCTTCA
 
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rJMFF024O09-          ACATCCTCTTCGAAGTACAAACCCTCTCGCACACAAATATATCATCTGAGTTCTTTTCGC
                      ____________________________________________________________
consensus             ACATCCTCTTCGAAGTACAAACCCTCTCGCACACAAATATATCATCTGAGTTCTTTTCGC
 
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rJMFF024O09-          GTCCTCTGGCCCTCTTTAGCCTCTGCTCATCATCTCGTCTCTTCTTCATCCTGAAAGCTT
                      ____________________________________________________________
consensus             GTCCTCTGGCCCTCTTTAGCCTCTGCTCATCATCTCGTCTCTTCTTCATCCTGAAAGCTT
 
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rJMFF024O09-          GACCTGCCAGTACAGCTGGAACAGCTGCCCCCAGTAAAGACCACCATAATTCCACCATCA
                      ____________________________________________________________
consensus             GACCTGCCAGTACAGCTGGAACAGCTGCCCCCAGTAAAGACCACCATAATTCCACCATCA
 
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rJMFF024O09-          CTGCTGCTTGAAAACTAAATTCTTGGACCTCTTTGTTTATAGTCTTGCCCTTCCAAGTCA
JMFF024O09+                                                 ATAGTCTTGCCCTTCCAAGTCA
                      ____________________________________________________________
consensus             CTGCTGCTTGAAAACTAAATTCTTGGACCTCTTTGTTTATAGTCTTGCCCTTCCAAGTCA
 
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rJMFF024O09-          ATGAAACCATTATGGAGGAGTTTTCTTAATGTAGCCCAGAGTTGAGTTGTCCACTTAATA
JMFF024O09+           ATGAAACCATTATGGAGGAGTTTTCTTAATGTAGCCCAGAGTTGAGTTGTCCACTTAATA
                      ____________________________________________________________
consensus             ATGAAACCATTATGGAGGAGTTTTCTTAATGTAGCCCAGAGTTGAGTTGTCCACTTAATA
 
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rJMFF024O09-          GCTTCCAGCAGCCCTCCTCATATTTGAACCTATAGNCATCCTCCACTTAATACCAAGCTC
JMFF024O09+           GCTTCCAGCAGCCCTCCTCATATTTGAACCTATAGCCATCCTCCACTTAATACCAAGCTC
                      ____________________________________________________________
consensus             GCTTCCAGCAGCCCTCCTCATATTTGAACCTATAGCCATCCTCCACTTAATACCAAGCTC
 
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rJMFF024O09-          TGGTCCCCCTCAATTCTTCCAAGAACTCACTTGAATAGATTGTTAAATTTTGGAGCCTGG
JMFF024O09+           TGGTCCCCCTCAATTCTTCCAAGAACTCACTTGAATAGATTGTTAAATTTTGGAGCCTGG
                      ____________________________________________________________
consensus             TGGTCCCCCTCAATTCTTCCAAGAACTCACTTGAATAGATTGTTAAATTTTGGAGCCTGG
 
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rJMFF024O09-          AGACTTGGATTTATGGAATCTGGATTCTGGAGTATGAAG                     
JMFF024O09+           AGACTTGGATTTATGGAATCTGGATTCTGGAGTATGAAGAAACACCTAGATAGTTGGAAC
                      ____________________________________________________________
consensus             AGACTTGGATTTATGGAATCTGGATTCTGGAGTATGAAGAAACACCTAGATAGTTGGAAC
 
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JMFF024O09+           TTGGAAGAAGGGAAGAACCAAGAATTTGAGAATCTGAGATGGGTGAGGGCGTGATTCGTG
                      ____________________________________________________________
consensus             TTGGAAGAAGGGAAGAACCAAGAATTTGAGAATCTGAGATGGGTGAGGGCGTGATTCGTG
 
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JMFF024O09+           AGGCTGAGGCGCTGAGCGACGACCGGCGACTCGGCGCGAGGCAGTGAGCCAGTGAGGCCA
                      ____________________________________________________________
consensus             AGGCTGAGGCGCTGAGCGACGACCGGCGACTCGGCGCGAGGCAGTGAGCCAGTGAGGCCA
 
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JMFF024O09+           GAATACGAGAGGGCTGGCGCCTGGCGGAGGGGCGGGCTGCGACTCCTCTCTCGCCGGAGA
                      ____________________________________________________________
consensus             GAATACGAGAGGGCTGGCGCCTGGCGGAGGGGCGGGCTGCGACTCCTCTCTCGCCGGAGA
 
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JMFF024O09+           GGGCTGCGCGGCTGGCCAGATTTTAGGGACTACTGGACTAGGGTTCGATAAATCGCGATG
                      ____________________________________________________________
consensus             GGGCTGCGCGGCTGGCCAGATTTTAGGGACTACTGGACTAGGGTTCGATAAATCGCGATG
 
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JMFF024O09+           GGATGAGAGATTGAGATGAGAGCCAGAAGACAATGAAAAATTTGTTAGATGAGAGGTTAC
                      ____________________________________________________________
consensus             GGATGAGAGATTGAGATGAGAGCCAGAAGACAATGAAAAATTTGTTAGATGAGAGGTTAC