Contig 010228:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024A11Sequence517010228 (2)ref|XP_004240170.1|5e-48PREDICTED: probable serine/threonine-protein kinase WNK11 isoform X1 [Solanum l741010228 (2)ref|XP_009762151.1|3e-128PREDICTED: probable serine/threonine-protein kinase WNK11 [Nicotiana sylvestris

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-            GTCCCTTATAGGGGTAATCAAACAAACTTAAAAACGAATCCTTTCTAAACAATCAATC
                      ____________________________________________________________
consensus               GTCCCTTATAGGGGTAATCAAACAAACTTAAAAACGAATCCTTTCTAAACAATCAATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          CAATAAGTCAAATAACCATTTTATTTTAAGTAACCAAAGCTCAACAGTTTCTTAAAAACT
                      ____________________________________________________________
consensus             CAATAAGTCAAATAACCATTTTATTTTAAGTAACCAAAGCTCAACAGTTTCTTAAAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          CGATAAGGAATCGTATCAATCACACGTAACAATATCTTGAAAGAATGGGTCCTTGAGCAA
                      ____________________________________________________________
consensus             CGATAAGGAATCGTATCAATCACACGTAACAATATCTTGAAAGAATGGGTCCTTGAGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          GTCTGATGCAGATGGCCTGGCTCTTGGTTGCCCAATACACTTCTCAATGAAGTCTTTCAA
                      ____________________________________________________________
consensus             GTCTGATGCAGATGGCCTGGCTCTTGGTTGCCCAATACACTTCTCAATGAAGTCTTTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          TTCTGGGTCCTTCACCTTGTTCAGAGCTCGAGGCTTCACGCCGGCGGTCACCTTCTTGTA
                      ____________________________________________________________
consensus             TTCTGGGTCCTTCACCTTGTTCAGAGCTCGAGGCTTCACGCCGGCGGTCACCTTCTTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          TATTTTCGCTATACTGTCACACTCGCTGTAGGGTATCTCCAAGGTCGCCATTTCCAGTAA
                      ____________________________________________________________
consensus             TATTTTCGCTATACTGTCACACTCGCTGTAGGGTATCTCCAAGGTCGCCATTTCCAGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          GCACATCCCAAAGGAGTAAATATCCACAAGTTCTGTATAGTTCTCTTCATAAAGCTCTGG
                      ____________________________________________________________
consensus             GCACATCCCAAAGGAGTAAATATCCACAAGTTCTGTATAGTTCTCTTCATAAAGCTCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          TGCCATGTACTCTGGAGTCCCTAGCAGTGTATGCGCCGCATGGTTCTTTGCAACAATGGC
                      ____________________________________________________________
consensus             TGCCATGTACTCTGGAGTCCCTAGCAGTGTATGCGCCGCATGGTTCTTTGCAACAATGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          CGCCATGCCTAAATCCCCAATCTTTACCTTTCCAATGTTGCCATTGATGAAAATGTTGCT
                      ____________________________________________________________
consensus             CGCCATGCCTAAATCCCCAATCTTTACCTTTCCAATGTTGCCATTGATGAAAATGTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          GCAGTTGAGGTCTCTGTGGATGACGCAGGGATCATGGGTGTGGAGATACTCCAAGCCTTG
                      ____________________________________________________________
consensus             GCAGTTGAGGTCTCTGTGGATGACGCAGGGATCATGGGTGTGGAGATACTCCAAGCCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          AAGTATCTGTCTGGACCACTTCTTGATCGCCTTGACGGAGACATGGCGGTGCTTGTTCCG
JMFF024A11+                                  TGATCGCCTTGACGGAGACATGGCGGTGCTTGTTCCG
                      ____________________________________________________________
consensus             AAGTATCTGTCTGGACCACTTCTTGATCGCCTTGACGGAGACATGGCGGTGCTTGTTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          GTAATCCCTGAGGTTGCCGGAGGCGCACGCCTCGGTTATGAAATTCAGGATGTTGTGCTC
JMFF024A11+           GTAATCCCTGAGGTTGCCGGAGGCGCACGCCTCGGTTATGAAATTCAGGATGTTGTGCTC
                      ____________________________________________________________
consensus             GTAATCCCTGAGGTTGCCGGAGGCGCACGCCTCGGTTATGAAATTCAGGATGTTGTGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024A11-          CTCGTCCTTCCAGAAATGATACA                                     
JMFF024A11+           CTCGTCCTTCCAGAAATGATACATGACGATGATGTTCTCGTTCTTCAAGCTTTTAGCAGC
                      ____________________________________________________________
consensus             CTCGTCCTTCCAGAAATGATACATGACGATGATGTTCTCGTTCTTCAAGCTTTTAGCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024A11+           TCAATCTCGGAGTGGATCTTGCTAATGATGCACGGATTGTCCATGAACTTTCTCAGCTTA
                      ____________________________________________________________
consensus             TCAATCTCGGAGTGGATCTTGCTAATGATGCACGGATTGTCCATGAACTTTCTCAGCTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024A11+           ATCTGGTTCCACGCCACGTCTCGCCCTTCCTCCAAATCGAACGCTCTGTGCACGTTCTTC
                      ____________________________________________________________
consensus             ATCTGGTTCCACGCCACGTCTCGCCCTTCCTCCAAATCGAACGCTCTGTGCACGTTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024A11+           ACCGACCCGTGCCCCAGGAGCTCCTCGTACCGCCCAAACCGCCCCGACGGATCAACCTCC
                      ____________________________________________________________
consensus             ACCGACCCGTGCCCCAGGAGCTCCTCGTACCGCCCAAACCGCCCCGACGGATCAACCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024A11+           GCAAACGCCTCGCCATCTTCGTCACCACTGGAAAATGGCATTATTATAACGGACCAAATA
                      ____________________________________________________________
consensus             GCAAACGCCTCGCCATCTTCGTCACCACTGGAAAATGGCATTATTATAACGGACCAAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024A11+           TAAGAAAATAAAGTTGTGTTAGGTGACAGGTGCTAGGAAAATTGTTGGGCGGAGACCAGT
                      ____________________________________________________________
consensus             TAAGAAAATAAAGTTGTGTTAGGTGACAGGTGCTAGGAAAATTGTTGGGCGGAGACCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024A11+           GAATTGAATTGAAGAAGTGATCCTAACACTACTCAATATGCATGGAGATGAAGTAGTCGC
                      ____________________________________________________________
consensus             GAATTGAATTGAAGAAGTGATCCTAACACTACTCAATATGCATGGAGATGAAGTAGTCGC