Contig 010226:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014D04Sequence638010226 (3)ref|XP_006357808.1|9e-75PREDICTED: MATE efflux family protein 9-like [Solanum tuberosum]796012267 (4)ref|XP_004232021.1|1e-99PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum]
JMFF023H18Sequence485010226 (3)ref|XP_006357808.1|1e-43PREDICTED: MATE efflux family protein 9-like [Solanum tuberosum]730012267 (4)ref|XP_004232021.1|2e-84PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum]
JMSF044J10Sequence774010226 (3)ref|XP_004232021.1|4e-105PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum]752011298 (4)ref|XP_004234578.1|2e-87PREDICTED: MATE efflux family protein 9-like [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF044J10+                                            AGAAACTGAAGCTGATGCGGGTTTCAT
                      ____________________________________________________________
consensus                                              AGAAACTGAAGCTGATGCGGGTTTCAT
 
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JMSF044J10+           TGCAGGAGGAAGAATAACGCACATAAACACCAAGGAGGACGACATTGAGCCAGTACGACA
                      ____________________________________________________________
consensus             TGCAGGAGGAAGAATAACGCACATAAACACCAAGGAGGACGACATTGAGCCAGTACGACA
 
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JMSF044J10+           AAGCAATTGCTATTGCTGCTCCACTGCTGCCTAAGTTAAACTTGAACACAAATGCCCAAC
                      ____________________________________________________________
consensus             AAGCAATTGCTATTGCTGCTCCACTGCTGCCTAAGTTAAACTTGAACACAAATGCCCAAC
 
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JMSF044J10+           AGACAGGCACATGAAAGCATAGAGACGCAACTGAGCTTAAGAGCATAGGAAGGATCAAGC
JMFF014D04+                         AAGCATAGAGATGCTACTGAGCTTAAGAGCATTGGAAGGATCAAGC
                      ____________________________________________________________
consensus             AGACAGGCACATGAAAGCATAGAGATGCTACTGAGCTTAAGAGCATTGGAAGGATCAAGC
 
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JMSF044J10+           TTTGTGTTTGCAGGTAACGAACCAGTGGTTGAAGAATTGCATATGGAAACAGGGCAGGAA
JMFF014D04+           TTTGTGTTTGCAGGTAACGAACCAGTGGTTGAAGAATAGCATGTGAAAACAGGGCAGGAA
                      ____________________________________________________________
consensus             TTTGTGTTTGCAGGTAACGAACCAGTGGTTGAAGAATTGCATGTGGAAACAGGGCAGGAA
 
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JMSF044J10+           TCAGCCAAATCGAATATTTTTTGGCTTCAACTGAAATCAGCGGGTCTTGGCCTATTATCA
JMFF014D04+           TCAGCCAAATTGAATATTTTCTGGCTTCAACAGAAATCAGTGGATCTTGGCCTATTAATA
JMFF023H18+                                                                      A
                      ____________________________________________________________
consensus             TCAGCCAAATTGAATATTTTTTGGCTTCAACTGAAATCAGTGGGTCTTGGCCTATTATTA
 
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JMSF044J10+           TCAAAAGTTTATCCATGAAAACCCATAGAATAGATATTGGTATGCAGGCCACAATGAGAG
JMFF014D04+           TCAATAGTTTATCCATGAAAACCCATAGAATAGATATTGGTATGCAGACTATAACGAGAG
JMFF023H18+           TCAATAGTTTATCCATGAAAACCCATAGAATAGATATTGGTATGCAGACTATAACGAGAG
                      ____________________________________________________________
consensus             TCAATAGTTTATCCATGAAAACCCATAGAATAGATATTGGTATGCAGACTATAACGAGAG
 
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JMSF044J10+           GTATTATAGCTCCAAATGTGTAGACGCCTAGCTTCTTGTAATGCAGAGCTCCATATGCTT
JMFF014D04+           CTATCATAGCTCCATTTGTGTAGACACTTAGCTTCTTGTATTGCCTAGCTCCATATGCTT
JMFF023H18+           CTATCATAGCTCCATTTGTGTAGACACTTAGCTTCTTGTATTGCCTAGCTCCATATGCTT
                      ____________________________________________________________
consensus             CTATCATAGCTCCATTTGTGTAGACACTTAGCTTCTTGTATTGCCTAGCTCCATATGCTT
 
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JMSF044J10+           GGCCACACAGAGTCTCCAGTGCACTAGCCATTCCAAAAAGGAGACTGAAACCGGTGACGT
JMFF014D04+           GGCCACACAAAGTCTCTAGTCCACTAGACAGTCCATAGAGAAGACTGAAACCGGTGACGT
JMFF023H18+           GGCCACACAAAGTCTCTAGTCCACTAGACAGTCCATAGAGAAGACTGAAACCGGTGACGT
                      ____________________________________________________________
consensus             GGCCACACAAAGTCTCTAGTCCACTAGACAGTCCATAGAGAAGACTGAAACCGGTGACGT
 
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JMSF044J10+           TGGTGAGAGAAGTGGCGATGGCGGCGCCGGAGAGTGAGAGTTCGCCGAGGTGGCCGACCA
JMFF014D04+           TGGTGAGAGAGGTGGCGATGGCGGCGCCGGAGAGGGATAGTTCGCCGAGGTGTCCGAGCA
JMFF023H18+           TGGTGAGAGAGGTGGCGATGGCGGCGCCGGAGAGGGATAGTTCGCCGAGGTGTCCGAGCA
                      ____________________________________________________________
consensus             TGGTGAGAGAGGTGGCGATGGCGGCGCCGGAGAGGGATAGTTCGCCGAGGTGTCCGAGCA
 
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JMSF044J10+           TCATCATCCCTATCGTGGTCACGAGTTGCTGGGAAATTGTGACGACCACCATGGGCAGTG
JMFF014D04+           TCATCATGGCTACCGTGATCACCAGTTGCTGGGAAATCGCGACGAAGACCATTGGTAGTG
JMFF023H18+           TCATCATGGCTACCGTGATCACCAGTTGCTGGGAAATCGCGACGAAGACCATTGGTAGTG
                      ____________________________________________________________
consensus             TCATCATGGCTACCGTGATCACCAGTTGCTGGGAAATCGCGACGAAGACCATTGGTAGTG
 
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JMSF044J10+           CTATGCAGCTCACCTTCTTTAGCTCCTCCCAGAACGCATCCCATTTCGACCATATTCCTT
JMFF014D04+           CTATGCGGCTGACCTTCTTCAGCTCCTCCGTCAACGCATCCCATCTCGATGATATTCCGA
JMFF023H18+           CTATGCGGCTGACCTTCTTCAGCTCCTCCGTCAACGCATCCCATCTCGATGATATTCCGA
                      ____________________________________________________________
consensus             CTATGCGGCTGACCTTCTTCAGCTCCTCCGTCAACGCATCCCATCTCGATGATATTCCGA
 
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JMSF044J10+           TCTTCCTCCCCTCCTCTACTTCTCGCAGCAATGG                          
JMFF014D04+           TCTTCCTCTCTCCCTCTACTTCTCGCAGCAATGGAGATTCCGACATCTTCTCCACTCTGT
JMFF023H18+           TCTTCCTCTCTCCCTCTACTTCTCGCAGCAATGGAGATTCCGACATCTTCTCCACTCTGT
                      ____________________________________________________________
consensus             TCTTCCTCTCTCCCTCTACTTCTCGCAGCAATGGAGATTCCGACATCTTCTCCACTCTGT
 
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JMFF014D04+           TCTCCTCACCAAAAGACAGACACCATCGATATATCTCCTCTCCAGTCTCCTT        
JMFF023H18+           TCTCCTCACCAAAAGACAGACACCATCGATATATCTCCTCTCCAGTCTCCTTAAGTAAAC
                      ____________________________________________________________
consensus             TCTCCTCACCAAAAGACAGACACCATCGATATATCTCCTCTCCAGTCTCCTTAAGTAAAC