clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF023H07 | Sequence | 395 | 010225 (5) | gb|ACJ05392.1| | 5e-29 | peroxisome biogenesis factor 14 [Nicotiana tabacum] | 611 | 002697 (4) | ref|XP_009800698.1| | 1e-34 | PREDICTED: peroxisomal membrane protein PEX14-like [Nicotiana sylvestris] |
JMFF046E24 | Sequence | 551 | 010225 (5) | gb|ACJ05392.1| | 1e-39 | peroxisome biogenesis factor 14 [Nicotiana tabacum] | 512 | 002697 (4) | ref|XP_009627986.1| | 8e-13 | PREDICTED: peroxisomal membrane protein PEX14 isoform X2 [Nicotiana tomentosifo |
JMFS163E10 | Sequence | 626 | 010225 (5) | ref|XP_006347456.1| | 1e-54 | PREDICTED: peroxisomal membrane protein PEX14-like isoform X1 [Solanum tuberosu | |||||
JMSF004P24 | Sequence | 318 | 010225 (5) | gb|ACJ05392.1| | 8e-12 | peroxisome biogenesis factor 14 [Nicotiana tabacum] | 403 | 002697 (4) | ref|XP_009627986.1| | 6e-10 | PREDICTED: peroxisomal membrane protein PEX14 isoform X2 [Nicotiana tomentosifo |
JMSF032J16 | Sequence | 676 | 010225 (5) | ref|XP_006347456.1| | 1e-59 | PREDICTED: peroxisomal membrane protein PEX14-like isoform X1 [Solanum tuberosu | 791 | 002697 (4) | ref|XP_009627985.1| | 2e-52 | PREDICTED: peroxisomal membrane protein PEX14 isoform X1 [Nicotiana tomentosifo |
This contig is upended
. : . : . : . : . : . :
JMFS163E10+ CCAAGACTTAAATCGAGGAATANTAGTT
JMSF032J16+ TCCAGTACAACCTTCCGAATCCAAGACTTAAATCGAGGAATTATAGTT
____________________________________________________________
consensus TCCAGTACAACCTTCCGAATCCAAGACTTAAATCGAGGAATTATAGTT
. : . : . : . : . : . :
JMFS163E10+ TTCTTAAAAAGAATTGCAGTACCAGCTCCTGAAGCCGCCAGTACACCAACCACAACCACT
JMSF032J16+ TTCTTAAAAAGAATTGCAGTACCAGCTCCTGAAGCCGCCAGTACACCAACCACAACCACT
____________________________________________________________
consensus TTCTTAAAAAGAATTGCAGTACCAGCTCCTGAAGCCGCCAGTACACCAACCACAACCACT
. : . : . : . : . : . :
JMFS163E10+ GCATGACTCCAATGGAATTGAGAAAAGTATCCCACTTTTGTCATGGTACCAGCAGAGGCA
JMSF032J16+ GCATGACTCCAATGGAATTGAGAAAAGTATCCCACTTTTGTCATGGTACCAGCAGAGGCA
JMFF046E24+ CAGCAGAGGCA
____________________________________________________________
consensus GCATGACTCCAATGGAATTGAGAAAAGTATCCCACTTTTGTCATGGTACCAGCAGAGGCA
. : . : . : . : . : . :
JMFS163E10+ GCAGGTACTGGCTGTGGCTGAATATTTGATGAAGTTTTCAACTGTCCTTCTTGATTTGCA
JMSF032J16+ GCAGGTACTGGCTGTGGCTGAATATTTGATGAAGTTTTCAACTGTCCTTCTTGATTTGCA
JMFF046E24+ GCAGGTACTGGCTGTGGCTGAATATNTGATGAAGTTTTCAACTGTCCTTCTGNATTTGCA
____________________________________________________________
consensus GCAGGTACTGGCTGTGGCTGAATATTTGATGAAGTTTTCAACTGTCCTTCTTGATTTGCA
. : . : . : . : . : . :
JMFS163E10+ ACAGTAGTTTGTGTAGTAGAAACAGATGGGGTAGGATCAGGAACCCGGCGAAAAGCTTCA
JMSF032J16+ ACAGTAGTTTGTGTAGTAGAAACAGATGGGGTAGGATCAGGAACCCGGCGAAAAGCTTCA
JMFF046E24+ ACAGTAGTTTGTGTAGTAGAAACAGATGGGGTAGGATCAGGAACCCGGCGAAAAGCTTCA
____________________________________________________________
consensus ACAGTAGTTTGTGTAGTAGAAACAGATGGGGTAGGATCAGGAACCCGGCGAAAAGCTTCA
. : . : . : . : . : . :
JMFS163E10+ TCTATTTCCTCCTTTGTGAGGCCCTTCCTCTCAAGAAAAGAACGCCTATACATGACTGGA
JMSF032J16+ TCTATTTCCTCCTTTGTGAGGCCCTTCCTCTCAAGAAAAGAACGCCTATACATGACTGGA
JMFF046E24+ TCTATTTCCTCCTTTGTGAGGCCCTTCCTCTCAAGAAAAGAACGCCTATACATGACTGGA
JMFF023H07+ TCCTCTCAAGAAAAGAACGCCTATACATGACTGGA
____________________________________________________________
consensus TCTATTTCCTCCTTTGTGAGGCCCTTCCTCTCAAGAAAAGAACGCCTATACATGACTGGA
. : . : . : . : . : . :
JMFS163E10+ GATCCCCTAACCTTCGGGTGTGAAAGAAACTTCACAGCATTTTGCACCTGATCTTCACGC
JMSF032J16+ GATCCCCTAACCTTCGGGTGTGAAAGAAACTTCACAGCATTTTGCACCTGATCTTCACGC
JMSF004P24+ TTCACAGCATTTTGCACCTGATCTTCACGC
JMFF046E24+ GATCCCCTAACCTTCGGGTGTGAAAGAAACTTCACAGCATTTTGCACCTGATCTTCACGC
JMFF023H07+ GATCCCCTAACCTTCGGGTGTGAAAGAAACTTCACAGCATTTTGCACCTGATCTTCACGC
____________________________________________________________
consensus GATCCCCTAACCTTCGGGTGTGAAAGAAACTTCACAGCATTTTGCACCTGATCTTCACGC
. : . : . : . : . : . :
JMFS163E10+ ATTGGTTCTGAATTTACAAACACAGAAGGTGAAGATTTCTCCCTTGCATCTTCTGGCTTT
JMSF032J16+ ATTGGTTCTGAATTTACAAACACAGAAGGTGAAGATTTCTCCCTTGCATCTTCTGGCTTT
JMSF004P24+ ATTGGTTCTGAATTTACAAACACAGAAGGTGAAGATTTCTCCCTTGCATCTTCTGGCTTT
JMFF046E24+ ATTGGTTCTGAATTTACAAACACAGAAGGTGAAGATTTCTCCCTTGCATCTTCTGGCTTT
JMFF023H07+ ATTGGTTCTGAATTTACAAACACAGAAGGTGAAGATTTCTCCCTTGCATCTTCTGGCTTT
____________________________________________________________
consensus ATTGGTTCTGAATTTACAAACACAGAAGGTGAAGATTTCTCCCTTGCATCTTCTGGCTTT
. : . : . : . : . : . :
JMFS163E10+ GAAACTTGATGTTCTTCAGGAGTTTGTTGGACAGACTCTGGATTTTGCGGCTTATTGTCG
JMSF032J16+ GAAACTTGATGTTCTTCAGGAGTTTGTTGGACAGACTCTGGATTTTGCGGCTTATTGTCG
JMSF004P24+ GAAACTTGATGTTCTTCAGGAGTTTGTTGGACAGACTCTGGATTTTGCGGCTTATTGTCG
JMFF046E24+ GAAACTTGATGTTCTTCAGGAGTTTGTTGGACAGACTCTGGATTTTGCGGCTTATTGTCG
JMFF023H07+ GAAACTTGATGTTCTTCAGGAGTTTGTTGGACAGACTCTGGATTTTGCGGCTTATTGTCG
____________________________________________________________
consensus GAAACTTGATGTTCTTCAGGAGTTTGTTGGACAGACTCTGGATTTTGCGGCTTATTGTCG
. : . : . : . : . : . :
JMFS163E10+ ACTAAATTAGGAGGAGAATCGGACTGACTCGCCATGTCCACTCCTCTTCTTTAGTACAAA
JMSF032J16+ ACTAAATTAGGAGGAGAATCGGACTGACTCGCCATGTCCACTCCTCTTCTTTAGTACAAA
JMSF004P24+ ACTAAATTAGGAGGAGAATCGGACTGACTCGCCATGTCCACTCCTCTTCTTTAGTACAAA
JMFF046E24+ ACTAAATTAGGAGGAGAATCGGACTGACTCGCCATGTCCACTCCTCTTCTTTAGTACAAA
JMFF023H07+ ACTAAATTAGGAGGAGAATCGGACTGACTCGCCATGTCCACTCCTCTTCTTTAGTACAAA
____________________________________________________________
consensus ACTAAATTAGGAGGAGAATCGGACTGACTCGCCATGTCCACTCCTCTTCTTTAGTACAAA
. : . : . : . : . : . :
JMFS163E10+ ATCTAAGGCGATGACGATACAAACTAGAAAGTGTGAAGAAGGAAAGTGCGTTTCAGTC
JMSF032J16+ ATCTAAGGCGATGACGATACAAACTAGAAAGTGTGAAGAAGGAAAGTGCGTTTCAGTCTT
JMSF004P24+ ATCTAAGGCGATGACGATACAAACTAGAAAGTGTGAAGAAGGAAAGTGCGTTTCAGTCTT
JMFF046E24+ ATCTAAGGCGATGACGATACAAACTAGAAAGTGTGAAGAAGGAAAGTGCGTTTCAGTCTT
JMFF023H07+ ATCTAAGGCGATGACGATACAAACTAGAAAGTGTGAAGAAGGAAAGTGCGTTTCAGTCTT
____________________________________________________________
consensus ATCTAAGGCGATGACGATACAAACTAGAAAGTGTGAAGAAGGAAAGTGCGTTTCAGTCTT
. : . : . : . : . : . :
JMSF032J16+ TGCTCATCGCATAATAGATTAGACTCC
JMSF004P24+ TGCTCATCGCATAATAGATTAGACTCC
JMFF046E24+ TGCTCATCGCATAATAGATTAGACTCCATGTCCCCAGCCCCGAGGTCCTGACTTTTATAT
JMFF023H07+ TGCTCATCGCATAATAGATTAGACTCCATGTCCCCAGCCCCGAGGTCCTGACTTTTATAT
____________________________________________________________
consensus TGCTCATCGCATAATAGATTAGACTCCATGTCCCCAGCCCCGAGGTCCTGACTTTTATAT