| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023A15 | Sequence | 474 | 010224 (6) | gb|KCW50418.1| | 2e-88 | hypothetical protein EUGRSUZ_J00163 [Eucalyptus grandis] gb|KCW50419.1| hypothet | 457 | 010224 (6) | gb|KCW50418.1| | 5e-90 | hypothetical protein EUGRSUZ_J00163 [Eucalyptus grandis] gb|KCW50419.1| hypothet |
| JMFF041H19 | Sequence | 490 | 010224 (6) | gb|KCW50418.1| | 5e-94 | hypothetical protein EUGRSUZ_J00163 [Eucalyptus grandis] gb|KCW50419.1| hypothet | 494 | 010224 (6) | gb|KCW50418.1| | 8e-95 | hypothetical protein EUGRSUZ_J00163 [Eucalyptus grandis] gb|KCW50419.1| hypothet |
| JMFF044D08 | Sequence | 491 | 010224 (6) | gb|KCW50418.1| | 5e-94 | hypothetical protein EUGRSUZ_J00163 [Eucalyptus grandis] gb|KCW50419.1| hypothet | 494 | 010224 (6) | gb|KCW50418.1| | 8e-95 | hypothetical protein EUGRSUZ_J00163 [Eucalyptus grandis] gb|KCW50419.1| hypothet |
This contig is upended
. : . : . : . : . : . :
JMFF041H19+ CGATCGAGAACCGGT
rJMFF041H19- CGATCGAGAACCGGT
JMFF044D08+ CGATCGAGAACCGGT
rJMFF044D08- CGATCGAGAACCGGT
____________________________________________________________
consensus CGATCGAGAACCGGT
. : . : . : . : . : . :
JMFF041H19+ GATGAAGCCACACCGTAAAAAAGTCTA-CGACAGTTCCTCTGACAGTATCTGTTATAACA
rJMFF041H19- GATGAAGCCACACCGTAAAAAAGTCTA-CGACAGTTCCTCTGACAGTATCTGTTATAACA
JMFF044D08+ GATGAAGCCACACCGTAAAAAAGTCTA-CGACAGTTCCTCTGACAGTATCTGTTATAACA
rJMFF023A15- GTCTA-CGACAGTTCCTCTGACAGTATCTGTTATAACA
rJMFF044D08- GATGAAGCCACACCGTAAAAAAGTCTA-CGACAGTTCCTCTGACAGTATCTGTTATAACA
JMFF023A15+ GCCACACCGTAAAAAAGTCTACCGACAGTTCCTCTGACAGTATCTGTTATAACA
____________________________________________________________
consensus GATGAAGCCACACCGTAAAAAAGTCTA-CGACAGTTCCTCTGACAGTATCTGTTATAACA
. : . : . : . : . : . :
JMFF041H19+ TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
rJMFF041H19- TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
JMFF044D08+ TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
rJMFF023A15- TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
rJMFF044D08- TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
JMFF023A15+ TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
____________________________________________________________
consensus TAGTCAATCTCTTCCAAGAATTTTTCTTTACGCTTTTCATACTGTGCTAAGAGCGTGGTT
. : . : . : . : . : . :
JMFF041H19+ GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
rJMFF041H19- GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
JMFF044D08+ GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
rJMFF023A15- GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
rJMFF044D08- GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
JMFF023A15+ GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
____________________________________________________________
consensus GTTATCGATATAGCTTCTTCGATAGCTAATCGATTCAGAAATTTGGGATCTGCCAACAAT
. : . : . : . : . : . :
JMFF041H19+ CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
rJMFF041H19- CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
JMFF044D08+ CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
rJMFF023A15- CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
rJMFF044D08- CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
JMFF023A15+ CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
____________________________________________________________
consensus CGCTCTCTAAAACCCTGAAAACCCTTCGTTAAGTCTGAAATAACAGGGTATTGCTCTAGA
. : . : . : . : . : . :
JMFF041H19+ TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
rJMFF041H19- TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
JMFF044D08+ TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
rJMFF023A15- TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
rJMFF044D08- TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
JMFF023A15+ TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
____________________________________________________________
consensus TCGAAAAAGTTCTGCAGCACTTCCGGTGATACCAGACCGAGATCTAGTCCTTGTTGGAGG
. : . : . : . : . : . :
JMFF041H19+ TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
rJMFF041H19- TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
JMFF044D08+ TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
rJMFF023A15- TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
rJMFF044D08- TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
JMFF023A15+ TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
____________________________________________________________
consensus TCCTTGGGTAAGGCGTCTCTCCTCCTCCCCGCTGCATTCATCACCCGAGCAATTTCAGCA
. : . : . : . : . : . :
JMFF041H19+ CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
rJMFF041H19- CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
JMFF044D08+ CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
rJMFF023A15- CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
rJMFF044D08- CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
JMFF023A15+ CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
____________________________________________________________
consensus CGATCATAACAGTTCCTACTACAAGGTCGAGCTGCAGAGTACCACAGAAAATCAGCAACA
. : . : . : . : . : . :
JMFF041H19+ GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAAC
rJMFF041H19- GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAACTTGA
JMFF044D08+ GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAACT
rJMFF023A15- GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAACTTGA
rJMFF044D08- GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAACTTGA
JMFF023A15+ GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAACTTGA
____________________________________________________________
consensus GGCACTTCTCCCTCTCTCCTTATTTCTTGTCTCTCGGGATCCAGTAACACGACAACTTGA