Contig 010218:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF020C04+                                                                      C
                      ____________________________________________________________
consensus                                                                        C
 
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JMFF020C04+           AACAATACCCACTCTCAATAAACACAACCAGAACTACAAAGACCTTAGCTTGCTTAAAAC
                      ____________________________________________________________
consensus             AACAATACCCACTCTCAATAAACACAACCAGAACTACAAAGACCTTAGCTTGCTTAAAAC
 
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JMSF018B16+                                                                   CAAT
JMFF020C04+           TCTATCCAAAACTGAAAGCAAAGGAAACCCACATGCTTAAACCTCAAGAAAAGCAGCAAT
                      ____________________________________________________________
consensus             TCTATCCAAAACTGAAAGCAAAGGAAACCCACATGCTTAAACCTCAAGAAAAGCAGCAAT
 
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JMSF018B16+           CTTTCGTGGCTACTTAAAACCCAGACTATCAAAACCAAGAAACCACCCAAAAACCTCACG
JMFF020C04+           CTTTCGTGGCTACTTAAAACCCAGACTATCAAAACCAAGAAACCACCCAAAAACCTCACG
                      ____________________________________________________________
consensus             CTTTCGTGGCTACTTAAAACCCAGACTATCAAAACCAAGAAACCACCCAAAAACCTCACG
 
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JMSF018B16+           AGCGGTCACTAGAGAACCCCAAAAGAAACGTGGAAAGTGAGAGGTAGTGGTGTAATGGTT
JMFF020C04+           AGCGGTCACTAGAGAACCCCAAAAGAAACGTGGAAAGTGAGAGGTAGTGGTGTAATGGTT
                      ____________________________________________________________
consensus             AGCGGTCACTAGAGAACCCCAAAAGAAACGTGGAAAGTGAGAGGTAGTGGTGTAATGGTT
 
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JMSF018B16+           CTTGGAGTGTGATATAAAAGCTAGCTAGCTATATATACAAATAAACTGAAAATTTGCCGG
JMFF020C04+           CTTGGAGTGTGATATAAAAGCTAGCTAGCTATATATACAAATAAACTGAAAATTTGCCGG
                      ____________________________________________________________
consensus             CTTGGAGTGTGATATAAAAGCTAGCTAGCTATATATACAAATAAACTGAAAATTTGCCGG
 
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JMSF018B16+           GCTGTCTCTTTGTAGGGAGTTGCAGAGGGAGTGTTGGAGCATTGGGTGCATGGGATAGAG
JMFF020C04+           GCTGTCTCTTTGTAGGGAGTTGCAGAGGGAGTGTTGGAGCATTGGGTGCATGGGATAGAG
                      ____________________________________________________________
consensus             GCTGTCTCTTTGTAGGGAGTTGCAGAGGGAGTGTTGGAGCATTGGGTGCATGGGATAGAG
 
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JMSF018B16+           GCAGTAAATGTGGGGGGAGTAAAATATAAGGAAGCGAAAAAGAAGAAAGAGTATAGAAGC
JMFF020C04+           GCAGTAAATGTGGGGGGAGTAAAATATAAGGAAGCGAAAAAGAAGAAAGAGTATAGAAGC
                      ____________________________________________________________
consensus             GCAGTAAATGTGGGGGGAGTAAAATATAAGGAAGCGAAAAAGAAGAAAGAGTATAGAAGC
 
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JMSF018B16+           AGAGGAGATTCCCGCTCAGTCGAAGGATGTCCAAACGGAATTGCTTCAAATCGCACGCAA
JMFF020C04+           AGAGGAGATTCCCGCTCAGTCGAAGGATGTCCAAACGGAATTGCTTCAAATCGCACGCAA
                      ____________________________________________________________
consensus             AGAGGAGATTCCCGCTCAGTCGAAGGATGTCCAAACGGAATTGCTTCAAATCGCACGCAA
 
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JMSF018B16+           CCCAC                                                       
JMFF020C04+           CCCACACCTCTCTGTCTGTGTCTCTCTCTTTCTAAAGAAAAAAAGCAATGCTCTTTTTCT
                      ____________________________________________________________
consensus             CCCACACCTCTCTGTCTGTGTCTCTCTCTTTCTAAAGAAAAAAAGCAATGCTCTTTTTCT