| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018J22 | Sequence | 500 | 010211 (5) | ref|XP_009778931.1| | 6e-36 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Nicotiana sylvestris] | 629 | 005532 (4) | ref|XP_009778931.1| | 3e-23 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Nicotiana sylvestris] |
| JMFF046E23 | Sequence | 608 | 010211 (5) | ref|XP_011081365.1| | 2e-47 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 [Sesamum indicum] | 536 | 005532 (4) | |||
| JMFS016A02 | Sequence | 570 | 010211 (5) | ref|XP_010325313.1| | 3e-49 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X2 [Solanum lycopers | |||||
| JMFS070H01 | Sequence | 605 | 010211 (5) | ref|XP_010325313.1| | 1e-55 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X2 [Solanum lycopers | |||||
| JMFS142D03 | Sequence | 625 | 010211 (5) | ref|XP_009622829.1| | 5e-66 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS070H01+ TAAGACCTTTTCACTTTTGTCTTTGGAATCAA
JMFS142D03+ TTGGAATCAA
____________________________________________________________
consensus TAAGACCTTTTCACTTTTGTCTTTGGAATCAA
. : . : . : . : . : . :
JMFS070H01+ TTATATTGAGACATAGTGGGAAGACCTCCACACTTAACTGCTTATTATCACCAACAGAAA
JMFS142D03+ TTATATTGAGACATAGTGGGAAGACCTCCACACTTAACTGCTTATTATCACCAACAGAAA
____________________________________________________________
consensus TTATATTGAGACATAGTGGGAAGACCTCCACACTTAACTGCTTATTATCACCAACAGAAA
. : . : . : . : . : . :
JMFS070H01+ TGACCTTTCTGGGTAAAGCTGGTCCT--------CCACTCAAAAAGCTTCTCCCATGCTT
JMFS142D03+ TGACCTTTCTGGGTAAAGCTGGTCCTCCTTTGTACCACTCAAAAAGCTTCTCCCATGCTT
JMFS016A02+ CCACTCAAAAAGCTTCTCCCATGCTT
JMFF046E23+ CCACTCAAAAAGCTTCTCCCATGCTT
____________________________________________________________
consensus TGACCTTTCTGGGTAAAGCTGGTCCTCCTTTGTACCACTCAAAAAGCTTCTCCCATGCTT
. : . : . : . : . : . :
JMFS070H01+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
JMFS142D03+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCGCAAGCTGTGCATCAT
JMFS016A02+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
JMFF046E23+ CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
JMFF018J22+ TCTCACAAGCTGTGCATCAT
____________________________________________________________
consensus CTTTTGGAACTAACTCATAATCAAGCCCCTCTTGCAAGGTTCTCACAAGCTGTGCATCAT
. : . : . : . : . : . :
JMFS070H01+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFS142D03+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFS016A02+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFF046E23+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
JMFF018J22+ CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
____________________________________________________________
consensus CACAATCACTATCACTTCCTCTTGCAATAATACCACTATTGTCGATTGGACCAGGTCTCT
. : . : . : . : . : . :
JMFS070H01+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFS142D03+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFS016A02+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFF046E23+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
JMFF018J22+ CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
____________________________________________________________
consensus CAGCTGTATTTGGCCCTTCCAAAGGCTGATCAAATGTATACGCACCAACAGGCTGCCCGG
. : . : . : . : . : . :
JMFS070H01+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFS142D03+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFS016A02+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFF046E23+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
JMFF018J22+ TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
____________________________________________________________
consensus TATATCTTTGCCAAGCCGTGTACCACCTGGTAGAAATAACATAAACCAAGTCGCCCTCTT
. : . : . : . : . : . :
JMFS070H01+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFS142D03+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFS016A02+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFF046E23+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
JMFF018J22+ TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
____________________________________________________________
consensus TCAGGTTAAACTCGGCCTTGTTCGTGAGCTCCTGTATAATCCTCCTTTCTTCTTCCGGCG
. : . : . : . : . : . :
JMFS070H01+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFS142D03+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFS016A02+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFF046E23+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
JMFF018J22+ TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
____________________________________________________________
consensus TGCAGGGAAATTCAATCGATCCGTTCTCCATCATCGTACACATCGAATCTGGAATCGTCA
. : . : . : . : . : . :
JMFS070H01+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFS142D03+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFS016A02+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFF046E23+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
JMFF018J22+ TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
____________________________________________________________
consensus TGATCGGTTCAAATTCATAGATCAGCAAAACCAGAGATACACGAAAGGAATGTACGTATG
. : . : . : . : . : . :
JMFS070H01+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGA
JMFS142D03+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
JMFS016A02+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
JMFF046E23+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
JMFF018J22+ CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
____________________________________________________________
consensus CGTCAATGTAGTGTCGGAAGCGTATGGCTTAGGGTTTCGGACCCTAGATTACAGGAAGAA
. : . : . : . : . : . :
JMFS142D03+ AGAATTTCAATCTGA
JMFS016A02+ AGAATTTCAATCTGAGTCGATTTTGATCTACGGGAGAAATTATCAGA
JMFF046E23+ AGAATTTCAATCTGAGTCGATTTTGATCTACGGGAGAAATTATCAGACAACTCTTTCAA
JMFF018J22+ AGAATTTCAATCTGAGTCGATTTTGATNTACGGGAGAAATTATCAGACAACTCTTTCAAC
____________________________________________________________
consensus AGAATTTCAATCTGAGTCGATTTTGATCTACGGGAGAAATTATCAGACAACTCTTTCAAC