Contig 010209:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018H08Sequence554010209 (3)ref|XP_006361551.1|211PREDICTED: uncharacterized protein LOC102578599 [Solanum tuberosum]234015919ref|XP_006599039.1|2e-11PREDICTED: uncharacterized protein LOC100775183 isoform X1 [Glycine max] ref|XP
JMFS011G02Sequence642010209 (3)ref|XP_006361551.1|218PREDICTED: uncharacterized protein LOC102578599 [Solanum tuberosum]
JMFS020D09Sequence641010209 (3)ref|XP_006361551.1|218PREDICTED: uncharacterized protein LOC102578599 [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+             GATCATCATTTCCTCCATTCACTGAATCTGCAATAGATTGCTCATCCTTCTCAGTGGA
JMFS011G02+            TGATCATCATTTCCTCCATTCACTGAATCTGCAATAGATTGCTCATCCTTCTCAGTGGA
                      ____________________________________________________________
consensus              TGATCATCATTTCCTCCATTCACTGAATCTGCAATAGATTGCTCATCCTTCTCAGTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           CGTTCTTTTTGATAAGCTGACCTTAGAAGATGAACTTGAGCTATCCTTGTGAACAGGCTG
JMFS011G02+           CGTTCTTTTTGATAAGCTGACCTTAGAAGATGAACTTGAGCTATCCTTGTGAACAGGCTG
JMFF018H08+                                                         TTGTGAACAGGCTG
                      ____________________________________________________________
consensus             CGTTCTTTTTGATAAGCTGACCTTAGAAGATGAACTTGAGCTATCCTTGTGAACAGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           TACTGTAACGAACATGCTGGGTTGCTCAAAGCTTTTTGAACTCTTTTTGCTGTTCACAGG
JMFS011G02+           TACTGTAACGAACATGCTGGGTTGCTCAAAGCTTTTTGAACTCTTTTTGCTGTTCACAGG
JMFF018H08+           TACTGTAACGAACATGCTGGGTTGCTCAAAGCTTTTTGAACTCCTTTTGCTGTTCACAGG
                      ____________________________________________________________
consensus             TACTGTAACGAACATGCTGGGTTGCTCAAAGCTTTTTGAACTCTTTTTGCTGTTCACAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           AGTGCAAATGCTCATATCCTCCTCAATAGCCCCAAAATCTGCAAGATTTAGTGTGGCTGT
JMFS011G02+           AGTGCAAATGCTCATATCCTCCTCAATAGCCCCAAAATCTGCAAGATTTAGTGTGGCTGT
JMFF018H08+           AGTGCAAATGCTCATATCCTCCTCAATAGCCCCAAAATCTGCAAGATTTAGTGTGGCTGT
                      ____________________________________________________________
consensus             AGTGCAAATGCTCATATCCTCCTCAATAGCCCCAAAATCTGCAAGATTTAGTGTGGCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           CCCCAACAGTTGCCCTCTACTCGCCTTGTCCTTCCGAGGTTCGTATAGGTAAAGATTCAA
JMFS011G02+           CCCCAACAGTTGCCCTCTACTCGCCTTGTCCTTCCGAGGTTCGTATAGGTAAAGATTCAA
JMFF018H08+           CCCCAACAGTTGCCCTCTACTCGCCTTGTCCTTCCGAGGTTCGTATAGGTAAAGATTCAA
                      ____________________________________________________________
consensus             CCCCAACAGTTGCCCTCTACTCGCCTTGTCCTTCCGAGGTTCGTATAGGTAAAGATTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           CAAATTCTTCTGGAACTTATCACGAGCCCTCTTTTCATGACATAGAGTTACTGAGAGAGC
JMFS011G02+           CAAATTCTTCTGGAACTTATCACGAGCCCTCTTTTCATGACATAGAGTTACTGAGAGAGC
JMFF018H08+           CAAATTCTTCTGGAACTTATCACGAGCCCTCTTTTCATGACATAGAGTTACTGAGAGAGC
                      ____________________________________________________________
consensus             CAAATTCTTCTGGAACTTATCACGAGCCCTCTTTTCATGACATAGAGTTACTGAGAGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           AAAGGACTCATTGAATTCAATACTCGCATCCCCTACATTAGATATGAAAGACCCAGAGTT
JMFS011G02+           AAAGGACTCATTGAATTCAATACTCGCATCCCCTACATTAGATATGAAAGACCCAGAGTT
JMFF018H08+           AAAGGACTCATTGAATTCAATACTCGCATCCCCTACATTAGATATGAAAGACCCAGAGTT
                      ____________________________________________________________
consensus             AAAGGACTCATTGAATTCAATACTCGCATCCCCTACATTAGATATGAAAGACCCAGAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           CTGATCACCATTCTGCCAGACGAGCAACACAGACCGAACAGATCTAAGCGACTGCGATGG
JMFS011G02+           CTGATCACCATTCTGCCAGACGAGCAACACAGACCGAACAGATCTAAGCGACTGCGATGG
JMFF018H08+           CTGATCACCATTCTGCCAGACGAGCAACACAGACCGAACAGATCTAAGCGACTGCGATGG
                      ____________________________________________________________
consensus             CTGATCACCATTCTGCCAGACGAGCAACACAGACCGAACAGATCTAAGCGACTGCGATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           CGGCCAAGGCTTAACCTCCTCCACATGGATAACAAAATCTACTTGAACAGAAGCACCCTT
JMFS011G02+           CGGCCAAGGCTTAACCTCCTCCACATGGATAACAAAATCTACTTGAACAGAAGCACCCTT
JMFF018H08+           CGGCCAAGGCTTAACCTCCTCCACATGGATAACAAAATCTACTTGAACAGAAGCACCCTT
                      ____________________________________________________________
consensus             CGGCCAAGGCTTAACCTCCTCCACATGGATAACAAAATCTACTTGAACAGAAGCACCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           CTTGTGCCTCGATCTCAGCCCGAGAACCATAGCTTAAAATCCACTTCAAATGCTGTAGGA
JMFS011G02+           CTTGTGCCTCGATCTCAGCCCGAGAACCATAGCTTAAAATCCACTTCAAATGCTGTAGGA
JMFF018H08+           CTTGTGCCTCGATCTCAGCCCGAGAACCATAGCTTAAAATCCACTTCAAATGCTGTAGGA
                      ____________________________________________________________
consensus             CTTGTGCCTCGATCTCAGCCCGAGAACCATAGCTTAAAATCCACTTCAAATGCTGTAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS020D09+           AAAACACTACTCCTTAGTAAGGAACCTAAAGACGAGAAAGAAA                 
JMFS011G02+           AAAACACTACTCCTTAGTAAGGAACCTAAAGACGAGAAAGAAA                 
JMFF018H08+           AAAACACTACTCCTTAGTAAGGAACCTAAAGACGAGAAAGAAAAACCTACTCCCAAGTTC
                      ____________________________________________________________
consensus             AAAACACTACTCCTTAGTAAGGAACCTAAAGACGAGAAAGAAAAACCTACTCCCAAGTTC