Contig 010206:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+                   AACGAAGAATAAGAAGCTAATAAGCAAAAGATGAGTGAGCCGCCCAAGTAC
JMFF018C23-                    AACGAAGAATAAGAAGCTAATAAGCAAAAGATGAGTGAGCCGCCCAAGTAC
                      ____________________________________________________________
consensus                      AACGAAGAATAAGAAGCTAATAAGCAAAAGATGAGTGAGCCGCCCAAGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          GCTTATCCCTACCCTGCTCAAGGTTACTATCAAGGCCCTCCGGTGATGCCGCCGCCGCAG
JMFF018C23-           GCTTATCCCTACCCTGCTCAAGGTTACTATCAAGGCCCTCCGGTGATGCCGCCGCCGCAG
                      ____________________________________________________________
consensus             GCTTATCCCTACCCTGCTCAAGGTTACTATCAAGGCCCTCCGGTGATGCCGCCGCCGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          TACTACGCCGCTCCGCCACCCCCCAGGAGAGAAACTGGTTTTCTCGAAGGATGTTTGGCA
JMFF018C23-           TACTACGCCGCTCCGCCACCCCCCAGGAGAGAAACTGGTTTTCTCGAAGGATGTTTGGCA
                      ____________________________________________________________
consensus             TACTACGCCGCTCCGCCACCCCCCAGGAGAGAAACTGGTTTTCTCGAAGGATGTTTGGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          GCTCTGTGTTGCTGCTGGCTGTTAGATGAGTGCTGCTGCGACCCCTCCATCGTCTTCATC
JMFF018C23-           GCTCTGTGTTGCTGCTGGCTGTTAGATGAGTGCTGCTGCGACCCCTCCATCGTCTTCATC
                      ____________________________________________________________
consensus             GCTCTGTGTTGCTGCTGGCTGTTAGATGAGTGCTGCTGCGACCCCTCCATCGTCTTCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          AGCTGATTATATATATATGCATGGAGATTGTTATTACAATTAGTGGGTTATATATGTTGT
JMFF018C23-           AGCTGATTATATATATATGCATGGAGATTGTTATTACAATTAGTGGGTTATATATGTTGT
                      ____________________________________________________________
consensus             AGCTGATTATATATATATGCATGGAGATTGTTATTACAATTAGTGGGTTATATATGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          AGTAAGTTATTATCTGATCTGTTTAAATAAATCTGCAGTGATTTGATGATGTTTTTAGTT
JMFF018C23-           AGTAAGTTATTATCTGATCTGTTTAAATAAATCTGCAGTGATTTGATGATGTTTTTAGTT
                      ____________________________________________________________
consensus             AGTAAGTTATTATCTGATCTGTTTAAATAAATCTGCAGTGATTTGATGATGTTTTTAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          GTTAATCAAGAGAGCTTAATTAGTTTGATCTTGAATGTGAAATGTGATACCTTAGGCTCA
JMFF018C23-           GTTAATCAAGAGAGCTTAATTAGTTTGATCTTGAATGTGAAATGTGATACCTTAGGCTCA
                      ____________________________________________________________
consensus             GTTAATCAAGAGAGCTTAATTAGTTTGATCTTGAATGTGAAATGTGATACCTTAGGCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF018C23+          GGCTTTCATGTCCAAATTACACTGTCACTAAAAT                          
JMFF018C23-           GGCTTTCATGTCCAAATTACACTGTCACTAAAATTGACGCATTTCTGGCCAAAAAAAAAA
                      ____________________________________________________________
consensus             GGCTTTCATGTCCAAATTACACTGTCACTAAAATTGACGCATTTCTGGCCAAAAAAAAAA