Contig 010205:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H15Sequence546010205 (10)ref|XP_004291357.1|1e-91PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]675001631 (25)gb|AFY06650.1|1e-110beta-tubulin, partial [Carica papaya]
JMFF018A24Sequence502010205 (10)ref|XP_004291357.1|1e-85PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]702001631 (25)gb|AFY06650.1|3e-129beta-tubulin, partial [Carica papaya]
JMFF035C03Sequence496010205 (10)ref|XP_004291357.1|1e-83PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]621001631 (25)gb|AFY06650.1|9e-108beta-tubulin, partial [Carica papaya]
JMFF048E08Sequence354010205 (10)gb|ABP65322.1|8e-55beta tubulin [Capsicum annuum]369001631 (25)gb|AFK39312.1|2e-33unknown [Medicago truncatula]
JMFF049L06Sequence624010205 (10)ref|XP_004291357.1|8e-128PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]614001631 (25)gb|AFK39312.1|7e-35unknown [Medicago truncatula]
JMFS134G07Sequence615010205 (10)ref|XP_004291357.1|6e-116PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]
JMSF010H13Sequence409010205 (10)ref|XP_004291357.1|2e-68PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]689001631 (25)gb|AFY06650.1|2e-119beta-tubulin, partial [Carica papaya]
JMSF021J15Sequence665010205 (10)ref|XP_004291357.1|1e-95PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]776001631 (25)gb|AFY06650.1|2e-134beta-tubulin, partial [Carica papaya]
JMSF044D01Sequence503010205 (10)gb|ACY01827.1|7e-104beta tubulin [Hordeum vulgare subsp. vulgare]721001631 (25)gb|AFY06650.1|4e-129beta-tubulin, partial [Carica papaya]
JMSF049B20Sequence666010205 (10)ref|XP_004291357.1|1e-122PREDICTED: tubulin beta chain-like [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF044D01+ TCAAGCAGCACGTAACTCCACTCATAGTTGCAGAGATCAAATGGTTGAGGTC
                      ____________________________________________________________
consensus TCAAGCAGCACGTAACTCCACTCATAGTTGCAGAGATCAAATGGTTGAGGTC
 
. : . : . : . : . : . :
JMSF044D01+ GCCAAGGCTTGGAGTGCTGAGTTTCAAGGTCCTGAAACAAATATCATACAGTGCTTCGTT
                      ____________________________________________________________
consensus GCCAAGGCTTGGAGTGCTGAGTTTCAAGGTCCTGAAACAAATATCATACAGTGCTTCGTT
 
. : . : . : . : . : . :
JMSF044D01+ GTCAAGGACCATGCATTCATCTGCATTCTCCACTAATTGATGAACAGAGAGTGTGGCATT
JMFF049L06+ CATGCATTCATCTGCATTCTCCACTAATTGATGAACAGAGAGTGTGGCATT
JMSF021J15+ CCACTAATTGATGAACAGAGAGTGTGGCATT
JMFS134G07+ GCATT
JMSF049B20+ CCACTAATTGATGAACAGAGAGTGTGGCATT
                      ____________________________________________________________
consensus GTCAAGGACCATGCATTCATCTGCATTCTCCACTAATTGATGAACAGAGAGTGTGGCATT
 
. : . : . : . : . : . :
JMSF044D01+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
JMFF049L06+ ATATGGCTCTACAACTGTGTCCGAGACCTTGNGCGATGGGAAAACAGAGAATGTGAGCAT
JMSF021J15+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
JMFS134G07+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
JMSF049B20+ ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
                      ____________________________________________________________
consensus ATATGGCTCTACAACTGTGTCCGAGACCTTTGGCGATGGGAAAACAGAGAATGTGAGCAT
 
. : . : . : . : . : . :
JMSF044D01+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMFF049L06+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMSF021J15+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMFS134G07+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMFF007H15+ TTTGAAATCAAGAGAGTTCCCATGCCAGAACC
JMSF049B20+ CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
                      ____________________________________________________________
consensus CATTCTATCAGGATACTCCTCCCTTATCTTTGAAATCAAGAGAGTTCCCATGCCAGAACC
 
. : . : . : . : . : . :
JMSF044D01+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFF049L06+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMSF021J15+ AGTACCG-CTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFS134G07+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFF007H15+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMSF049B20+ AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
JMFF035C03+ AGTCACAATTCTCAGC
JMFF018A24+ GCAAACAGTCACAATTCTCAGC
                      ____________________________________________________________
consensus AGTACCGCCTCCAAGTGAGTGACAAACCTGAAATCCTTGCAAACAGTCACAATTCTCAGC
 
. : . : . : . : . : . :
JMSF044D01+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF049L06+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMSF021J15+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFS134G07+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF007H15+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMSF010H13+ TCGGTGTAATGACC
JMSF049B20+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF035C03+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
JMFF018A24+ TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
                      ____________________________________________________________
consensus TTCCTTCCGAACAACATCGAGAACGGCGTCGATCAACTCAGCGCCTTCGGTGTAATGACC
 
. : . : . : . : . : . :
JMSF044D01+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF049L06+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMSF021J15+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFS134G07+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF007H15+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMSF010H13+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF048E08+ AAGTTATCGGGCCTGAAGAT
JMSF049B20+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF035C03+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
JMFF018A24+ TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
                      ____________________________________________________________
consensus TTTGGCCCAGTTATTTCCGGCACCAGACTGTCCAAACACGAAGTTATCGGGCCTGAAGAT
 
. : . : . : . : . : . :
JMSF044D01+ CTGTCCAAACGGCCCCGATCTGATACTG
JMFF049L06+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMSF021J15+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFS134G07+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF007H15+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMSF010H13+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF048E08+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMSF049B20+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF035C03+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
JMFF018A24+ CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
                      ____________________________________________________________
consensus CTGTCCAAACGGCCCCGATCTGATACTGTCCATGGTACCTGGCTCGAGATCCATAAGGAC
 
. : . : . : . : . : . :
JMFF049L06+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMSF021J15+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFS134G07+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF007H15+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMSF010H13+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF048E08+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMSF049B20+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF035C03+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
JMFF018A24+ GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
                      ____________________________________________________________
consensus GGCGCGAGGGACGTAACGGCCGCCAGAAGCCTCGTTGAAATAAACATTGATGCGCTCGAG
 
. : . : . : . : . : . :
JMFF049L06+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMSF021J15+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFS134G07+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF007H15+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMSF010H13+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF048E08+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMSF049B20+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF035C03+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
JMFF018A24+ GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
                      ____________________________________________________________
consensus GTGGAGATCGGCGGAGCCGCTTCCTTCGTCGCCCTTGTAACGGCCGGTAGGATCAATGCC
 
. : . : . : . : . : . :
JMFF049L06+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMSF021J15+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFS134G07+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF007H15+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMSF010H13+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF048E08+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMSF049B20+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF035C03+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
JMFF018A24+ ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
                      ____________________________________________________________
consensus ATGCTCATCACAGATAACCTCCCAGAATTTGGAGCCAATTTGGTTGCCGCACTGGCCTCC
 
. : . : . : . : . : . :
JMFF049L06+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCC
JMSF021J15+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFS134G07+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF007H15+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMSF010H13+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF048E08+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMSF049B20+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF035C03+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
JMFF018A24+ CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
                      ____________________________________________________________
consensus CTGAATATGTAAGATCTCTCTCATTTTTCCCCCTGATACCTAGCTAGGTTTTGTTTAATG
 
. : . : . : . : . : . :
JMSF021J15+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTC
JMFS134G07+ GTGAGGGAAA
JMFF007H15+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMSF010H13+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMFF048E08+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMSF049B20+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCT
JMFF035C03+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCTGTTTGAGAATGGAGAGAGGATGAGAT
JMFF018A24+ GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCTGTTTGAGAATGGAGAGAGGATGAGAT
                      ____________________________________________________________
consensus GTGAGGGAAAGTGAGAGAGAGATAGGGATATTCTGTTTGAGAATGGAGAGAGGATGAGAT