| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017H22 | Sequence | 609 | 010201 (4) | ref|XP_009798896.1| | 6e-61 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X2 [Nicotiana s | 425 | 004215 (5) | ref|XP_011099522.1| | 1e-39 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X3 [Sesamum ind |
| JMFF040G14 | Sequence | 544 | 010201 (4) | ref|XP_009798896.1| | 8e-72 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X2 [Nicotiana s | 701 | 004215 (5) | ref|XP_002302688.2| | 265 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
| JMSF012C12 | Sequence | 492 | 010201 (4) | ref|XP_003637468.1| | 1e-35 | hypothetical protein MTR_087s0005, partial [Medicago truncatula] | 787 | 004215 (5) | ref|XP_002302688.2| | 266 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
| JMSF017C05 | Sequence | 418 | 010201 (4) | ref|XP_009798896.1| | 5e-40 | PREDICTED: probable inactive purple acid phosphatase 29 isoform X2 [Nicotiana s | 752 | 004215 (5) | ref|XP_002302688.2| | 322 | calcineurin-like phosphoesterase family protein [Populus trichocarpa] gb|EEE8196 |
This contig is upended
. : . : . : . : . : . :
JMFF040G14+ AGAA
____________________________________________________________
consensus AGAA
. : . : . : . : . : . :
JMFF040G14+ CCATTAACCCCAAGCACCTCCAGATTATAATTTCCAAACCCATCAATATCCTCCGCGGGA
JMFF017H22+ TCCGCGGGA
____________________________________________________________
consensus CCATTAACCCCAAGCACCTCCAGATTATAATTTCCAAACCCATCAATATCCTCCGCGGGA
. : . : . : . : . : . :
JMFF040G14+ TTCAACTGGGATAAAGTATTCTTCATCCCAACAATATGTTTCATCACGCCTTTCCTCGAT
JMFF017H22+ TTCAACTGGGATAAAGCATTCTTCATCCCAACAATATGTTTCATCACGCCTTTCCTCGAT
____________________________________________________________
consensus TTCAACTGGGATAAAGTATTCTTCATCCCAACAATATGTTTCATCACGCCTTTCCTCGAT
. : . : . : . : . : . :
JMFF040G14+ AGAGTAGATTGCTGGTCATGGTTGCCCAATACAGCAGCCCAGGGAATGTTTGAAGATACA
JMSF012C12+ GTTTGAAGATACA
JMSF017C05+ CCCAATACAGCAGCCCAGGGAATGTTTGAAGATACA
JMFF017H22+ AGAGTAGATTGCTGGTCATGGTTGCCCAATACAGCAGCCCAGGGAATGTTTGAAGATACA
____________________________________________________________
consensus AGAGTAGATTGCTGGTCATGGTTGCCCAATACAGCAGCCCAGGGAATGTTTGAAGATACA
. : . : . : . : . : . :
JMFF040G14+ GCAGGGGCAAATGCAGCATTCATAGATGCTGCAGCATCAGTAGCATCAAATCCGAAAATG
JMSF012C12+ GCAGGGGCAAATGCAGCATTCATAGATGCTGCAGCATCAGTAGCATCAAATCCGAAAATG
JMSF017C05+ GCAGGGGCAAATGCAGCATTCATAGATGCTGCAGCATCAGTAGCATCAAATCCGAAAATG
JMFF017H22+ GCAGGGGCAAATGCAGCATTCATAGATGCTGCAGCATCAGTAGCATCAAATCCGAAAATG
____________________________________________________________
consensus GCAGGGGCAAATGCAGCATTCATAGATGCTGCAGCATCAGTAGCATCAAATCCGAAAATG
. : . : . : . : . : . :
JMFF040G14+ TTGTCCCCGGTGAAAACGATGAGGTGAGGGTTCTCGGCGAGAATCATGCGGTGGATGAAG
JMSF012C12+ TTGTCCCCGGTGAAAACGATGAGGTGAGGGTTCTCGGCGAGAATCATGCGGTGGATGAAG
JMSF017C05+ TTGTCCCCGGTGAAAACGATGAGGTGAGGGTTCTCGGCGAGAATCATGCGGTGGATGAAG
JMFF017H22+ TTGTCCCCGGTGAAAACGATGAGGTGAGGGTTCTCGGCGAGAATCATGCGGTGGATGAAG
____________________________________________________________
consensus TTGTCCCCGGTGAAAACGATGAGGTGAGGGTTCTCGGCGAGAATCATGCGGTGGATGAAG
. : . : . : . : . : . :
JMFF040G14+ GCGGTGGTGTTGAGATCGGAGCAGGACGCCTCCTGCTGCGGCAGCACGTCCAGGCAATGG
JMSF012C12+ GCGGTGGTGTTGAGATCGGAGCAGGACGCCTCCTGCTGCGGCAGCACGTCCAGGCAATGG
JMSF017C05+ GCGGTGGTGTTGAGATCGGAGCAGGACGCCTCCTGCTGCGGCAGCACGTCCAGGCAATGG
JMFF017H22+ GCGGTGGTGTTGAGATCGGAGCAGGACGCCTCCTGCTGCGGCAGCACGTCCAGGCAATGG
____________________________________________________________
consensus GCGGTGGTGTTGAGATCGGAGCAGGACGCCTCCTGCTGCGGCAGCACGTCCAGGCAATGG
. : . : . : . : . : . :
JMFF040G14+ GTGGCTTTGCCGTCGGCATAGTGCATGTCCGCCACCTGAAGTATCCGGAACTGCCCATTC
JMSF012C12+ GTGGCTTTGCCGTCGGCATAGTGCATGTCCGCCACCTGAAGTATCCGGAACTGCCCATTC
JMSF017C05+ GTGGCTTTGCCGTCGGCATAGTGCATGTCCGCCACCTGAAGTATCCGGAACTGCCCATTC
JMFF017H22+ GTGGCTTTGCCGTCGGCATAGTGCATGTCCGCCACCTGAAGTATCCGGAACTGCCCATTC
____________________________________________________________
consensus GTGGCTTTGCCGTCGGCATAGTGCATGTCCGCCACCTGAAGTATCCGGAACTGCCCATTC
. : . : . : . : . : . :
JMFF040G14+ TTGGCATCAAACCTTAGCCGCCGTTGCTCGCCCACCGCGACGGAGCAATGGAATGCAATC
JMSF012C12+ TTGGCATCAAACCTTAGCCGCCGTTGCTCGCCCACCGCGACGGAGCAATGGAATGCAATC
JMSF017C05+ TTGGCATCAAACCTTAGCCGCCGTTGCTCGCCCACCGCGACGGAGCAATGGAATGCAATC
JMFF017H22+ TTGGCATCAAACCTTAGCCGCCGTTGCTCGCCCACCGCGACGGAGCAATGGAATGCAATC
____________________________________________________________
consensus TTGGCATCAAACCTTAGCCGCCGTTGCTCGCCCACCGCGACGGAGCAATGGAATGCAATC
. : . : . : . : . : . :
JMFF040G14+ ACCACCGCCGCCACTACCAGCTTCCATCTTCCAATCCCCATTTCTAATTGGCCCCACCCT
JMSF012C12+ ACCACCGCCGCCACTACCAGCTTCCATCTTCCAATCCCCATTTCTAATTGGCCCCACCCT
JMSF017C05+ ACCACCGCCGCCACTACCAGCTTCCATCTTCCAATCCCCATTTCTAATTGGCCCCACCCT
JMFF017H22+ ACCACCGCCGCCACTACCAGCTTCCATCTTCCAATCCCCATTTCTAATTGGCCCCACCCT
____________________________________________________________
consensus ACCACCGCCGCCACTACCAGCTTCCATCTTCCAATCCCCATTTCTAATTGGCCCCACCCT
. : . : . : . : . : . :
JMSF012C12+ AAAGCCTCAAAACACTAACCAATCCCAGAAATGAAACCAATGCAATGATTAAAGACTTAT
JMSF017C05+ AAAGCCTCAAAACACTAACC
JMFF017H22+ AAAGCCTCAAAACACTAACCAATCCCAGAAATGAAACCAATGCAATGATTAAAGACTTAT
____________________________________________________________
consensus AAAGCCTCAAAACACTAACCAATCCCAGAAATGAAACCAATGCAATGATTAAAGACTTAT
. : . : . : . : . : . :
JMSF012C12+ CAGTTCTCAGCTCGCCTTAGACGACTGTGGGAGTGTGATTGAGACAAGATAATATCAT
JMFF017H22+ CAGTTCTCAGCTCGCCTTAGACGACTGTGGGAGTGTGATTGAGACAAGATAATATCATAT
____________________________________________________________
consensus CAGTTCTCAGCTCGCCTTAGACGACTGTGGGAGTGTGATTGAGACAAGATAATATCATAT