| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012K18 | Sequence | 602 | 010182 (5) | ref|NP_001234609.1| | 2e-46 | prephenate aminotransferase [Solanum lycopersicum] gb|ADQ00383.1| prephenate ami | 751 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 2e-90 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
| JMFF012L01 | Sequence | 465 | 010182 (5) | ref|XP_011090466.1| | 9e-11 | PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-preph | 711 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 4e-79 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
| JMFF029H07 | Sequence | 373 | 010182 (5) | 770 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 1e-94 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr | |||
| JMFF035I14 | Sequence | 601 | 010182 (5) | ref|NP_001234609.1| | 2e-41 | prephenate aminotransferase [Solanum lycopersicum] gb|ADQ00383.1| prephenate ami | 706 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 2e-78 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
| JMSF043K16 | Sequence | 760 | 010182 (5) | ref|XP_009619635.1| | 1e-82 | PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-preph | 734 | 007507 (6) | sp|E9L7A5.1|PAT_PETHY | 1e-90 | RecName: Full=Bifunctional aspartate aminotransferase and glutamate/aspartate-pr |
This contig is upended
. : . : . : . : . : . :
JMSF043K16+ CTGCCAACCTTGCCATTTTCCGGGTAGCTAACCCAGAAGGGAGCCGGAATCAGAACC
____________________________________________________________
consensus CTGCCAACCTTGCCATTTTCCGGGTAGCTAACCCAGAAGGGAGCCGGAATCAGAACC
. : . : . : . : . : . :
JMSF043K16+ TCATCTCCGGGAGAACAAACAGCGAGGACTGCCTGAAGAATGCTTTGCTTTGCCCCATTA
____________________________________________________________
consensus TCATCTCCGGGAGAACAAACAGCGAGGACTGCCTGAAGAATGCTTTGCTTTGCCCCATTA
. : . : . : . : . : . :
JMSF043K16+ CTCACCAAAATTTGATCGGGGGTATAAGTTAGCCCATTCTCCTCTTTCAACTTATGACAA
JMFF012K18+ CTTTCAACTTATGACAA
JMFF035I14+ A
____________________________________________________________
consensus CTCACCAAAATTTGATCGGGGGTATAAGTTAGCCCATTCTCCTCTTTCAACTTATGACAA
. : . : . : . : . : . :
JMSF043K16+ ATAGCTTGACGAATTTCCATAGTGCCTGCATTTGGGGTATACCTAGTATGCCCTTCACGA
JMFF012K18+ ATAGCTTGACGAATTTCCATAGTGCCTGCATTTGGGGTATACCTAGTATGCCCTTCACGA
JMFF035I14+ ATAGCTTGACGAATTTCCATAGTGCCTGCATTTGGGGTATACCTAGTATGCCCTTCACGA
____________________________________________________________
consensus ATAGCTTGACGAATTTCCATAGTGCCTGCATTTGGGGTATACCTAGTATGCCCTTCACGA
. : . : . : . : . : . :
JMSF043K16+ ATTGCATTGATACCAGCCTCTGCTATCGGAGCAGGAGTATCGAAATCGGGTTCTCCAGCC
JMFF012K18+ ATTGCATTGATACCAGCCTCTGCTATCGGAGCAGGAGTATCGAAATCGGGTTCTCCAGCC
JMFF035I14+ ATTGCATTGATACCAGCCTCTGCTATCGGAGCAGGAGTATCGAAATCGGGTTCTCCAGCC
____________________________________________________________
consensus ATTGCATTGATACCAGCCTCTGCTATCGGAGCAGGAGTATCGAAATCGGGTTCTCCAGCC
. : . : . : . : . : . :
JMSF043K16+ GCTAATCTAATAACAGGAACTCCAGCCTGTGCTAGAGCAGTTGCTTGATCGGTTATAGCC
JMFF012K18+ GCTAATCTAATAACAGGAACTCCAGCCTGTGCTAGAGCAGTTGCTTGATCGGTTATAGCC
JMFF035I14+ GCTAATCTAATAACAGGAACTCCAGCCTGTGCTAGAGCAGTTGCTTGATCGGTTATAGCC
JMFF012L01+ GGAACTCCAGCCTGTGCTAGAGCAGTTGCTTGATCGGTTATAGCC
____________________________________________________________
consensus GCTAATCTAATAACAGGAACTCCAGCCTGTGCTAGAGCAGTTGCTTGATCGGTTATAGCC
. : . : . : . : . : . :
JMSF043K16+ ACGGTTTTTGACGGCTTCACTGCATTCACTCTGGGGCTTAGAGAGATATCGACCTCCATA
JMFF029H07+ GGGGCTTAGAGAGATATCGACCTCCATA
JMFF012K18+ ACGGTTTTTGACGGCTTCACTGCATTCACTCTGGGGCTTAGAGAGATATCGACCTCCATA
JMFF035I14+ ACGGTTTTTGACGGCTTCACTGCATTCACTCTGGGGCTTAGAGAGATATCGACCTCCATA
JMFF012L01+ ACGGTTTTTGACGGCTTCACTGCATTCACTCTGGGGCTTAGAGAGATATCGACCTCCATA
____________________________________________________________
consensus ACGGTTTTTGACGGCTTCACTGCATTCACTCTGGGGCTTAGAGAGATATCGACCTCCATA
. : . : . : . : . : . :
JMSF043K16+ CTGCAGCGAACTCTAGCAACCTGATTTACGCTACTTGGATACGTTTGCCTCTTTGACTCC
JMFF029H07+ CTGCAGCGAACTCTAGCAACCTGATTTACGCTACTTGGATACGTTTGCCTCTTTGACTCC
JMFF012K18+ CTGCAGCGAACTCTAGCAACCTGATTTACGCTACTTGGATACGTTTGCCTCTTTGACTCC
JMFF035I14+ CTGCAGCGAACTCTAGCAACCTGATTTACGCTACTTGGATACGTTTGCCTCTTTGACTCC
JMFF012L01+ CTGCAGCGAACTCTAGCAACCTGATTTACGCTACTTGGATACGTTTGCCTCTTTGACTCC
____________________________________________________________
consensus CTGCAGCGAACTCTAGCAACCTGATTTACGCTACTTGGATACGTTTGCCTCTTTGACTCC
. : . : . : . : . : . :
JMSF043K16+ AAAGATCTGAGGCTAATCGAGTTTAGCCGGGAAGAGAAAGAGAGTGATCTGAAGCTCTGA
JMFF029H07+ AAAGATCTGAGGCTAATCGAGTTTAGCCGGGAAGAGAAAGAGAGTGATCTGAAGCTCTGA
JMFF012K18+ AAAGATCTGAGGCTAATCGAGTTTAGCCGGGAAGAGAAAGAGAGTGATCTGAAGCTCTGA
JMFF035I14+ AAAGATCTGAGGCTAATCGAGTTTAGCCGGGAAGAGAAAGAGAGTGATCTGAAGCTCTGA
JMFF012L01+ AAAGATCTGAGGCTAATCGAGTTTAGCCGGGAAGAGAAAGAGAGTGATCTGAAGCTCTGA
____________________________________________________________
consensus AAAGATCTGAGGCTAATCGAGTTTAGCCGGGAAGAGAAAGAGAGTGATCTGAAGCTCTGA
. : . : . : . : . : . :
JMSF043K16+ GAATCTGGGTAAGTTGTAGCTGGCCTGGGCGCAACACCGGGAGATGAAGAGCCAAAAAAT
JMFF029H07+ GAATCTGGGTAAGTTGTAGCTGGCCTGGGCGCAACACCGGGAGATGAAGAGCCAAAAAAT
JMFF012K18+ GAATCTGGGTAAGTTGTAGCTGGCCTGGGCGCAACACCGGGAGATGAAGAGCCAAAAAAT
JMFF035I14+ GAATCTGGGTAAGTTGTAGCTGGCCTGGGCGCAACACCGGGAGATGAAGAGCCAAAAAAT
JMFF012L01+ GAATCTGGGTAAGTTGTAGCTGGCCTGGGCGCAACACCGGGAGATGAAGAGCCAAAAAAT
____________________________________________________________
consensus GAATCTGGGTAAGTTGTAGCTGGCCTGGGCGCAACACCGGGAGATGAAGAGCCAAAAAAT
. : . : . : . : . : . :
JMSF043K16+ TGCAGAGAATTGGAAGCCGTGGCCATTAGGAGAGATTGGTTCCCGGTTTAGCGAAAGTGA
JMFF029H07+ TGCAGAGAATTGGAAGCCGTGGCCATTAGGAGAGATTGGTTCCCGGTTTAGCGAAAGTGA
JMFF012K18+ TGCAGAGAATTGGAAGCCGTGGCCATTAGGAGAGATTGGTTCCCGGTTTAGCGAAAGTGA
JMFF035I14+ TGCAGAGAATTGGAAGCCGTGGCCATTAGGAGAGATTGGTTCCCGGTTTAGCGAAAGTGA
JMFF012L01+ TGCAGAGAATTGGAAGCCGTGGCCATTAGGAGAGATTGGTTCCCGGTTTAGCGAAAGTGA
____________________________________________________________
consensus TGCAGAGAATTGGAAGCCGTGGCCATTAGGAGAGATTGGTTCCCGGTTTAGCGAAAGTGA
. : . : . : . : . : . :
JMSF043K16+ TGAACTGCTGGTAGAATCGCATAGATAAAAAGATTGGGGTTGGTGAGTCTAAAATTAGGC
JMFF029H07+ TGAACTGCTGGTAGAATCGCATAGATAAAAAGATTGGGGTTGGTGAGTCTAAAATTAGGC
JMFF012K18+ TGAACTGCTGGTAGAATCGCATAGATAAAAAGATTGGGGTTGGTGAGTCTAAAATTAGGC
JMFF035I14+ TGAACTGCTGGTAGAATCGCATAGATAAAAAGATTGGGGTTGGTGAGTCTAAAATTAGGC
JMFF012L01+ TGAACTGCTGGTAGAATCGCATAGATAAAAAGATTGGGGTTGGTGAGTCTAAAATTAGGC
____________________________________________________________
consensus TGAACTGCTGGTAGAATCGCATAGATAAAAAGATTGGGGTTGGTGAGTCTAAAATTAGGC
. : . : . : . : . : . :
JMSF043K16+ GGGCGAAGAAGGGTTGTTGGAAGAGAGAAGAGTATGCATAA
JMFF029H07+ GGGCGAAGAAGGGTTGTTGGAAGAGAGAAGAGTATGCATAA
JMFF012K18+ GGGCGAAGAAGGGTTGTTGGAAGAGAGAAGAGTATGCATAA
JMFF035I14+ GGGCGAAGAAGGGTTGTTGGAAGAGAGAAGAGTATGCATAACAACTCTGGGACAGGGGTT
JMFF012L01+ GGGCGAAGAAGGGTTGTTGGAAGAGAGAAGAGTATGCATAACAACTCTGGGACAGGGGTT
____________________________________________________________
consensus GGGCGAAGAAGGGTTGTTGGAAGAGAGAAGAGTATGCATAACAACTCTGGGACAGGGGTT