Contig 010181:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012J08Sequence511010181 (2)ref|XP_009801394.1|247PREDICTED: uncharacterized protein LOC104247137 [Nicotiana sylvestris]708010181 (2)ref|XP_009598820.1|159PREDICTED: uncharacterized protein LOC104094563 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF012J08-                                                               ATTTTTT
                      ____________________________________________________________
consensus                                                                  ATTTTTT
 
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rJMFF012J08-          TTTTTATTTTATTGATACAAGAAAAGAGTAAAAAATAACTACAAGAGAAGAACTAAACCA
                      ____________________________________________________________
consensus             TTTTTATTTTATTGATACAAGAAAAGAGTAAAAAATAACTACAAGAGAAGAACTAAACCA
 
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rJMFF012J08-          CTCCGGGATTGACGGCTTGTCAACCTCAACAATGTTCACGAGCGTAANANACTTGATACC
                      ____________________________________________________________
consensus             CTCCGGGATTGACGGCTTGTCAACCTCAACAATGTTCACGAGCGTAANANACTTGATACC
 
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rJMFF012J08-          TTAAAAAGGAAGTTAAAGAAAAAAAGTCCATATTAAAAAAGTCGATTATCGTTTGTCTGA
                      ____________________________________________________________
consensus             TTAAAAAGGAAGTTAAAGAAAAAAAGTCCATATTAAAAAAGTCGATTATCGTTTGTCTGA
 
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rJMFF012J08-          ACACCATGTGTGACGGGAGCTTTTGCTCTCACTCTTCTTAGGTACCAAACTCCTGCTCCT
                      ____________________________________________________________
consensus             ACACCATGTGTGACGGGAGCTTTTGCTCTCACTCTTCTTAGGTACCAAACTCCTGCTCCT
 
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rJMFF012J08-          AATCCAATTGCCCCTGCCACTGATACTGCTGTAGCTGCTACTACTTTGGACATCTTGTGC
                      ____________________________________________________________
consensus             AATCCAATTGCCCCTGCCACTGATACTGCTGTAGCTGCTACTACTTTGGACATCTTGTGC
 
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rJMFF012J08-          CGAGTATCAAAGCAATTAGNGGNGCTGTTGCCTTTGTCACAAATACACAANAAATCCTGC
                      ____________________________________________________________
consensus             CGAGTATCAAAGCAATTAGNGGNGCTGTTGCCTTTGTCACAAATACACAANAAATCCTGC
 
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rJMFF012J08-          GTCTCAATATCAAACCCACACGTCCCGCCGCCCTTAGTAACATCTTGGCACTCCAAGCAC
                      ____________________________________________________________
consensus             GTCTCAATATCAAACCCACACGTCCCGCCGCCCTTAGTAACATCTTGGCACTCCAAGCAC
 
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rJMFF012J08-          TTCGCCGTCACCGGAAATATCGAAGTCCACCCGGACGCCGTACTCCGGCACCTGGTTAAA
                      ____________________________________________________________
consensus             TTCGCCGTCACCGGAAATATCGAAGTCCACCCGGACGCCGTACTCCGGCACCTGGTTAAA
 
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rJMFF012J08-          CGCCGGCGTGGCGTCCAGGTTCCGCCAGTACACCCCCGTGTACGACGCGCAGTGGCGCAG
                      ____________________________________________________________
consensus             CGCCGGCGTGGCGTCCAGGTTCCGCCAGTACACCCCCGTGTACGACGCGCAGTGGCGCAG
 
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rJMFF012J08-          CATCAGCCTCAGCGACTCCGCCGCCTTGGGGTAGTACNAGCAGCAGGAGCTGCCGCCGCG
                      ____________________________________________________________
consensus             CATCAGCCTCAGCGACTCCGCCGCCTTGGGGTAGTACNAGCAGCAGGAGCTGCCGCCGCG
 
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rJMFF012J08-          CAGGGCGGAGGGGCACTCCGGCAGGTGGCGGCACAGGAAACTGGCGCTGTCGCACGTCGA
JMFF012J08+                                        GGCACAGGAAACTGGCGCTGTCGCACGTCGA
                      ____________________________________________________________
consensus             CAGGGCGGAGGGGCACTCCGGCAGGTGGCGGCACAGGAAACTGGCGCTGTCGCACGTCGA
 
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rJMFF012J08-          GTCGCACTGCTCCGGGAAGCGCTCGCAAAACGCCGGCTTCG                   
JMFF012J08+           GTCGCACTGCTCCGGGAAGCGCTCGCAGAACGCCGGCTTCGGCTCCACGATCACCTTCTC
                      ____________________________________________________________
consensus             GTCGCACTGCTCCGGGAAGCGCTCGCAGAACGCCGGCTTCGGCTCCACGATCACCTTCTC
 
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JMFF012J08+           GCCGCTGCAGTTGAAGAACAGATAATCGTTCTGCGGCGAGAGGCTCAAGTGGGTGCTCGT
                      ____________________________________________________________
consensus             GCCGCTGCAGTTGAAGAACAGATAATCGTTCTGCGGCGAGAGGCTCAAGTGGGTGCTCGT
 
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JMFF012J08+           GTCCAGGCTGAACGGCCTCGTCGGCCTGAAATCCTCGCCGTCCTCGCAGCTCCACATGAA
                      ____________________________________________________________
consensus             GTCCAGGCTGAACGGCCTCGTCGGCCTGAAATCCTCGCCGTCCTCGCAGCTCCACATGAA
 
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JMFF012J08+           CGGATCAGTTACCAGAATGTGCGGGTCGGAATAGCTCACGTTCTTTATCGGGTACCTCCC
                      ____________________________________________________________
consensus             CGGATCAGTTACCAGAATGTGCGGGTCGGAATAGCTCACGTTCTTTATCGGGTACCTCCC
 
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JMFF012J08+           GGACGGTGTCCGGAGCTGCAGGTCGCCGGCGGTGCAGGTGATAATGTGGCGGTAGTATGG
                      ____________________________________________________________
consensus             GGACGGTGTCCGGAGCTGCAGGTCGCCGGCGGTGCAGGTGATAATGTGGCGGTAGTATGG
 
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JMFF012J08+           GCTGCCGCAGCCGTCGTCGATGCCCAAAGGGTACTGAATAGGAATGTCTCCACACCATTT
                      ____________________________________________________________
consensus             GCTGCCGCAGCCGTCGTCGATGCCCAAAGGGTACTGAATAGGAATGTCTCCACACCATTT
 
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JMFF012J08+           TCTGCAGACATTTTCGTGAGATTTTGCGAGCTGCAGAAATGGGGAGAAGAACAGAAAAAT
                      ____________________________________________________________
consensus             TCTGCAGACATTTTCGTGAGATTTTGCGAGCTGCAGAAATGGGGAGAAGAACAGAAAAAT
 
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JMFF012J08+           GGCGGCGATGAAAGATGGGGAAGAAGCCATAGATAATGGTTAAGGCCGGAAGGTGAAGAT
                      ____________________________________________________________
consensus             GGCGGCGATGAAAGATGGGGAAGAAGCCATAGATAATGGTTAAGGCCGGAAGGTGAAGAT