Contig 010176:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H08Sequence412010176 (3)730001480 (2)ref|NP_001267978.1|9e-73GEM-like 1 [Vitis vinifera] gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
JMFN035A10Sequence617010176 (3)emb|CDP11469.1|2e-50unnamed protein product [Coffea canephora]
JMFS096E04Sequence617010176 (3)

Alignment

This contig is upended


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JMFS096E04+                     GATCCTAACACATTCTTCATTGTATCCATTGTATCTGGCAAATAACAAAG
                      ____________________________________________________________
consensus                       GATCCTAACACATTCTTCATTGTATCCATTGTATCTGGCAAATAACAAAG
 
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JMFS096E04+           CAATAATGCATAAAAATTAGTTTTCCAATTAAACCACATCAATTAACAGGTATTTACGAT
                      ____________________________________________________________
consensus             CAATAATGCATAAAAATTAGTTTTCCAATTAAACCACATCAATTAACAGGTATTTACGAT
 
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JMFS096E04+           AGATAAAAGAAATTCAAATAAATTGATATTAATATCAAATCATCCTGTGTCAATTCCTAT
                      ____________________________________________________________
consensus             AGATAAAAGAAATTCAAATAAATTGATATTAATATCAAATCATCCTGTGTCAATTCCTAT
 
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JMFS096E04+           TCAAATCGATATAATGAATAGAGGAAACAAAGATTTAGGGTTCATTAATAAGGGGAAATG
                      ____________________________________________________________
consensus             TCAAATCGATATAATGAATAGAGGAAACAAAGATTTAGGGTTCATTAATAAGGGGAAATG
 
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JMFS096E04+           AGCTCACTTTTAACGGAGGAACCGGGTCCGGATGCGGGAGCAGGGGAGACGTAAGGGTTG
JMFN035A10+                  TTTTAACGGAGGAACCGGGTCCGGATGCGGGAGCAGGGGAGACGTAAGGGTTG
JMFF010H08+                   TTTAACGGAGGAACCGGGTCCGGATGCGGGAGCAGGGGAGACGTAAGGGTTG
                      ____________________________________________________________
consensus             AGCTCACTTTTAACGGAGGAACCGGGTCCGGATGCGGGAGCAGGGGAGACGTAAGGGTTG
 
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JMFS096E04+           GACTCGGGTGGCATGGTGGTAGCGGCGTAGCCGGCGACAGGGGCGGGGCCTCCGGCAGCC
JMFN035A10+           GACTCGGGTGGCATGGTGGTAGCGGCGTAGCCGGCGACAGGGGCGGGGCCTCCGGCAGCC
JMFF010H08+           GACTCGGGTGGCATGGTGGTAGCGGCGTAGCCGGCGACAGGGGCGGGGCCTCCGGCAGCC
                      ____________________________________________________________
consensus             GACTCGGGTGGCATGGTGGTAGCGGCGTAGCCGGCGACAGGGGCGGGGCCTCCGGCAGCC
 
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JMFS096E04+           GGCGGTGACCTAGACTGCTGCAGGGGAGGATCTGAAGCGAGGGAGACCGGAACGGTGTCG
JMFN035A10+           GGCGGTGACCTAGACTGCTGCAGGGGAGGATCTGAAGCGAGGGAGACCGGAACGGTGTCG
JMFF010H08+           GGCGGTGACCTAGACTGCTGCAGGGGAGGATCTGAAGCGAGGGAGACCGGAACGGTGTCG
                      ____________________________________________________________
consensus             GGCGGTGACCTAGACTGCTGCAGGGGAGGATCTGAAGCGAGGGAGACCGGAACGGTGTCG
 
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JMFS096E04+           TTCGGGTCGAGCTTGGGGTAGGGAGCGTAGTCAGATGATTGAGATTGGGGTTCCGGTTTT
JMFN035A10+           TTCGGGTCGAGCTTGGGGTAGGGAGCGTAGTCAGATGATTGAGATTGGGGTTCCGGTTTT
JMFF010H08+           TTCGGGTCGAGCTTGGGGTAGGGAGCGTAGTCAGATGATTGAGATTGGGGTTCCGGTTTT
                      ____________________________________________________________
consensus             TTCGGGTCGAGCTTGGGGTAGGGAGCGTAGTCAGATGATTGAGATTGGGGTTCCGGTTTT
 
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JMFS096E04+           GGGGGTTGGGTTTGGGAATGATCGGCCGCCGGCGCCGGAATCGGGTCAGAGCTCATAACG
JMFN035A10+           GGGGGTTGGGTTTGGGAATGATCGGCCGCCGGCGCCGGAATCGGGTCAGAGCTCATAACG
JMFF010H08+           GGGGGTTGGGTTTGGGAATGATCGGCCGCCGGCGCCGGAATCGGGTCAGAGCTCATAACG
                      ____________________________________________________________
consensus             GGGGGTTGGGTTTGGGAATGATCGGCCGCCGGCGCCGGAATCGGGTCAGAGCTCATAACG
 
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JMFS096E04+           TATGGCGAAAACTTTGACGACTTTTGGCCTATAGATTTCGTGGCAGGACGGAGAATTCGG
JMFN035A10+           TATGGCGAAAACTTTGACGACTTTTGGCCTATAGATTTCGTGGCAGGACGGAGAATTCGG
JMFF010H08+           TATGGCGAAAACTTTGACGACTTTTGGCCTATAGATTTCGTGGCAGGACGGAGAATTCGG
                      ____________________________________________________________
consensus             TATGGCGAAAACTTTGACGACTTTTGGCCTATAGATTTCGTGGCAGGACGGAGAATTCGG
 
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JMFS096E04+           GATTCCAGAAGGTTCTCTCTCTCTCTC                                 
JMFN035A10+           GATTCCAGAAGGTTCTCTCTCTCTCTC                                 
JMFF010H08+           GATTCCAGAAGGTTCTCTCTCTCTCTCTCTCTCTCTGAAGATGCCAGCGAGGATGAAGAC
                      ____________________________________________________________
consensus             GATTCCAGAAGGTTCTCTCTCTCTCTCTCTCTCTCTGAAGATGCCAGCGAGGATGAAGAC