Contig 010175:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009O10Sequence588010175 (4)ref|XP_004233461.1|6e-82PREDICTED: ADP-ribosylation factor-like protein 8A [Solanum lycopersicum]712010175 (4)ref|XP_007047542.1|3e-114ADP-ribosylation factor-like A1C isoform 1 [Theobroma cacao] gb|EOX91699.1| ADP-
JMFN011M13Sequence636010175 (4)ref|XP_009786347.1|8e-107PREDICTED: ADP-ribosylation factor-like protein 8A [Nicotiana sylvestris] ref|X
JMSF005D14Sequence324010175 (4)gb|KJB79004.1|4e-27hypothetical protein B456_013G050700 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009O10- TCTTTCTTTAGAAAACTAGTATTCAAAACAGGTAGAAATACACTCATAAAT
                      ____________________________________________________________
consensus TCTTTCTTTAGAAAACTAGTATTCAAAACAGGTAGAAATACACTCATAAAT
 
. : . : . : . : . : . :
rJMFF009O10- AGAAAAATAGTTAACTCTCTGAATTAACGAAATAATTTAATATACATTGCGACATAACTG
                      ____________________________________________________________
consensus AGAAAAATAGTTAACTCTCTGAATTAACGAAATAATTTAATATACATTGCGACATAACTG
 
. : . : . : . : . : . :
rJMFF009O10- GAAAGAAACCAGAGCACAACAACCAGCCCATCTCTCATGAATGTAAGGTGCAATTAGAAG
                      ____________________________________________________________
consensus GAAAGAAACCAGAGCACAACAACCAGCCCATCTCTCATGAATGTAAGGTGCAATTAGAAG
 
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rJMFF009O10- TGGTTGAAACTCATCTTCAACTCTTGGACTTGGAGTGTTTAACCAGCCAATCGATAACAG
                      ____________________________________________________________
consensus TGGTTGAAACTCATCTTCAACTCTTGGACTTGGAGTGTTTAACCAGCCAATCGATAACAG
 
. : . : . : . : . : . :
rJMFF009O10- AGTCGATATTGGTAGAGTTCTTGCAAGAGATCATGAAGCAGCAAACCTCTCGGTCAGTTA
JMFN011M13+ ATGAAGCAGCAAACCTCTCGGTCAGTTA
                      ____________________________________________________________
consensus AGTCGATATTGGTAGAGTTCTTGCAAGAGATCATGAAGCAGCAAACCTCTCGGTCAGTTA
 
. : . : . : . : . : . :
rJMFF009O10- TTGATTTCAGTCCCATCTGATCAGTCAAAGCTTGCTTGGATAAGGCACCAGGTTTGTCAA
JMFN011M13+ TTGATTTCAGTCCCATTTGATCAGTCAAAGCTGNCTTGGATAAGGCACCAGGTTTGTCAA
                      ____________________________________________________________
consensus TTGATTTCAGTCCCATTTGATCAGTCAAAGCTTGCTTGGATAAGGCACCAGGTTTGTCAA
 
. : . : . : . : . : . :
rJMFF009O10- TCTTGTTGCCCAATACGAGCAATGGGATTCCGCTCAATGATTGCTTGCTCAGAAGGTCAT
JMFN011M13+ TCTTGTTGCCCAATACGAGCAATGGGATTCCGCTCAATGATTGCTTGCTCAGAAGGTCAT
JMFF009O10+ ACGAGCAATGGGATTCCGCTCAATGATTGCTTGCTCAGAAGGTCAT
                      ____________________________________________________________
consensus TCTTGTTGCCCAATACGAGCAATGGGATTCCGCTCAATGATTGCTTGCTCAGAAGGTCAT
 
. : . : . : . : . : . :
rJMFF009O10- GGAGTTCGCTCTTTGAAATGCTGAAGTTATCACCATCAGCAGCGTCCACAACATAAACTA
JMFN011M13+ GGAGTTCGCTCTTTGAAATGCTGAAGTTATCACCATCAGCAGCGTCCACAACATAAACTA
JMFF009O10+ GGAGTTCGCTCTTTGAAATGCTGAAGTTATCACCATCAGCAGCGTCCACAACATAAACTA
                      ____________________________________________________________
consensus GGAGTTCGCTCTTTGAAATGCTGAAGTTATCACCATCAGCAGCGTCCACAACATAAACTA
 
. : . : . : . : . : . :
rJMFF009O10- TAGCAGAAACTGCACGACAGTATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCAA
JMFN011M13+ TAGCAGAAACTGCACGACAGTATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCAA
JMFF009O10+ TAGCAGAAACTGCACGACAGTATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCAA
                      ____________________________________________________________
consensus TAGCAGAAACTGCACGACAGTATCTCTCCCACATACTACGGAATCTTGGTTGACCTCCAA
 
. : . : . : . : . : . :
rJMFF009O10- GATCCCACAACTTTATGGTGACATTGCCTTTAGTCACCTTTCGCATATTAAATCCCACCG
JMFN011M13+ GATCCCACAACTTTATGGTGACATTGCCTTTAGTCACCTTTCGCATATTAAATCCCACCG
JMSF005D14+ CCG
JMFF009O10+ GATCCCACAACTTTATGGTGACATTGCCTTTAGTCACCTTTCGCATATTAAATCCCACCG
                      ____________________________________________________________
consensus GATCCCACAACTTTATGGTGACATTGCCTTTAGTCACCTTTCGCATATTAAATCCCACCG
 
. : . : . : . : . : . :
rJMFF009O10- TTGGTATCATGTCTTCACTATATCCACCAGTAGCAATAACATTTACAAGAGAAGTTTTTC
JMFN011M13+ TTGGTATCATGTCTTCACTATATCCACCAGTAGCAATAACATTTACAAGAGAAGTTTTTC
JMSF005D14+ TTGGTATCATGTCTTCACTATATCCACCAGTAGCAATAACATTTACAAGAGAAGTTTTTC
JMFF009O10+ TTGGTATCATGTCTTCACTATATCCACCAGTAGCAATAACATTTACAAGAGAAGTTTTTC
                      ____________________________________________________________
consensus TTGGTATCATGTCTTCACTATATCCACCAGTAGCAATAACATTTACAAGAGAAGTTTTTC
 
. : . : . : . : . : . :
rJMFF009O10- CTGCATTCTGCAGCCCTATCAAAGAAAGCTCCATTTCCTGCTTGAAAAAGAGGCTTC
JMFN011M13+ CTGCATTCTGCAGCCCTATCAAAGAAAGCTCCATTTCCTGCTTGAAAAAGAGGCTTCTTA
JMSF005D14+ CTGCATTCTGCAGCCCTATCAAAGAAAGCTCCATTTCCTGCTTGAAAAAGAGGCTTCTTA
JMFF009O10+ CTGCATTCTGCAGCCCTATCAAAGAAAGCTCCATTTCCTGCTTGAAAAAGAGGCTTCTTA
                      ____________________________________________________________
consensus CTGCATTCTGCAGCCCTATCAAAGAAAGCTCCATTTCCTGCTTGAAAAAGAGGCTTCTTA
 
. : . : . : . : . : . :
JMFN011M13+ GCCAATTCAGAAAAGCTTCCCAGAGACCCATGGC
JMSF005D14+ GCCAATTCAGAAAAGCTTCCCAGAGACCCATGGC
JMFF009O10+ GCCAATTCAGAAAAGCTTCCCAGAGACCCATGGCTGACACAGACGCGAGGAATCGGAAAC
                      ____________________________________________________________
consensus GCCAATTCAGAAAAGCTTCCCAGAGACCCATGGCTGACACAGACGCGAGGAATCGGAAAC
 
. : . : . : . : . : . :
JMFF009O10+ GCGAAGAGAGAGAGAGAGAGAGATCTGCAAAAATCCGAGTTTGGAAAGCAGAGAGATCTC
                      ____________________________________________________________
consensus GCGAAGAGAGAGAGAGAGAGAGATCTGCAAAAATCCGAGTTTGGAAAGCAGAGAGATCTC
 
. : . : . : . : . : . :
JMFF009O10+ TCTGAGAGAGACACTCCCTTTCTGATCCTAAACTCCGAATCGAAACTCCGCTAATGATTA
                      ____________________________________________________________
consensus TCTGAGAGAGACACTCCCTTTCTGATCCTAAACTCCGAATCGAAACTCCGCTAATGATTA
 
. : . : . : . : . : . :
JMFF009O10+ TCGTACGTAAAAATCAGCATATGCTGTGTGCCAAAAAACAGCGAATTTATCATTCATCGC
                      ____________________________________________________________
consensus TCGTACGTAAAAATCAGCATATGCTGTGTGCCAAAAAACAGCGAATTTATCATTCATCGC