Contig 010153:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006F08Sequence552010153 (2)emb|CDP05859.1|4e-79unnamed protein product [Coffea canephora]650003946 (3)ref|XP_009591587.1|6e-31PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Nic
JMSF021M21Sequence650010153 (2)ref|XP_009591587.1|6e-101PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Nic744003946 (3)ref|XP_009591587.1|2e-42PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Nic

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021M21+ GACATTTTTCCTTTCACCAGATAAGTGGCCAGAGTTGTTTGCA
                      ____________________________________________________________
consensus GACATTTTTCCTTTCACCAGATAAGTGGCCAGAGTTGTTTGCA
 
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JMSF021M21+ TATCCGTGCCCACTTCTATCACTAGATTGTGGCCACTGGAGTGGAGCTCTCTCTTCACGT
                      ____________________________________________________________
consensus TATCCGTGCCCACTTCTATCACTAGATTGTGGCCACTGGAGTGGAGCTCTCTCTTCACGT
 
. : . : . : . : . : . :
JMSF021M21+ ACACTGGACACCGATGCTGGTTTCCCATCCTTAGGGGCCCATCTCTTCTCTTCATACTTT
JMFF006F08+ TCTTCATACTTT
                      ____________________________________________________________
consensus ACACTGGACACCGATGCTGGTTTCCCATCCTTAGGGGCCCATCTCTTCTCTTCATACTTT
 
. : . : . : . : . : . :
JMSF021M21+ GCACGGATGAAATTCTCAATTCCAACTCTATCATAGTTTGGAGGTAGCTCTGCTTCCCAG
JMFF006F08+ GCACGGATGAAATTCTCAATTCCAACTCTATCATAGTTTGGAGGTAGCTCTGCTTCCCAG
                      ____________________________________________________________
consensus GCACGGATGAAATTCTCAATTCCAACTCTATCATAGTTTGGAGGTAGCTCTGCTTCCCAG
 
. : . : . : . : . : . :
JMSF021M21+ TAACTATTTGATTTCTCATTTCCCATTGATTGAATAAATGCAACTTGTTCAGGAAGCCAT
JMFF006F08+ TAACTATTTGATTTCTCATTTCCCATTGATTGAATAAATGCAACTTGTTCAGGAAGCCAT
                      ____________________________________________________________
consensus TAACTATTTGATTTCTCATTTCCCATTGATTGAATAAATGCAACTTGTTCAGGAAGCCAT
 
. : . : . : . : . : . :
JMSF021M21+ GTATCAAGTGTAGCTGATCTAACCTTTGATATGTGCACTCCGAGACTTCTGTGGATCCCA
JMFF006F08+ GTATCAAGTGTAGCTGATCTAACCTTTGATATGTGCACTCCGAGACTTCTGTGGATCCCA
                      ____________________________________________________________
consensus GTATCAAGTGTAGCTGATCTAACCTTTGATATGTGCACTCCGAGACTTCTGTGGATCCCA
 
. : . : . : . : . : . :
JMSF021M21+ GAGCACTGCATGCATATAAAGATCCCTAAATTCACACTAGCCCATCGTGGACCTTTCACT
JMFF006F08+ GAGCACTGCATGCATATAAAGATCCCTAAATTCACACTAGCCCATCGTGGACCTTTCACT
                      ____________________________________________________________
consensus GAGCACTGCATGCATATAAAGATCCCTAAATTCACACTAGCCCATCGTGGACCTTTCACT
 
. : . : . : . : . : . :
JMSF021M21+ TTGCAATCTGCACATTCTCTGTTCTCGGGCAATTTGAGCAGACCTTCTAGAATCTTTCTG
JMFF006F08+ TTGCAATCTGCACATTCTCTGTTCTCGGGCAATTTGAGCAGACCTTCTAGAATCTTTCTG
                      ____________________________________________________________
consensus TTGCAATCTGCACATTCTCTGTTCTCGGGCAATTTGAGCAGACCTTCTAGAATCTTTCTG
 
. : . : . : . : . : . :
JMSF021M21+ TGCTTGGCATTGAGCTCCTTGGATACGTTAGCCTTCTCATTCATGGTGGCTAAGATGGAT
JMFF006F08+ TGCTTGGCATTGAGCTCCTTGGATACGTTAGCCTTCTCATTCATGGTGGCTAAGATGGAT
                      ____________________________________________________________
consensus TGCTTGGCATTGAGCTCCTTGGATACGTTAGCCTTCTCATTCATGGTGGCTAAGATGGAT
 
. : . : . : . : . : . :
JMSF021M21+ GAGTTCTAACTTGAACAGATGGAGAGAGAAGAAGAGGAGGAGGCGATGAAGAATGAACGA
JMFF006F08+ GAGTTCTAACTTGAACAGATGGAGAGAGAAGAAGAGGAGGAGGCGATGAAGAATGAACGA
                      ____________________________________________________________
consensus GAGTTCTAACTTGAACAGATGGAGAGAGAAGAAGAGGAGGAGGCGATGAAGAATGAACGA
 
. : . : . : . : . : . :
JMSF021M21+ CCGATCTTTCTCCTCTCTCCGTCGCTCTGGACCGCCGGATTGGAAGGCCGCCGATAAAAT
JMFF006F08+ CCGATCTTTCTCCTCTCTCCGTCGCTCTGGACCGCCGGATTGGAAGGCCGCCGATAAAAT
                      ____________________________________________________________
consensus CCGATCTTTCTCCTCTCTCCGTCGCTCTGGACCGCCGGATTGGAAGGCCGCCGATAAAAT
 
. : . : . : . : . : . :
JMSF021M21+ GAAGGT
JMFF006F08+ GAAGGTGGAAGAGAAAGGAGGAAAAACCGCACCGTCTGTCTGACTTATTTGCCGGTAATT
                      ____________________________________________________________
consensus GAAGGTGGAAGAGAAAGGAGGAAAAACCGCACCGTCTGTCTGACTTATTTGCCGGTAATT