| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006B13 | Sequence | 501 | 010152 (7) | ref|XP_006375578.1| | 3e-26 | hypothetical protein POPTR_0014s167301g, partial [Populus trichocarpa] gb|ERP533 | 764 | 012468 (7) | ref|XP_009761216.1| | 2e-108 | PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris] |
| JMFF013M16 | Sequence | 548 | 010152 (7) | ref|XP_006375578.1| | 1e-35 | hypothetical protein POPTR_0014s167301g, partial [Populus trichocarpa] gb|ERP533 | 776 | 012468 (7) | ref|XP_009761216.1| | 3e-117 | PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris] |
| JMFF015D10 | Sequence | 556 | 010152 (7) | gb|ACF17664.1| | 2e-38 | putative long-chain acyl-CoA synthetase [Capsicum annuum] | 710 | 012468 (7) | ref|XP_009761216.1| | 1e-92 | PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris] |
| JMFF035H09 | Sequence | 575 | 010152 (7) | gb|ACF17664.1| | 2e-39 | putative long-chain acyl-CoA synthetase [Capsicum annuum] | 725 | 012468 (7) | ref|XP_009761216.1| | 3e-103 | PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris] |
| JMFF049F08 | Sequence | 642 | 010152 (7) | gb|ACF17664.1| | 5e-49 | putative long-chain acyl-CoA synthetase [Capsicum annuum] | 594 | 012468 (7) | ref|XP_009761216.1| | 3e-53 | PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris] |
| JMFS055A01 | Sequence | 542 | 010152 (7) | dbj|BAF46296.1| | 1e-67 | cytochrome P450 [Ipomoea nil] | |||||
| JMSF007A20 | Sequence | 317 | 010152 (7) | 777 | 012468 (7) | ref|XP_009761216.1| | 3e-104 | PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
JMFS055A01+ GAAAGA
____________________________________________________________
consensus GAAAGA
. : . : . : . : . : . :
JMFS055A01+ TAGATAGATATGATGATGGCAATCTGCAGCACAGCGGTTGCATTCATTTTTATTATCGTA
____________________________________________________________
consensus TAGATAGATATGATGATGGCAATCTGCAGCACAGCGGTTGCATTCATTTTTATTATCGTA
. : . : . : . : . : . :
JMFS055A01+ CTTAGCTTGGGTTGTTATATGATTCTGAAATTGAGGTGCCGGTCCTCCGATGATAAGGTT
____________________________________________________________
consensus CTTAGCTTGGGTTGTTATATGATTCTGAAATTGAGGTGCCGGTCCTCCGATGATAAGGTT
. : . : . : . : . : . :
JMFS055A01+ GTTCCTAGGAACTGGCCACTAGTTGGAATGATGCCGGCGCTTCTTAAGAATGCTCACCGA
____________________________________________________________
consensus GTTCCTAGGAACTGGCCACTAGTTGGAATGATGCCGGCGCTTCTTAAGAATGCTCACCGA
. : . : . : . : . : . :
JMFS055A01+ GTCCACGAATTCGCGACTGATGTTCTGAAACACAGCGGAGGGACATTTGAGTTTAAAGGT
____________________________________________________________
consensus GTCCACGAATTCGCGACTGATGTTCTGAAACACAGCGGAGGGACATTTGAGTTTAAAGGT
. : . : . : . : . : . :
JMFS055A01+ CCAGCTGCCTTTGCTAACTTGAGCATGCTGGCTACCAGCGACCCTGCTAACATCCACCAT
____________________________________________________________
consensus CCAGCTGCCTTTGCTAACTTGAGCATGCTGGCTACCAGCGACCCTGCTAACATCCACCAT
. : . : . : . : . : . :
JMFS055A01+ ATCCTCAGCAAAAACTTCTCCAACTATCCCAAGTGAAGCTTCTCAAACTTCCTTCCATCA
JMFF015D10+ AAGCTTCTCAAACTTCCTTCCATCA
JMFF013M16+ CTTCCTTCCATCA
JMFF035H09+ AAGCTTCTCAAACTTCCTTCCATCA
JMFF049F08+ CAAGTGAAGCTTCTCAAACTTCCTTCCATCA
____________________________________________________________
consensus ATCCTCAGCAAAAACTTCTCCAACTATCCCAAGTGAAGCTTCTCAAACTTCCTTCCATCA
. : . : . : . : . : . :
JMFS055A01+ CTTCCTGCTACAAATTCCCTACCTATTACTTTTCTTGTTCCAAGGAAACGTTCCCGCGAA
JMFF015D10+ CTTCCTGCTACAAATTCCCTACCTATTACTTTTCTTGTTCCAAGGAAACGTTCCCGCGAA
JMFF013M16+ CTTCCTGCTACAAATTCCCTACCTATTACTTTTCTTGTTCCAAGGAAACGTTCCCGCGAA
JMFF035H09+ CTTCCTGCTACAAATTCCCTACCTATTACTTTTCTTGTTCCAAGGAAACGTTCCCGCGAA
JMFF049F08+ CTTCCAGCTACAAATTCCCTACCTATTACTTTTCTTGTTCCAAGGAAACGTTCCCGCGAA
JMFF006B13+ CCAAGGAAACGTTCCCGCGAA
____________________________________________________________
consensus CTTCCTGCTACAAATTCCCTACCTATTACTTTTCTTGTTCCAAGGAAACGTTCCCGCGAA
. : . : . : . : . : . :
JMFS055A01+ TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
JMFF015D10+ TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
JMFF013M16+ TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
JMFF035H09+ TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
JMFF049F08+ TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
JMFF006B13+ TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
____________________________________________________________
consensus TGCTTTTTGCTGGACTGCTCAAATAGAGCTGCCACAGTAGTGGCACCTTCCCAGGGAACA
. : . : . : . : . : . :
JMFS055A01+ TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAAC
JMFF015D10+ TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAACTTCT
JMFF013M16+ TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAACTTCT
JMFF035H09+ TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAACTTCT
JMFF049F08+ TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAACTTCT
JMFF006B13+ TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAACTTCT
____________________________________________________________
consensus TCCACCAATTGGGTATACTTAGCATTACGCATTGCAAAACCTGCCTCACCACCAACTTCT
. : . : . : . : . : . :
JMFF015D10+ ACTGGAACCCCTCTCTTTCTTGACTTCTTCTTCCCTGAGAGGGCCATGGAAAGTATGATG
JMFF013M16+ ACTGGAACCCCTCTCTTTCTTGACTTCTTCTTCCCTGAGAGGGCCATGGAAAGTATGATG
JMFF035H09+ ACTGGAACCCCTCTCTTTCTTGACTTCTTCTTCCCTGAGAGGGCCATGGAAAGTATGATG
JMFF049F08+ ACTGGAACCCCTCTCTTTCTTGACTTCTTCTTCCCTGAGAGGGCCATGGAAAGTATGATG
JMSF007A20+ GCCATGGAAAGTATGATG
JMFF006B13+ ACTGGAACCCCTCTCTTTCTTGACTTCTTCTTCCCTGAGAGGGCCATGGAAAGTATGATG
____________________________________________________________
consensus ACTGGAACCCCTCTCTTTCTTGACTTCTTCTTCCCTGAGAGGGCCATGGAAAGTATGATG
. : . : . : . : . : . :
JMFF015D10+ GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
JMFF013M16+ GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
JMFF035H09+ GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
JMFF049F08+ GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
JMSF007A20+ GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
JMFF006B13+ GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
____________________________________________________________
consensus GGTATACTAATAGCAGCAATAACTGCAAATAGTTTAACATTATTATCAGTTGTCCCCAAA
. : . : . : . : . : . :
JMFF015D10+ ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
JMFF013M16+ ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
JMFF035H09+ ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
JMFF049F08+ ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
JMSF007A20+ ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
JMFF006B13+ ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
____________________________________________________________
consensus ATAGTTGTATTTGGGGTACTTCCTTCAGGCCCTTCCATTTTGCAATCTATATGCTTCTCC
. : . : . : . : . : . :
JMFF015D10+ TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
JMFF013M16+ TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
JMFF035H09+ TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
JMFF049F08+ TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
JMSF007A20+ TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
JMFF006B13+ TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
____________________________________________________________
consensus TTTTACAGAATGAGCAACTAAAGGGCAGCAAACAAAACGAACGCCGTGATCGTCAAGCTT
. : . : . : . : . : . :
JMFF015D10+ CCGAAATCCGCAACAACTCTAGCGGCTCTTCGAGAGTACGGCTAACGGTCTAGAGCTGCA
JMFF013M16+ CCGAAATCCGCAACAACTCTAGCGGCTCTTCGAGAGTACGGCTAACGGTCTAGAGCTGCA
JMFF035H09+ CCGAAATCCGCAACAACTCTAGCGGCT
JMFF049F08+ CCGAAATCCGCAACAACTCTAGCGGCTCTTCGAGAGTACGGCTAACGGTCTAGAGCTGCA
JMSF007A20+ CCGAAATCCGCAACAACTCTAGCGGCTCTTCGAGAGTACGGCTAACGGTCTAGAGCTGCA
JMFF006B13+ CCGAAATCCGCAACAACTCTAGCGGCTCTTCGAGAGTACGGCTAACGGTCTAGAGCTGCA
____________________________________________________________
consensus CCGAAATCCGCAACAACTCTAGCGGCTCTTCGAGAGTACGGCTAACGGTCTAGAGCTGCA
. : . : . : . : . : . :
JMFF015D10+ TTCCTGCGATAGGAAAAGTCGAGAAAGAAATCTTTCCAGAATAAGATGCTC
JMFF013M16+ TTCCTGCGATAGGAAAAGTCGAGAAAGAAATCTTTCCAGAATAAGATGCTCTTCT
JMFF049F08+ TTCCTGCGATAGGAAAAGTCGAGAAAGAAATCTTTCCAGAATAAGATGCTCTTCT
JMSF007A20+ TTCCTGCGATAGGAAAAGTCGAGAAAGAAATCTTTCCAGAATAAGATGCTCTTCT
JMFF006B13+ TTCCTGCGATAGGAAAAGTCGAGAAAGAAATCTTTCCAGAATAAGATGCTCTTCTGTGTT
____________________________________________________________
consensus TTCCTGCGATAGGAAAAGTCGAGAAAGAAATCTTTCCAGAATAAGATGCTCTTCTGTGTT