Contig 010142:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O10Sequence485010142 (6)emb|CDO97048.1|4e-47unnamed protein product [Coffea canephora]724010142 (6)emb|CDO97048.1|5e-46unnamed protein product [Coffea canephora]
JMFN011C10Sequence563010142 (6)emb|CDP22149.1|4e-17unnamed protein product [Coffea canephora]
JMFN037J14Sequence534010142 (6)
JMSF028M15Sequence687010142 (6)emb|CDO97048.1|6e-46unnamed protein product [Coffea canephora]724010142 (6)emb|CDO97048.1|1e-45unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN037J14+           AGCGCAAATCTCCATTATTTAATTCCATGGAACAACGTTAATACAGATTTACAATATAAC
JMFN011C10+                                          ACAACGTTAATACAGATTTACAATATAAC
rJMSF028M15-                                                  ATACAGATTTACAATATAAC
                      ____________________________________________________________
consensus             AGCGCAAATCTCCATTATTTAATTCCATGGAACAACGTTAATACAGATTTACAATATAAC
 
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JMFN037J14+           AGCAGCGATCAATATAGAAAGTGACACAGTCGAATACATCGCACGGAGAACCCATAACCA
JMFN011C10+           AGCAGCGATCAATATAGAAAGTGACACAGTCGAATACATCGCACGGAGAACCCATAACCA
JMSF028M15+                                                        GAGAACCCATAACCA
rJMFF004O10-                                 ACACAGTCGAATACATCGCACGGAGAACCCATAACCA
rJMSF028M15-          AGCAGCGATCAATATAGAAAGTGACACAGTCGAATACATCGCACGGAGAACCCATAACCA
                      ____________________________________________________________
consensus             AGCAGCGATCAATATAGAAAGTGACACAGTCGAATACATCGCACGGAGAACCCATAACCA
 
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JMFN037J14+           TAGCCAGAACTAAACGCAAACCAAGATCAAAAACATGAATTATCTATAAAATTTAGACCT
JMFN011C10+           TAGCCAGAACTAAACGCAAACCAAGATCAAAAACATGAATTATCTATAAAATTTAGACCT
JMSF028M15+           TAGCCAGAACTAAACGCAAACCAAGATCAAAAACATGAATTATCTATAAAATTTAGACCT
rJMFF004O10-          TAGCCAGAACTAAACGCAAACCAAGATCAAAAACATGAATTATCTATAAAATTTAGACCT
rJMSF028M15-          TAGCCAGAACTAAACGCAAACCAAGATCAAAAACATGAATTATCTATAAAATTTAGACCT
                      ____________________________________________________________
consensus             TAGCCAGAACTAAACGCAAACCAAGATCAAAAACATGAATTATCTATAAAATTTAGACCT
 
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JMFN037J14+           ACACCACCACTAATAAGATGGTGGCCTAATCGAAGATCAATTTAATTCCTCCAGCTTCCA
JMFN011C10+           ACACCACCACTAATAAGATGGTGGCCTAATCGAAGATCAATTTAATTCCTCCAGCTTCCA
JMSF028M15+           ACACCACCACTAATAAGATGGTGGCCTAATCGAAGATCAATTTAATTCCTCCAGCTTCCA
rJMFF004O10-          ACACCACCACTAATAAGATGGTGGCCTAATCGAAGATCAATTTAATTCCTCCAGCTTCCA
rJMSF028M15-          ACACCACCACTAATAAGATGGTGGCCTAATCGAAGATCAATTTAATTCCTCCAGCTTCCA
                      ____________________________________________________________
consensus             ACACCACCACTAATAAGATGGTGGCCTAATCGAAGATCAATTTAATTCCTCCAGCTTCCA
 
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JMFN037J14+           TCGGAAGAACCACCA-CCCCTAGAATAACCGCCACCATAACCGCGGTCGTTGCCGCCATA
JMFN011C10+           TCGGAAGAACCACCA-CCCCTAGAATAACCGCCACCATAACCGCGGTCGTTGCCGCCATA
JMSF028M15+           TCGGAAGAACCACCACCCCCTAGAATAACCGCCACCATAACCGCGGTCGTTGCCGCCATA
rJMFF004O10-          TCGGAAGAACCACCA-CCCCTAGAATAACCGCCACCATAACCGCGGTCGTTGCCGCCATA
rJMSF028M15-          TCGGAAGAACCACCA-CCCCTAGAATAACCGCCACCATAACCGCGGTCGTTGCCGCCATA
                      ____________________________________________________________
consensus             TCGGAAGAACCACCA-CCCCTAGAATAACCGCCACCATAACCGCGGTCGTTGCCGCCATA
 
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JMFN037J14+           TCCGCGGTCACCACCACCATAGCTACGGTCTCAACCGCCATATCCACGGTCACGGCCGCC
JMFN011C10+           TCCGCGGTCACCACCACCATAGCTACGGTCTCCACCGCCATATCCACGGTCACGGCCGCC
JMSF028M15+           TCCGCGGTCACCACCACCATAGCTACGGTCTCCACCGCCATATCCACGGTCACGGCCGCC
rJMFF004O10-          TCCGCGGTCACCACCACCATAGCTACGGTCTCCACCGCCATATCCACGGTCACGGCCGCC
rJMSF028M15-          TCCGCGGTCACCACCACCATAGCTACGGTCTCCACCGCCATATCCACGGTCACGGCCGCC
                      ____________________________________________________________
consensus             TCCGCGGTCACCACCACCATAGCTACGGTCTCCACCGCCATATCCACGGTCACGGCCGCC
 
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JMFN037J14+           ACCGTAACCTCCACCATAACCGCCTTCACGTCGACCGTATCCGCCTCCGCCTCCGCCCTC
JMFN011C10+           ACCGTAACCTCCACCATAACCGCCTTCACGTCGACCGTATCCGCCTCCGCCTCCGCCCTC
JMSF028M15+           ACCGTAACCTCCACCATAACCGCCTTCACGTCGACCGTATCCGCCTCCGCCTCCGCCCTC
rJMFF004O10-          ACCGTAACCTCCACCATAACCGCCTTCACGTCGACCGTATCCGCCTCCGCCTCCGCCCTC
rJMSF028M15-          ACCGTAACCTCCACCATAACCGCCTTCACGTCGACCGTATCCGCCTCCGCCTCCGCCCTC
JMFF004O10+                                                                  CCCTC
                      ____________________________________________________________
consensus             ACCGTAACCTCCACCATAACCGCCTTCACGTCGACCGTATCCGCCTCCGCCTCCGCCCTC
 
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JMFN037J14+           ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
JMFN011C10+           ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
JMSF028M15+           ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
rJMFF004O10-          ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
rJMSF028M15-          ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
JMFF004O10+           ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
                      ____________________________________________________________
consensus             ACGGCGACCACCACGGAAACCTCCGCCGCCGCCGCCGCTTCCGCGAGACTGTGCTTCATT
 
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JMFN037J14+           AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCC     
JMFN011C10+           AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCCCTCAT
JMSF028M15+           AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCCCTCAT
rJMFF004O10-          AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCCCTCAT
rJMSF028M15-          AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCCCTCAT
JMFF004O10+           AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCCCTCAT
                      ____________________________________________________________
consensus             AACGGTAATGTTACGGCCGTCTAGGTTTTGGCCATTCATAGCCTCGATGGCGTCCCTCAT
 
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JMFN011C10+           GGCATGTTCGTCCCTGAAGGTGACAAAGCCAAATCCCCTGGATCTACCAGTCTCA     
JMSF028M15+           GGCATGTTCGTCCCTGAAGGTGACAAAGCCAAATCCCCTGGATCTACCAGTCTCACGATC
rJMFF004O10-          GGCATGTTCGTCCCTGAAGGTGACAAAGCCAAATCCCCTGGATCTACCAGTCTCACGATC
rJMSF028M15-          GGCATGTTCGTCCCTGAAGGTGACAAAGCCAAATCCCCTGGATCTACCAGTCTCACGATC
JMFF004O10+           GGCATGTTCGTCCCTGAAGGTGACAAAGCCAAATCCCCTGGATCTACCAGTCTCACGATC
                      ____________________________________________________________
consensus             GGCATGTTCGTCCCTGAAGGTGACAAAGCCAAATCCCCTGGATCTACCAGTCTCACGATC
 
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JMSF028M15+           ATTGATAATCTTCGATTCGAGAATCTCGCCATACTGACCGAAAGCCTCATCAAGGGTTCG
rJMFF004O10-          ATTGATAATCTTCGATTCGAGAATCTCGCCATACTGACCGAAAGCCTCATCAAGGGTTCG
rJMSF028M15-          ATTGATAATCTTCGATTCGAGAATCTCGCCATACTGACCGAAAGCCTCATCAAGGGTTCG
JMFF004O10+           ATTGATAATCTTCGATTCGAGAATCTCGCCATACTGACCGAAAGCCTCATCAAGGGTTCG
                      ____________________________________________________________
consensus             ATTGATAATCTTCGATTCGAGAATCTCGCCATACTGACCGAAAGCCTCATCAAGGGTTCG
 
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JMSF028M15+           TTCGGTGGTGGCCCAGGCCAAGCCACCGACGAAACACCTAAACTCAACATCTGCGGAAGC
rJMFF004O10-          TTCGGTGGTGGCCCAGGCCAAGCCACCGACGAAACACCTAAACTCAACATCTGCGGAAGC
rJMSF028M15-          TTCGGTGGTGGCCCAGGCCAAGCCACCGACGAAACACCTAAACTCAACATCTGCGGAAGC
JMFF004O10+           TTCGGTGGTGGCCCAGGCCAAGCCACCGACGAAACACCTAAACTCAACATCTGCGGAAGC
                      ____________________________________________________________
consensus             TTCGGTGGTGGCCCAGGCCAAGCCACCGACGAAACACCTAAACTCAACATCTGCGGAAGC
 
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JMSF028M15+           CATTTTTATA                                                  
rJMFF004O10-          CATTTTTATA                                                  
rJMSF028M15-          CATTTTTATATAGTCAAAAAAGCTTAACAAACCGAACGTAAC                  
JMFF004O10+           CATTTTTATATAGTCAAAAAAGCTTAACAAACCGAACGTAACAAAGGATAAGAAAGAGGC
                      ____________________________________________________________
consensus             CATTTTTATATAGTCAAAAAAGCTTAACAAACCGAACGTAACAAAGGATAAGAAAGAGGC
 
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JMFF004O10+           AAAAGATTGATGAAGAGAAATTGGGAGAAACGATTGGATTATATAGGCGGAGGTTTCAAG
                      ____________________________________________________________
consensus             AAAAGATTGATGAAGAGAAATTGGGAGAAACGATTGGATTATATAGGCGGAGGTTTCAAG
 
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JMFF004O10+           GTTTAAGGCAGATAAAGTTGCTCAAGAATATCGCTTTTTACCCTTTCTGCCCCAGATTTT
                      ____________________________________________________________
consensus             GTTTAAGGCAGATAAAGTTGCTCAAGAATATCGCTTTTTACCCTTTCTGCCCCAGATTTT