Contig 010129:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF032H01+                     AANNTGGGGGGGGNTGNTTTGNAAAAAAAAAAAAGAAAAAGAAAATTATG
                      ____________________________________________________________
consensus                       AANNTGGGGGGGGNTGNTTTGNAAAAAAAAAAAAGAAAAAGAAAATTATG
 
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JMSF032H01+           AGGTGTTGGGTTGTTGTATGTGTTTGTGTGGATGGATGCATCCTTGATTTCCATCCACAA
                      ____________________________________________________________
consensus             AGGTGTTGGGTTGTTGTATGTGTTTGTGTGGATGGATGCATCCTTGATTTCCATCCACAA
 
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JMSF032H01+           ACAGCCAAAATATTCCACCCTGTGAAGCGGAGCGTTAGGAACACGCTCCACCTCCCAATC
                      ____________________________________________________________
consensus             ACAGCCAAAATATTCCACCCTGTGAAGCGGAGCGTTAGGAACACGCTCCACCTCCCAATC
 
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JMSF032H01+           TCCCATCCTAATTTGTGAATTAATTATTCGAAAAAGAAAAAGGAAAGAAAGAAAGAATGA
                      ____________________________________________________________
consensus             TCCCATCCTAATTTGTGAATTAATTATTCGAAAAAGAAAAAGGAAAGAAAGAAAGAATGA
 
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JMFF002E04+                           CCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
JMSF032H01+           ATTAGGGATTAGACGACCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
rJMFF001L03-                          CCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
                      ____________________________________________________________
consensus             ATTAGGGATTAGACGACCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
 
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JMFF002E04+           ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
JMSF032H01+           ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
rJMFF001L03-          ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
                      ____________________________________________________________
consensus             ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
 
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JMFF002E04+           GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATT      
JMSF032H01+           GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATTGACGAC
rJMFF001L03-          GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATTGACGAC
                      ____________________________________________________________
consensus             GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATTGACGAC
 
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JMSF032H01+           ACTCTCAGCTCAAGAACATCAACCGGAGATGTTGATCCGGGAGGAGGGGATTCATCATAT
rJMFF001L03-          ACTCTCAGCTCAAGAACATCAACCGGAGATGTTGATCCGGGAGGAGGGGATTCATCATAT
                      ____________________________________________________________
consensus             ACTCTCAGCTCAAGAACATCAACCGGAGATGTTGATCCGGGAGGAGGGGATTCATCATAT
 
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JMSF032H01+           CCCCCAGCCCCAGGGGCAGGAAGCTGGTCATCAACAAGTCTTGTCCTCTTTGGCTTTGAG
rJMFF001L03-          CCCCCAGCCCCAGGGGCAGGAAGCTGGTCATCAACAAGTCTTGTCCTCTTTGGCTTTGAG
                      ____________________________________________________________
consensus             CCCCCAGCCCCAGGGGCAGGAAGCTGGTCATCAACAAGTCTTGTCCTCTTTGGCTTTGAG
 
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JMSF032H01+           TTAGAGCTGATTCC                                              
rJMFF001L03-          TTAGAGCTGATTCCTTCTTGATCAAATTCAAATATCCCATTATTATTCTTGGATCTGGCG
                      ____________________________________________________________
consensus             TTAGAGCTGATTCCTTCTTGATCAAATTCAAATATCCCATTATTATTCTTGGATCTGGCG
 
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rJMFF001L03-          CCACCGTTACCCGATTCCAGCTCCCATATTTCTGCTTGAATTATTCGCTCTTGTTCCCTC
                      ____________________________________________________________
consensus             CCACCGTTACCCGATTCCAGCTCCCATATTTCTGCTTGAATTATTCGCTCTTGTTCCCTC
 
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rJMFF001L03-          AATTCTTGGATGTACTCTATTGCGTCTTTGATTATGGAAGCTTTGTCCATCTTGCTAATC
JMFN039A20+                                                             CTTGCTAATC
JMFF001L03+                                                             CTTGCTAATC
                      ____________________________________________________________
consensus             AATTCTTGGATGTACTCTATTGCGTCTTTGATTATGGAAGCTTTGTCCATCTTGCTAATC
 
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rJMFF001L03-          TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
JMFN039A20+           TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
JMFF001L03+           TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
                      ____________________________________________________________
consensus             TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
 
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rJMFF001L03-          TCGGAAACTATGTTCTTGGATGCCG                                   
JMFN039A20+           TCGGAAACTATGTTCTTGGATGCCGCCGATGATTGAGACCCATCCGGCGAGCTCGAATCG
JMFF001L03+           TCGGAAACTATGTTCTTGGATGCCGCCGATGATTGAGACCCATCCGGCGAGCTCGAATCG
                      ____________________________________________________________
consensus             TCGGAAACTATGTTCTTGGATGCCGCCGATGATTGAGACCCATCCGGCGAGCTCGAATCG
 
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JMFN039A20+           TAATACGCCGAAATCGCCTCTTCGAAGTAGCTGTCGAGTTCCTCGGATTGAAGGAAGGTT
JMFF001L03+           TAATACGCCGAAATCGCCTCCTCGAAGTAGCTGTCGAGTTCCTCGGATTGAAGGAAGGTT
                      ____________________________________________________________
consensus             TAATACGCCGAAATCGCCTCTTCGAAGTAGCTGTCGAGTTCCTCGGATTGAAGGAAGGTT
 
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JMFN039A20+           TGAGTTTCCCAGTAGTGTTTGTACTCATCGCCAATGTTTTCCATTATATTGATTTGGAAT
JMFF001L03+           TGAGTTTCCCAGTAGTGTTTGTACTCATCGCCAATGTTTTCCATTATATTGATTTGGAAT
                      ____________________________________________________________
consensus             TGAGTTTCCCAGTAGTGTTTGTACTCATCGCCAATGTTTTCCATTATATTGATTTGGAAT
 
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JMFN039A20+           TTGTAAGCTAGCTAGCTAGCTAGCTAAGTGGTGAAGGTGAAGTGAGAAGGAAGTGGATTA
JMFF001L03+           TTGTAAGCTAGCTAGCTAGCTAGCTAAGTGGTGAAGGTGAAGTGAGAAGGAAGTGGATTA
                      ____________________________________________________________
consensus             TTGTAAGCTAGCTAGCTAGCTAGCTAAGTGGTGAAGGTGAAGTGAGAAGGAAGTGGATTA
 
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JMFN039A20+           TATATATTTGATCTCACTTCAACTC                                   
JMFF001L03+           TATATATTTGATCTCACTTCAACTCTGAGCGATCGATCAAGGCAGGGGAGAATGAACTGG
                      ____________________________________________________________
consensus             TATATATTTGATCTCACTTCAACTCTGAGCGATCGATCAAGGCAGGGGAGAATGAACTGG
 
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JMFF001L03+           GGAAGAGGGGATTATATATATATATATATTCTTTTCTTAGAGGACACACTCAGATCACAC
                      ____________________________________________________________
consensus             GGAAGAGGGGATTATATATATATATATATTCTTTTCTTAGAGGACACACTCAGATCACAC