Contig 010129:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001L03Sequence584010129 (5)ref|XP_009603228.1|5e-53PREDICTED: transcription factor bHLH35-like isoform X2 [Nicotiana tomentosiform792010129 (5)ref|XP_009603227.1|6e-94PREDICTED: transcription factor bHLH35-like isoform X1 [Nicotiana tomentosiform
JMFF002E04Sequence387010129 (5)ref|XP_009603227.1|1e-22PREDICTED: transcription factor bHLH35-like isoform X1 [Nicotiana tomentosiform
JMFN039A20Sequence526010129 (5)ref|XP_009603228.1|9e-30PREDICTED: transcription factor bHLH35-like isoform X2 [Nicotiana tomentosiform
JMSF032H01Sequence546010129 (5)ref|XP_011094110.1|4e-33PREDICTED: transcription factor bHLH35 [Sesamum indicum]548021509

Alignment

This contig is upended


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JMSF032H01+ AANNTGGGGGGGGNTGNTTTGNAAAAAAAAAAAAGAAAAAGAAAATTATG
                      ____________________________________________________________
consensus AANNTGGGGGGGGNTGNTTTGNAAAAAAAAAAAAGAAAAAGAAAATTATG
 
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JMSF032H01+ AGGTGTTGGGTTGTTGTATGTGTTTGTGTGGATGGATGCATCCTTGATTTCCATCCACAA
                      ____________________________________________________________
consensus AGGTGTTGGGTTGTTGTATGTGTTTGTGTGGATGGATGCATCCTTGATTTCCATCCACAA
 
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JMSF032H01+ ACAGCCAAAATATTCCACCCTGTGAAGCGGAGCGTTAGGAACACGCTCCACCTCCCAATC
                      ____________________________________________________________
consensus ACAGCCAAAATATTCCACCCTGTGAAGCGGAGCGTTAGGAACACGCTCCACCTCCCAATC
 
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JMSF032H01+ TCCCATCCTAATTTGTGAATTAATTATTCGAAAAAGAAAAAGGAAAGAAAGAAAGAATGA
                      ____________________________________________________________
consensus TCCCATCCTAATTTGTGAATTAATTATTCGAAAAAGAAAAAGGAAAGAAAGAAAGAATGA
 
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JMFF002E04+ CCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
JMSF032H01+ ATTAGGGATTAGACGACCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
rJMFF001L03- CCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
                      ____________________________________________________________
consensus ATTAGGGATTAGACGACCTCAATAAAAACAGTCTTGAGAAGCCTCCCAGAGAAAGCAGTG
 
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JMFF002E04+ ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
JMSF032H01+ ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
rJMFF001L03- ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
                      ____________________________________________________________
consensus ATGTTTGCACTTATGATTTTGATATCCAAAGACTCAAAAATCTCGCACAGCTTCATCATA
 
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JMFF002E04+ GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATT
JMSF032H01+ GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATTGACGAC
rJMFF001L03- GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATTGACGAC
                      ____________________________________________________________
consensus GTGTCCGTTCTTTTGCTGCATGTCAGGCTCACCACTACTGTTTTCTTCCCCATTGACGAC
 
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JMSF032H01+ ACTCTCAGCTCAAGAACATCAACCGGAGATGTTGATCCGGGAGGAGGGGATTCATCATAT
rJMFF001L03- ACTCTCAGCTCAAGAACATCAACCGGAGATGTTGATCCGGGAGGAGGGGATTCATCATAT
                      ____________________________________________________________
consensus ACTCTCAGCTCAAGAACATCAACCGGAGATGTTGATCCGGGAGGAGGGGATTCATCATAT
 
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JMSF032H01+ CCCCCAGCCCCAGGGGCAGGAAGCTGGTCATCAACAAGTCTTGTCCTCTTTGGCTTTGAG
rJMFF001L03- CCCCCAGCCCCAGGGGCAGGAAGCTGGTCATCAACAAGTCTTGTCCTCTTTGGCTTTGAG
                      ____________________________________________________________
consensus CCCCCAGCCCCAGGGGCAGGAAGCTGGTCATCAACAAGTCTTGTCCTCTTTGGCTTTGAG
 
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JMSF032H01+ TTAGAGCTGATTCC
rJMFF001L03- TTAGAGCTGATTCCTTCTTGATCAAATTCAAATATCCCATTATTATTCTTGGATCTGGCG
                      ____________________________________________________________
consensus TTAGAGCTGATTCCTTCTTGATCAAATTCAAATATCCCATTATTATTCTTGGATCTGGCG
 
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rJMFF001L03- CCACCGTTACCCGATTCCAGCTCCCATATTTCTGCTTGAATTATTCGCTCTTGTTCCCTC
                      ____________________________________________________________
consensus CCACCGTTACCCGATTCCAGCTCCCATATTTCTGCTTGAATTATTCGCTCTTGTTCCCTC
 
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rJMFF001L03- AATTCTTGGATGTACTCTATTGCGTCTTTGATTATGGAAGCTTTGTCCATCTTGCTAATC
JMFN039A20+ CTTGCTAATC
JMFF001L03+ CTTGCTAATC
                      ____________________________________________________________
consensus AATTCTTGGATGTACTCTATTGCGTCTTTGATTATGGAAGCTTTGTCCATCTTGCTAATC
 
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rJMFF001L03- TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
JMFN039A20+ TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
JMFF001L03+ TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
                      ____________________________________________________________
consensus TTGGGAACCACTGCCCTGAGTGCAAACAGTCTCTCGTTGAGCTTCTTCCTCCTATTCCTC
 
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rJMFF001L03- TCGGAAACTATGTTCTTGGATGCCG
JMFN039A20+ TCGGAAACTATGTTCTTGGATGCCGCCGATGATTGAGACCCATCCGGCGAGCTCGAATCG
JMFF001L03+ TCGGAAACTATGTTCTTGGATGCCGCCGATGATTGAGACCCATCCGGCGAGCTCGAATCG
                      ____________________________________________________________
consensus TCGGAAACTATGTTCTTGGATGCCGCCGATGATTGAGACCCATCCGGCGAGCTCGAATCG
 
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JMFN039A20+ TAATACGCCGAAATCGCCTCTTCGAAGTAGCTGTCGAGTTCCTCGGATTGAAGGAAGGTT
JMFF001L03+ TAATACGCCGAAATCGCCTCCTCGAAGTAGCTGTCGAGTTCCTCGGATTGAAGGAAGGTT
                      ____________________________________________________________
consensus TAATACGCCGAAATCGCCTCTTCGAAGTAGCTGTCGAGTTCCTCGGATTGAAGGAAGGTT
 
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JMFN039A20+ TGAGTTTCCCAGTAGTGTTTGTACTCATCGCCAATGTTTTCCATTATATTGATTTGGAAT
JMFF001L03+ TGAGTTTCCCAGTAGTGTTTGTACTCATCGCCAATGTTTTCCATTATATTGATTTGGAAT
                      ____________________________________________________________
consensus TGAGTTTCCCAGTAGTGTTTGTACTCATCGCCAATGTTTTCCATTATATTGATTTGGAAT
 
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JMFN039A20+ TTGTAAGCTAGCTAGCTAGCTAGCTAAGTGGTGAAGGTGAAGTGAGAAGGAAGTGGATTA
JMFF001L03+ TTGTAAGCTAGCTAGCTAGCTAGCTAAGTGGTGAAGGTGAAGTGAGAAGGAAGTGGATTA
                      ____________________________________________________________
consensus TTGTAAGCTAGCTAGCTAGCTAGCTAAGTGGTGAAGGTGAAGTGAGAAGGAAGTGGATTA
 
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JMFN039A20+ TATATATTTGATCTCACTTCAACTC
JMFF001L03+ TATATATTTGATCTCACTTCAACTCTGAGCGATCGATCAAGGCAGGGGAGAATGAACTGG
                      ____________________________________________________________
consensus TATATATTTGATCTCACTTCAACTCTGAGCGATCGATCAAGGCAGGGGAGAATGAACTGG
 
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JMFF001L03+ GGAAGAGGGGATTATATATATATATATATTCTTTTCTTAGAGGACACACTCAGATCACAC
                      ____________________________________________________________
consensus GGAAGAGGGGATTATATATATATATATATTCTTTTCTTAGAGGACACACTCAGATCACAC