Contig 010128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K04Sequence536010128 (7)ref|XP_009766349.1|2e-15PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico756013593 (7)ref|XP_009766349.1|6e-111PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico
JMFF002I19Sequence619010128 (7)ref|XP_009766349.1|4e-46PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico785013593 (7)ref|XP_009766349.1|7e-96PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico
JMFF006F13Sequence524010128 (7)ref|XP_009766349.1|1e-56PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico742013593 (7)gb|EYU33796.1|2e-64hypothetical protein MIMGU_mgv1a006939mg [Erythranthe guttata]
JMFS044H05Sequence627010128 (7)ref|XP_009766349.1|4e-46PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico
JMSF008A10Sequence232010128 (7)789013593 (7)ref|XP_009766349.1|4e-103PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico
JMSF012P20Sequence273010128 (7)756013593 (7)ref|XP_009766349.1|5e-117PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico
JMSF026B02Sequence653010128 (7)ref|XP_009766349.1|2e-51PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico784013593 (7)ref|XP_009766349.1|3e-101PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [Nico

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006F13+ ATTTCCAGAGTAGACTCATCCAAGACCCTAATGGTTCCTTTGAAGAC
JMFS044H05+ GTAGACTCATCCAAGACCCTAATGG-TCCTTTGAAGAC
JMSF026B02+ GTAGACTCATCCAAGACCCTAATGGTTCCTTTGAAGAC
JMFF002I19+ CTTTGAAGAC
                      ____________________________________________________________
consensus ATTTCCAGAGTAGACTCATCCAAGACCCTAATGGTTCCTTTGAAGAC
 
. : . : . : . : . : . :
JMFF006F13+ ACCATGAGTGGAGTCATACTTGAACATGTATGCCATGTAATTAGCATCAATAAAAGGGTC
JMFS044H05+ ACCATGAGTGGAGTCATACTTGAACATGTATGCCATGTAATTAGCATCAATAAAAGGGTC
JMSF026B02+ ACCATGAGTGGAGTCATACTTGAACATGTATGCCATGTAATTAGCATCAATAAAAGGGTC
JMFF002I19+ ACCATGAGTGGAGTCATACTTGAACATGTATGCCATGTAATTAGCATCAATAAAAGGGTC
                      ____________________________________________________________
consensus ACCATGAGTGGAGTCATACTTGAACATGTATGCCATGTAATTAGCATCAATAAAAGGGTC
 
. : . : . : . : . : . :
JMFF006F13+ ATTAACTGCAACCACATCAATGTCATCCCTTGACGTTGCAATTNGTAAAACTAACCTTCC
JMFS044H05+ ATTAACTGCAACCACATCAATGTCATCCCTTGACGTTGCAATTCGTAAAACTAACCTTCC
JMSF026B02+ ATTAACTGCAACCACATCAATGTCATCCCTTGACGTTGCAATTCGTAAAACTAACCTTCC
JMFF002I19+ ATTAACTGCAACCACATCAATGTCATCCCTTGACGTTGCAATTCGTAAAACTAACCTTCC
                      ____________________________________________________________
consensus ATTAACTGCAACCACATCAATGTCATCCCTTGACGTTGCAATTCGTAAAACTAACCTTCC
 
. : . : . : . : . : . :
JMFF006F13+ AATCCTTCCAAACCCATTGATCCCAACCCTTGTNTTCCCAGTAGTTTGTGATTTTGGAAT
JMFS044H05+ AATCCTTCCAAACCCATTGATCCCAACCCTTGTCTTCCCAGTAGTTTGTGATTTTGGAAT
JMSF026B02+ AATCCTTCCAAACCCATTGATCCCAACCCTTGTCTTCCCAGTAGTTTGTGATTTTGGAAT
JMFF002I19+ AATCCTTCCAAACCCATTGATCCCAACCCTTGTCTTCCCAGTAGTTTGTGATTTTGGAAT
JMFF001K04+ CTTCCAAACCCATTGATCCCAACCCTTGTCTTCCCAGTAGTTTGTGATTTTGGAAT
                      ____________________________________________________________
consensus AATCCTTCCAAACCCATTGATCCCAACCCTTGTCTTCCCAGTAGTTTGTGATTTTGGAAT
 
. : . : . : . : . : . :
JMFF006F13+ TGTTGGAGGTAGTTCGGTGGCTGTAGCTTTAACAGGTTGAATACTGCTGGAACCAGATCC
JMFS044H05+ TGTTGGAGGTAGTTCGGTGGCTGTAGCTTTAACAGGTTGAATACTGCTGGAACCAGATCC
JMSF026B02+ TGTTGGAGGTAGTTCGGTGGCTGTAGCTTTAACAGGTTGAATACTGCTGGAACCAGATCC
JMFF002I19+ TGTTGGAGGTAGTTCGGTGGCTGTAGCTTTAACAGGTTGAATACTGCTGGAACCAGATCC
JMFF001K04+ TGTTGGAGGTAGTTCGGTGGCTGTAGCTTTAACAGGTTGAATACTGCTGGAACCAGATCC
                      ____________________________________________________________
consensus TGTTGGAGGTAGTTCGGTGGCTGTAGCTTTAACAGGTTGAATACTGCTGGAACCAGATCC
 
. : . : . : . : . : . :
JMFF006F13+ TTGTACGGAAGATGAATGAACATTTGGAAGAGCGGAACCAAAGATGCTTGATTCAAACTT
JMFS044H05+ TTGTACGGAAGATGAATGAACATTTGGAAGAGCGGAACCAAAGATGCTTGATTCAAACTT
JMSF026B02+ TTGTACGGAAGATGAATGAACATTTGGAAGAGCGGAACCAAAGATGCTTGATTCAAACTT
JMFF002I19+ TTGTACGGAAGATGAATGAACATTTGGAAGAGCGGAACCAAAGATGCTTGATTCAAACTT
JMFF001K04+ TTGTACGGAAGATGAATGAACATTTGGAAGAGCGGAACCAAAGATGCTTGATTCAAACTT
                      ____________________________________________________________
consensus TTGTACGGAAGATGAATGAACATTTGGAAGAGCGGAACCAAAGATGCTTGATTCAAACTT
 
. : . : . : . : . : . :
JMFF006F13+ GACGGAGGTGCAGCCTTGATTGAAGCCAGCCAATGATGCCTGATGGCGATGGGAAGATGA
JMFS044H05+ GACGGAGGTGCAGCCTTGATTGAAGCCAGCCAATGATGCCTGATGGCGATGGGAAGATGA
JMSF026B02+ GACGGAGGTGCAGCCTTGATTGAAGCCAGCCAATGATGCCTGATGGCGATGGGAAGATGA
JMFF002I19+ GACGGAGGTGCAGCCTTGATTGAAGCCAGCCAATGATGCCTGATGGCGATGGGAAGATGA
JMSF012P20+ GCCTGATGGCGATGGGAAGATGA
JMFF001K04+ GACGGAGGTGCAGCCTTGATTGAAGCCAGCCAATGATGCCTGATGGCGATGGGAAGATGA
                      ____________________________________________________________
consensus GACGGAGGTGCAGCCTTGATTGAAGCCAGCCAATGATGCCTGATGGCGATGGGAAGATGA
 
. : . : . : . : . : . :
JMFF006F13+ ATAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
JMFS044H05+ AGAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
JMSF026B02+ AGAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
JMFF002I19+ AGAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
JMSF012P20+ AGAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
JMSF008A10+ GGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
JMFF001K04+ AGAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
                      ____________________________________________________________
consensus AGAAGCGTGTAGAACAGGGGAAGCAGGCACAGATCTGAGGAGAGAAGAGAATCCCATTTT
 
. : . : . : . : . : . :
JMFF006F13+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCC
JMFS044H05+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
JMSF026B02+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
JMFF002I19+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
JMSF012P20+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
JMSF008A10+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
JMFF001K04+ TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
                      ____________________________________________________________
consensus TACTATTGCTTGCAAAAACAGTATGACCTCCTCCGCTCAATGATGAGTATCCAATCCAAA
 
. : . : . : . : . : . :
JMFS044H05+ TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
JMSF026B02+ TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
JMFF002I19+ TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
JMSF012P20+ TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
JMSF008A10+ TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
JMFF001K04+ TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
                      ____________________________________________________________
consensus TAGATCGATGAACGAGAGATATATATATATGCAAAACCCTAGGAAGATGAGGAAAGGTGG
 
. : . : . : . : . : . :
JMFS044H05+ TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGA
JMSF026B02+ TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGAGGAGACTCTG
JMFF002I19+ TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGAGGAGACTCTG
JMSF012P20+ TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGAGGAGACTCTG
JMSF008A10+ TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGAGGAGACTCTG
JMFF001K04+ TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGAGGAGACTCTG
                      ____________________________________________________________
consensus TTTGAGATTCTATGTAAAAATTAAAATGGCTCTTGAGATACAGAGGAGGAGGAGACTCTG
 
. : . : . : . : . : . :
JMSF026B02+ GCAGGCTG
JMFF002I19+ GCAGGCTGC
JMSF012P20+ GCAGGCTGC
JMSF008A10+ GCAGGCTGC
JMFF001K04+ GCAGGCTGCAGGCAGGCACACCGTCCTTCCCTGCTTTTTAAATTGCGTAAATTGAGCGCT
                      ____________________________________________________________
consensus GCAGGCTGCAGGCAGGCACACCGTCCTTCCCTGCTTTTTAAATTGCGTAAATTGAGCGCT