Contig 010125:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMCP016B11+                                                             GCTTTATTA
                      ____________________________________________________________
consensus                                                                GCTTTATTA
 
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rJMCP016B11+          AAACATACaAATGATGAACGTTGTAACATGATATCCATATCATATGGgttgtcCGCCATA
rJMCP015F10+                       ATGAACGTTGTAACATGATATCCATATCATATGGCAACAGCGCCATA
                      ____________________________________________________________
consensus             AAACATACTAATGATGAACGTTGTAACATGATATCCATATCATATGGCAACAGCGCCATA
 
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rJMCP016B11+          TATCACAGTAAATttTTtttTTCACACACtcCCATAATACAATACATGCATGACATATAT
rJMCP015F10+          TATCACAGTAAATAATTAAATTCACACACAGCCATAATACAATACATGCATGACATATAT
                      ____________________________________________________________
consensus             TATCACAGTAAATAATTAAATTCACACACAGCCATAATACAATACATGCATGACATATAT
 
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rJMCP016B11+          TATAACATATTTATAGATattTTGGAATATattTTAAGTAGTCCATCATATCATGATtaG
rJMCP015F10+          TATAACATATTTATAGATTAATTGGAATATTAATTAAGTAGTCCATCATATCATGATATG
                      ____________________________________________________________
consensus             TATAACATATTTATAGATTAATTGGAATATTAATTAAGTAGTCCATCATATCATGATATG
 
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rJMCP016B11+          TATATATATTATATCCTCTCTTTTTTTGAGAGAtaATATATATATCATATCCattTGATA
rJMCP015F10+          TATATATATTATATCCTCTCTTTTTTTGAGAGAATATATATATATCATATCCTAATGATA
                      ____________________________________________________________
consensus             TATATATATTATATCCTCTCTTTTTTTGAGAGAATATATATATATCATATCCTAATGATA
 
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rJMCP016B11+          TGATTGTGCCTCTTGGATGGACCAcAAGGAGGAGTGATGACTCCTTTGGGgtcTTTTTGG
rJMCP015F10+          TGATTGTGCCTCTTGGATGGACCAGAAGGAGGAGTGATGACTCCTTTGGGCAGTTTTTGG
                      ____________________________________________________________
consensus             TGATTGTGCCTCTTGGATGGACCAGAAGGAGGAGTGATGACTCCTTTGGGCAGTTTTTGG
 
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rJMCP016B11+          AACAggtacgCGAgAattTTAcCTTCACTC                              
rJMCP015F10+          AACACCATGCCGACATAATTAGCTTCACTCTTTGGCTTCACCGGCGGCAATAACATTGTT
                      ____________________________________________________________
consensus             AACACCATGCCGACATAATTAGCTTCACTCTTTGGCTTCACCGGCGGCAATAACATTGTT
 
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rJMCP015F10+          GCAGAATTAGCATGCTTTAAGGGATCATTATTGTTTGGTTTCAGGTGGGATGAGAGCATA
                      ____________________________________________________________
consensus             GCAGAATTAGCATGCTTTAAGGGATCATTATTGTTTGGTTTCAGGTGGGATGAGAGCATA
 
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rJMCP015F10+          GAATAATTGCCTTCcagaaggaaggtatcatccggaacggGCCATGGTTGAGTTAAGAAG
                      ____________________________________________________________
consensus             GAATAATTGCCTTCGTCTTCCTTCCATAGTAGGCCTTGCCGCCATGGTTGAGTTAAGAAG
 
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rJMCP015F10+          AAGAAGCTGGGAAATGAGCAGAAATGCTCCAATGATAAGCCATGGAGAGCGAATGGTCTT
                      ____________________________________________________________
consensus             AAGAAGCTGGGAAATGAGCAGAAATGCTCCAATGATAAGCCATGGAGAGCGAATGGTCTT
 
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rJMCP015F10+          TGAGGGAGAAGAAGAAGAAGAAGAAGAGGCGGCCATGGTGTATATATGGTTTAATTTTGA
                      ____________________________________________________________
consensus             TGAGGGAGAAGAAGAAGAAGAAGAAGAGGCGGCCATGGTGTATATATGGTTTAATTTTGA