Contig 010124:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP011A08+                           GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
rJMCP004H03+                           GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
rJMCP011D05+                           GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
                      ____________________________________________________________
consensus                              GACAATATGTCTGTGGTCGTGGTCGTTCTTTTATGCTAGGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP011A08+          TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
rJMCP004H03+          TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
rJMCP012H09+           aaacatCCCAAGagaacgttcgaTATgacattggtccacAGcaatcacTCTaagattac
rJMCP011D05+          TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
                      ____________________________________________________________
consensus             TTTTGTACCCAAGTCTTGCAAGCTTATCTGTAACCAGGTGAGGTTAGTGTCTTTCTACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP011A08+          GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
rJMCP004H03+          GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
rJMCP012H09+          acttaGGtatagtgACCgaaGAaact-caacGAGAACTTGtaaTact-ccactggggcta
rJMCP011D05+          GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
                      ____________________________________________________________
consensus             GTAATGGATATCACACCCTTGATTGATGTTGGAGAACTTGATTTTGATGGTGATGATGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP011A08+          GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
rJMCP004H03+          GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
rJMCP012H09+          ctcaACCTaga-ctcgtactaTagggagaaaaacctAtCTTTCCCCCagaagacaaacat
rJMCP011D05+          GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
                      ____________________________________________________________
consensus             GAGTACCTTCTCGAGCATGATTTCCCTCTTTTTGGAAACTTTCCCCCTCTTCCGTTTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP011A08+          GTTGACTCACC                                                 
rJMCP004H03+          GTTGACTCACCAACACCTAAGCCCGAACCGAAAAAGAGGAAAAAGTGCAAGGCCTCATAC
rJMCP012H09+          GaactgTCAggAAgtggatAGCCCGAACCGAAAAAGAGGAAAAAcTGCAAGGCCTCATAg
rJMCP011D05+          GTTGACTCACCAACACCTAAGCCCGAACCGAAAAAGAGGAAAAAGTGCAAGGCCTCATAC
                      ____________________________________________________________
consensus             GTTGACTCACCAACACCTAAGCCCGAACCGAAAAAGAGGAAAAAGTGCAAGGCCTCATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP004H03+          TCTTCTCTTGATAGCTCCCTCGTCCGGTCCACGCGGCCTCAACTAGGGTCACAGGATTGG
rJMCP012H09+          agTTCTCTacAatcgaCCgagcTCCGGTCCACGCGGCCTgttgatGGGTCACAcct-acc
rJMCP011D05+          TCTTCTCTTGATAGCTCCCTCGTCCGGTCCACGCGGCCTCAACTAGGGTCACAGGATTGG
                      ____________________________________________________________
consensus             TCTTCTCTTGATAGCTCCCTCGTCCGGTCCACGCGGCCTCAACTAGGGTCACAGGATTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP004H03+          GAGGATATTAAAGGTCTACTTAGTCTTGGCGTagaGACTTACCCTCCTAAACTTGAGGAT
rJMCP012H09+          GAGGATATTAAAGGagaACaatcaggccgcgaggggggggggggTggatttgaactGGAT
rJMCP011D05+          GAGGATATTAAAGGTCTACTTAGTCTTGGCGTTCTGACTTACCCTCCTAAACTTGAGGAT
                      ____________________________________________________________
consensus             GAGGATATTAAAGGTCTACTTAGTCTTGGCGTTCTGACTTACCCTCCTAAACTTGAGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP004H03+          AATAagagaGACCCACTCCTCGATAAATATTTTGGGGTCTACCTTCTGTCGCTACAGGTT
rJMCP012H09+          AAatagagacACCCtgTCCTCGATAAATAT                              
rJMCP011D05+          AATATCTCTGACCCACTCCTCGATAAATATTTTGGGGTCTACCTTCTGTCGCTACAGGTT
                      ____________________________________________________________
consensus             AATATCTCTGACCCACTCCTCGATAAATATTTTGGGGTCTACCTTCTGTCGCTACAGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP004H03+          GGGTTGCAGTTTCCCCTTCATAGGTTTGTGATAGACTTTATGAACTTCTACGAGATAGCC
rJMCP011D05+          GGGTTGCAGTTTCCCCTTCATAGGTTTGTGATAGACTTTATGAACTTCTACGAGATAGCC
                      ____________________________________________________________
consensus             GGGTTGCAGTTTCCCCTTCATAGGTTTGTGATAGACTTTATGAACTTCTACGAGATAGCC