Contig 010122:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS055B08+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFS055B08+           GTGATATTTATCTTCTAGAATATATCACATCTTAAACAACAAAAAAGTCCATCACTGGAA
                      ____________________________________________________________
consensus             GTGATATTTATCTTCTAGAATATATCACATCTTAAACAACAAAAAAGTCCATCACTGGAA
 
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JMFS055B08+           CTATAATAGAACCCAAATACATGGTGTGTGAATGCATAATAGTATTTGTGTCCAAATTCT
                      ____________________________________________________________
consensus             CTATAATAGAACCCAAATACATGGTGTGTGAATGCATAATAGTATTTGTGTCCAAATTCT
 
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JMFS055B08+           GACCAGTAGATGTTTACATATATGTCTGTTTCTTGATGGACAAGCGCATGCGCATGCCGT
                      ____________________________________________________________
consensus             GACCAGTAGATGTTTACATATATGTCTGTTTCTTGATGGACAAGCGCATGCGCATGCCGT
 
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JMFS055B08+           TGACCGTATATACATATGGACTTCCAGGTAGTTTTTTGTTGCTGGCAGCTTCAGAATGAT
rJMCP002D06+                                                    TGGCAGCTTgActATGAT
                      ____________________________________________________________
consensus             TGACCGTATATACATATGGACTTCCAGGTAGTTTTTTGTTGCTGGCAGCTTCAGAATGAT
 
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JMFS055B08+           CCAAAAGTATTCTCTCCACTGTAAGTCATGTAGAGGAAGCCATCCTCGTCCTTGTGTTCC
rJMCP002D06+          CCAAAAGTATTCTCTCCACTGTAAGTCATGTAGAGGAtcgCATCCTCGTCCTTGTGTTCC
                      ____________________________________________________________
consensus             CCAAAAGTATTCTCTCCACTGTAAGTCATGTAGAGGAAGCCATCCTCGTCCTTGTGTTCC
 
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JMFS055B08+           TCATAAATTGCAGACATCATAGCAGCAGTGGGAGGTAGGATGTTCTTGACAAAAATAAAA
rJMCP002D06+          TCATAAATTGCAGACATCATAGCAGCAGTGGGAGGTAGGATGTTCTTGACAAAAATAAAA
                      ____________________________________________________________
consensus             TCATAAATTGCAGACATCATAGCAGCAGTGGGAGGTAGGATGTTCTTGACAAAAATAAAA
 
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JMFS055B08+           ATGGCCTTCTCTGCACTGAGCTTTATCCTCTTTCGGACAACATAAACAAATTGCCCGACA
rJMCP002D06+          ATGGCCTTCTCTGCACTGAGCTTTATCCTCTTTCGGACAACATAAACAAATTGCCCGACA
                      ____________________________________________________________
consensus             ATGGCCTTCTCTGCACTGAGCTTTATCCTCTTTCGGACAACATAAACAAATTGCCCGACA
 
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JMFS055B08+           GTCAGATCAGCAGGAACCAGATACTTTTTCTTGTCAATGTCAGGGATGTCACTCCTTTCG
rJMCP002D06+          GTCAGATCAGCAGGAACCAGATACTTTTTCTTGTCAATGTCAGGGATGTCACTCCTTTCG
                      ____________________________________________________________
consensus             GTCAGATCAGCAGGAACCAGATACTTTTTCTTGTCAATGTCAGGGATGTCACTCCTTTCG
 
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JMFS055B08+           GCCTTCTCCACAATGACTGGAATTCTATCATGGTACTTCTCTCTGATACGAGCAGCTTCT
rJMCP002D06+          GCCTTCTCCACAATGACTGGAATTCTATCATGGTACTTCTCTCTGATACGAGCAGCTTCT
                      ____________________________________________________________
consensus             GCCTTCTCCACAATGACTGGAATTCTATCATGGTACTTCTCTCTGATACGAGCAGCTTCT
 
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JMFS055B08+           GCCTGTCGCCTTTCAAGGGGGTGTTCCAACTTGAA                         
rJMCP002D06+          GCCTGTCGCCTTTCAAGGGGGTGTTCCAACTTGAAGGAGCTCTTTGTCATGGCGATCAGT
                      ____________________________________________________________
consensus             GCCTGTCGCCTTTCAAGGGGGTGTTCCAACTTGAAGGAGCTCTTTGTCATGGCGATCAGT
 
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rJMCP002D06+          GGATGATTTCGAAAACTGCAAAGATTGAAGAAGAATTAGGGTTTCTTCAGTGAGAATAAA
                      ____________________________________________________________
consensus             GGATGATTTCGAAAACTGCAAAGATTGAAGAAGAATTAGGGTTTCTTCAGTGAGAATAAA
 
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rJMCP002D06+          AATAAAAGGAAATGGGAAGAATACTGAGGATAGTAACGAAGAAGACTGAGGGAGTAAGGG
                      ____________________________________________________________
consensus             AATAAAAGGAAATGGGAAGAATACTGAGGATAGTAACGAAGAAGACTGAGGGAGTAAGGG