Contig 010118:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP003B11Sequence204010118 (3)
JMCP003H01Sequence224010118 (3)620002570 (7)ref|XP_011081971.1|2e-69PREDICTED: patatin-like protein 1 [Sesamum indicum]
JMCP013C08Sequence162010118 (3)

Alignment

This contig is upended


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rJMCP013C08+                          CTGGAAACAATTGTAGGGCttggttaTCATTTATTTATGATAAA
JMCP003B11+                                          GGGCAACCAATTCATTTATTTATGATAAA
JMCP003H01+                           CTGGAAACAATTGTAGGGCAACCAATTCATTTATTTATGATAAA
                      ____________________________________________________________
consensus                             CTGGAAACAATTGTAGGGCAACCAATTCATTTATTTATGATAAA
 
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rJMCP013C08+          GATATTGCAGAGAAGTAAGTcattcgccgtgaaCATGACTGCATGCATTATTACAGATTG
JMCP003B11+           GATATTGCAGAGAAGTAAGTGTAAGTGGTACTTCATGACTGCATGCATTATTACAGATTG
JMCP003H01+           GATATTGCAGAGAAGTAAGTGTAAGTGGTACTTCATGACTGCATGCATTATTACAGATTG
                      ____________________________________________________________
consensus             GATATTGCAGAGAAGTAAGTGTAAGTGGTACTTCATGACTGCATGCATTATTACAGATTG
 
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rJMCP013C08+          gCAATTCGATCATATTCATATGCATGatgGGAGTGGGTATATAGacgaGAGGCTTAAG  
JMCP003B11+           CCAATTCGATCATATTCATATGCATGTACGGAGTGGGTATATAGTGCTGAGGCTTAAGGC
JMCP003H01+           CCAATTCGATCATATTCATATGCATGTACGGAGTGGGTATATAGTGCTGAGGCTTAAGGC
                      ____________________________________________________________
consensus             CCAATTCGATCATATTCATATGCATGTACGGAGTGGGTATATAGTGCTGAGGCTTAAGGC
 
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JMCP003B11+           TTTGTTGCATCCACGCTCTCCCCCTTGTATGAGCAGCCGTTCTTGCAATCTCCA      
JMCP003H01+           TTTGTTGCATCCACGCTCTCCCCCTTGTATGAGCAGCCGTTCTTGCAATCTCCACCCGGC
                      ____________________________________________________________
consensus             TTTGTTGCATCCACGCTCTCCCCCTTGTATGAGCAGCCGTTCTTGCAATCTCCACCCGGC