Contig 010109:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032J21Sequence633010109 (6)ref|XP_010325349.1|9e-46PREDICTED: protein ABIL2-like isoform X2 [Solanum lycopersicum]628010109 (6)ref|XP_009629169.1|2e-07PREDICTED: protein ABIL2-like isoform X1 [Nicotiana tomentosiformis] ref|XP_0096
JMSF038F17Sequence670010109 (6)ref|XP_010325349.1|3e-55PREDICTED: protein ABIL2-like isoform X2 [Solanum lycopersicum]960010109 (6)ref|XP_009629169.1|4e-67PREDICTED: protein ABIL2-like isoform X1 [Nicotiana tomentosiformis] ref|XP_0096
JMSF051K15Sequence635010109 (6)ref|XP_010325349.1|1e-53PREDICTED: protein ABIL2-like isoform X2 [Solanum lycopersicum]777010109 (6)ref|XP_009629169.1|6e-21PREDICTED: protein ABIL2-like isoform X1 [Nicotiana tomentosiformis] ref|XP_0096

Alignment

This contig is upended


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JMSF051K15-                                                       GAAGCTTTACCCTCTT
JMSF032J21-                                                       GAAGCTTTACCCTCTT
JMSF038F17-                                                       GAAGCTTTACCCTCTT
                      ____________________________________________________________
consensus                                                         GAAGCTTTACCCTCTT
 
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JMSF051K15-           CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
JMSF032J21-           CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
JMSF038F17-           CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
rJMSF038F17+                                                          CTGAATTAGNTC
                      ____________________________________________________________
consensus             CCATTTTCACCAAAAATCAGGTTTGAGACTACTCCAACTTCATGGGGACTGAATTAGCTC
 
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JMSF051K15-           ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
JMSF032J21-           ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCA--ACAGAACAAACATTACTGACA
JMSF038F17-           ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
rJMSF038F17+          ATCANGAAAGNAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
                      ____________________________________________________________
consensus             ATCAAGAAAGAAACAACTATGATGAAATCCTTATGCAACACAGAACAAACATTACTGACA
 
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JMSF051K15-           GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
JMSF032J21-           GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
JMSF038F17-           GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
rJMSF038F17+          GNTTGAAGGATTTGAAGAATNTGAGGAAACAGTTTTACTCGGNTGCAGAATATTTTGAAG
                      ____________________________________________________________
consensus             GTTTGAAGGATTTGAAGAATCTGAGGAAACAGTTTTACTCGGCTGCAGAATATTTTGAAG
 
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JMSF051K15-           TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
JMSF032J21-           TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
JMSF038F17-           TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
rJMSF038F17+          TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
                      ____________________________________________________________
consensus             TGTCTTATGGCAAAGATGAGCACAAACAAGAATTGGTGGATACCATGAAAGTTTATGTGA
 
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JMSF051K15-           GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
JMSF032J21-           GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
JMSF038F17-           GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
rJMSF038F17+          GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
                      ____________________________________________________________
consensus             GCAAAGCTGTGATTAACACAGTGGATCACCTTGGTTCTATAGCTGCTAAACTTGACACTT
 
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JMSF051K15-           TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
JMSF032J21-           TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
JMSF038F17-           TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
rJMSF038F17+          TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
rJMSF051K15+            TTGGATGAAAAAGTTGGTGAA-TTTNTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
                      ____________________________________________________________
consensus             TCTTGGATGAAAAAGTTGGTGAATTTTCTGCAACAGAACTTCGATTCTCTTGCGTTGAAC
 
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JMSF051K15-           AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
JMSF032J21-           AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
JMSF038F17-           AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
rJMSF038F17+          AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
rJMSF051K15+          AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
                      ____________________________________________________________
consensus             AGAGATCAAGATCATGCCAAGAATTCATCGACCGAAATGGCATTGAACAACAATCATTTG
 
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JMSF051K15-           TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
JMSF032J21-           TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
JMSF038F17-           TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
rJMSF038F17+          TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
rJMSF032J21+                                      TTGTATCAATCCAGGTTCAGATGTGGATACAG
rJMSF051K15+          TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
                      ____________________________________________________________
consensus             TCACTGTTTTGCCCAAGTACCTGAAACATTGTATCAATCCAGGTTCAGATGTGGATACAG
 
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JMSF051K15-           TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
JMSF032J21-           TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
JMSF038F17-           TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
rJMSF038F17+          TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
rJMSF032J21+          TGTCTGATTTAGGNAANTCANACNGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
rJMSF051K15+          TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
                      ____________________________________________________________
consensus             TGTCTGATTTAGGAAAATCAAACAGGAGAAGTCCTATGATGACAATTCTCTATCCTGGCC
 
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JMSF051K15-           GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
JMSF032J21-           GGGACGAAATGCATCANAACCAGCACCACCAACTCCAGCAAGGNTTTCTAGCAACAAAAA
JMSF038F17-           GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
rJMSF038F17+          GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
rJMSF032J21+          GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
rJMSF051K15+          GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
                      ____________________________________________________________
consensus             GGGACGAAATGCATCAAAACCAGCACCACCAACTCCAGCAAGGTTTTCTAGCAACAAAAA
 
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JMSF051K15-           CAAAAGAGCATCCTACCTT                                         
JMSF032J21-           CAAAAGAGCATCCTACCTT                                         
JMSF038F17-           CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTA      
rJMSF038F17+          CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
rJMSF032J21+          CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
rJMSF051K15+          CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
                      ____________________________________________________________
consensus             CAAAAGAGCATCCTACCTTACCAAGGAGAAGGCTGCAGAATAACCTTACATTTACACAAA
 
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rJMSF038F17+          CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
rJMSF032J21+          CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
rJMSF051K15+          CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
                      ____________________________________________________________
consensus             CTTCTCCAAATCCTCCTGCATTCACATTTACCCGGGCTGCATCTAGCAAAGAATTAGATT
 
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rJMSF038F17+          CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGACTCAAGCGCTCTGAATCATACA
rJMSF032J21+          CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGANTCAAGCGCTCTGAATCATACA
rJMSF051K15+          CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGACTCAAGCGCTCTGAATCATACA
                      ____________________________________________________________
consensus             CCAGAGGGAAGCTGTCTGTTTCGCCACTTCGGTTTCGACTCAAGCGCTCTGAATCATACA
 
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rJMSF038F17+          TTCACAGATCACCCCCTTTCAGTCCCTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
rJMSF032J21+          TTCACAGATCACCCCCTTTCAGTCCNTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
rJMSF051K15+          TTCACAGATCACCCCCTTTCAGTCCCTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
                      ____________________________________________________________
consensus             TTCACAGATCACCCCCTTTCAGTCCCTGCGATCTACGACAGTTTCGGCCCCAGCCGCAGA
 
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rJMSF038F17+          GGACAATTTCACTGCCCACAAAGCCTGCAAAACCTACTTCACAGAATATGAAGAAACTGC
rJMSF032J21+          GGACAATTTCACTGCCCACAAAGCCTGCAAAACNTACTTCACAGAATATGAAGAAACTGC
rJMSF051K15+          GGACAATTTCACTGCCCACAAAGCCTGCAAAACCTACTTCACAGAATATGAAGAAACTGC
                      ____________________________________________________________
consensus             GGACAATTTCACTGCCCACAAAGCCTGCAAAACCTACTTCACAGAATATGAAGAAACTGC
 
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rJMSF038F17+          AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
rJMSF032J21+          AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
rJMSF051K15+          AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
                      ____________________________________________________________
consensus             AGTCCAACAAGACTAAACGTACACTCCAATCACTGCTTAGCTTTCAATTCACGGATTAAG
 
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rJMSF038F17+          AAGCTAAGGATATTGAGATATTTCACAGTCTTGTAATTT                     
rJMSF032J21+          AAGCTAAGGATATTGAGATATTTCACAGTCTNGTAATTTTACACAAAATTCTTAAATAAA
rJMSF051K15+          AAGCTAAGGATATTGAGATATTTCACAGTCTTATAATTTTACACAAAATTCTTAAATAAA
                      ____________________________________________________________
consensus             AAGCTAAGGATATTGAGATATTTCACAGTCTTGTAATTTTACACAAAATTCTTAAATAAA
 
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rJMSF032J21+          GCAACTTAAAGAATTTCATTCATATTCTTGTATTTTAAGTTTACATCTGAACC       
rJMSF051K15+          GCAACTTAAAGAATTTCATTCATATTCTTGTATTTTAAGTTTACATCTGAACCCTGTGCT
                      ____________________________________________________________
consensus             GCAACTTAAAGAATTTCATTCATATTCTTGTATTTTAAGTTTACATCTGAACCCTGTGCT