| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008O01 | Sequence | 537 | 012166 (4) | 548 | 010106 (6) | gb|KCW47234.1| | 3e-69 | hypothetical protein EUGRSUZ_K01043 [Eucalyptus grandis] | |||
| JMSF036L20 | Sequence | 634 | 012166 (4) | 682 | 010106 (6) | gb|KCW47234.1| | 2e-106 | hypothetical protein EUGRSUZ_K01043 [Eucalyptus grandis] | |||
| JMSF045K11 | Sequence | 796 | 012166 (4) | emb|CDP14812.1| | 1e-47 | unnamed protein product [Coffea canephora] | 780 | 010106 (6) | gb|KCW47234.1| | 3e-129 | hypothetical protein EUGRSUZ_K01043 [Eucalyptus grandis] |
| JMSF046O20 | Sequence | 666 | 012166 (4) | emb|CDP14812.1| | 3e-20 | unnamed protein product [Coffea canephora] | 660 | 010106 (6) | gb|KCW47234.1| | 2e-99 | hypothetical protein EUGRSUZ_K01043 [Eucalyptus grandis] |
| JMSF050N01 | Sequence | 703 | 010106 (6) | gb|KCW47234.1| | 1e-139 | hypothetical protein EUGRSUZ_K01043 [Eucalyptus grandis] | 717 | 010106 (6) | gb|KCW47234.1| | 1e-67 | hypothetical protein EUGRSUZ_K01043 [Eucalyptus grandis] |
This contig is upended
. : . : . : . : . : . :
JMSF050N01- C
____________________________________________________________
consensus C
. : . : . : . : . : . :
JMSF050N01- TAAAGATGTTCAGGTCTCTTTCCTTCAAGTTTTATTACTGATTCGGCAAATGGAACATAG
____________________________________________________________
consensus TAAAGATGTTCAGGTCTCTTTCCTTCAAGTTTTATTACTGATTCGGCAAATGGAACATAG
. : . : . : . : . : . :
JMSF050N01- TAACACCCAATCAGGAGCTGCCAAAGTTTCAATTTTGATGATCGGGCAACAGGCAATCAT
____________________________________________________________
consensus TAACACCCAATCAGGAGCTGCCAAAGTTTCAATTTTGATGATCGGGCAACAGGCAATCAT
. : . : . : . : . : . :
JMSF050N01- GGATGCTTATCTATGTCTTTTGCATCTGACTGCAGGGATACTGGTTGAGTCCCTCTTCAA
____________________________________________________________
consensus GGATGCTTATCTATGTCTTTTGCATCTGACTGCAGGGATACTGGTTGAGTCCCTCTTCAA
. : . : . : . : . : . :
JMSF050N01- TGCTTTCGCAACTGCTGCATTTTTCAAGTTTGTGGTTTTCTCAATTTTCGAGATGCGATA
____________________________________________________________
consensus TGCTTTCGCAACTGCTGCATTTTTCAAGTTTGTGGTTTTCTCAATTTTCGAGATGCGATA
. : . : . : . : . : . :
JMSF050N01- CCTTCTTGCTATCTGGAAAGCAAGTAGACCTATGAACAGTGGAGAGGGTTGGGAAGCAAT
rJMSF045K11+ GTTGGGAAGCAAT
____________________________________________________________
consensus CCTTCTTGCTATCTGGAAAGCAAGTAGACCTATGAACAGTGGAGAGGGTTGGGAAGCAAT
. : . : . : . : . : . :
JMSF050N01- GAGACGTGAATTGTCAGTTTTGTACAGCCGTTTCTATGGCATACTCTTAGGTGGCATTTT
rJMSF045K11+ GAGACGTGAATTGTCAGTTTTGTACAGCCGTTTCTATGGCATACTCTTAGGTGGCATTTT
____________________________________________________________
consensus GAGACGTGAATTGTCAGTTTTGTACAGCCGTTTCTATGGCATACTCTTAGGTGGCATTTT
. : . : . : . : . : . :
JMSF050N01- GATCATGTATGAATTTCACAAGTTTCTGCGGCCTATTCTTCTCCTTCTCCACGCTTTTTG
rJMSF036L20+ CTGCGGCCTATTCTTCTCCTTCTCCACGCTTTTTG
rJMSF046O20+ TCCACGCTTTTNG
rJMSF045K11+ GATCATGTATGAATTTCACAAGTTTCTGCGGCCTATTCTTCTCCTTCTCCACGCTTTTTG
____________________________________________________________
consensus GATCATGTATGAATTTCACAAGTTTCTGCGGCCTATTCTTCTCCTTCTCCACGCTTTTTG
. : . : . : . : . : . :
JMSF050N01- GATACCCCAAATCATAACTAATGTCATTCGTGACTCGAGAAAACCGCTGCATCCTCATTA
rJMSF036L20+ GATACCCCAAATCATAACTAATGTCATTCGTGACTCGAGAAAACCGCTGCATCCTCATTA
rJMSF046O20+ GATACCCCNAATCATAACTAATGTCATTCGTGACTCGAGAAAACCGCTGCATCCTCATTA
rJMSF045K11+ GATACCCCAAATCATAACTAATGTCATTCGTGACTCGAGAAAACCGCTGCATCCTCATTA
____________________________________________________________
consensus GATACCCCAAATCATAACTAATGTCATTCGTGACTCGAGAAAACCGCTGCATCCTCATTA
. : . : . : . : . : . :
JMSF050N01- CATCTTAGGAATGACTATTACTCGGCTAGCAATTCCACTGTATATCTTTGGCTGTCCTCA
rJMSF036L20+ CATCTTAGGAATGACTATTACTCGGCTAGCAATTCCACTGTATATCTTTGGCTGTCCTCA
rJMSF046O20+ CATCTTAGGAATGACTATTACTCGGCTAGCAATTCCACTGTATATCTTTGGCTGTCCTCA
rJMSF045K11+ CATCTTAGGAATGACTATTACTCGGCTAGCAATTCCACTGTATATCTTTGGCTGTCCTCA
rJMFF008O01+ GTCCTCA
____________________________________________________________
consensus CATCTTAGGAATGACTATTACTCGGCTAGCAATTCCACTGTATATCTTTGGCTGTCCTCA
. : . : . : . : . : . :
JMSF050N01- CAACTTCATGCGCATAGAGACAGACAAGAAGTGGTGTATTTGCTTGGGTATTTTTATGGG
rJMSF036L20+ CAACTTCATGCGCATAGAGACAGACAAGAAATGGTGTATTTGCTTGGGTATTTTTATGGG
rJMSF046O20+ CAACTTCATGCGCATAGAGACAGACAAGAAATGGTGTATTTGCTTGGGTATTTTTATGGG
rJMSF045K11+ CAACTTCATGCGCATAGAGACAGACAAGAAATGGTGTATTTGCTTGGGTATTTTTATGGG
rJMFF008O01+ CAACTTCATGCGCATAGAGACAGACAAGAAATGGTGTATTTGCTTGGGTATTTTTATGGG
rJMSF050N01+ CTTCATGCGCATAGAGACAGACAAGAAGTGGTGTATTTGCTTGGGTATTTTTATGGG
____________________________________________________________
consensus CAACTTCATGCGCATAGAGACAGACAAGAAATGGTGTATTTGCTTGGGTATTTTTATGGG
. : . : . : . : . : . :
JMSF050N01- AATTCAGGCGTCAATTCTTCTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
rJMSF036L20+ AATTCAGGCGTCAATTCTTCTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
rJMSF046O20+ AATTCAGGCGTCAATTCTTCTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
rJMSF045K11+ AATTCAGGCGTCAATTCTTCTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
rJMFF008O01+ AATTCAGGCGTCAATTNTTNTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
rJMSF050N01+ AATTCAGGCGTCAATTCTTCTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
____________________________________________________________
consensus AATTCAGGCGTCAATTCTTCTTCTGCAGCACTATTTTGGATCTCGGTGGTTCATTCCACG
. : . : . : . : . : . :
JMSF050N01- TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGA
rJMSF036L20+ TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGATCAAGATGCAGTTCAGCC
rJMSF046O20+ TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGATCAAGATGCAGTTCAGCC
rJMSF045K11+ TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGATCAAGATGCAGTTCAGCC
rJMFF008O01+ TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGATCAAGATGCAGTTCAGCC
rJMSF050N01+ TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGATCAAGATGCAGTTCAGCC
____________________________________________________________
consensus TCAGATTTTACCCGAGAAGTACAGCTATTATAGAAAGTTCGATCAAGATGCAGTTCAGCC
. : . : . : . : . : . :
rJMSF036L20+ TATTGATTGTGTTATTTGCATGACTAACATCGACCTGAGTCAGCGTTCCAATGATTGCAT
rJMSF046O20+ TATTGATTGTGTTATTTGCATGACTAACATCGACCTGAGTCAGCGTTCCAATGATTGCAT
rJMSF045K11+ TATTGATTGTGTTATTTGCATGACTAACATCGACCTGAGTCAGCGTTCCAATGATTGCAT
rJMFF008O01+ TATTGATTGTGTTATTTGCATGACTAACATCGACCTGAGTCAGCGTTCCAATGATTGCAT
rJMSF050N01+ TATTGATTGTGTTATTTGCATGACTAACATCGACCTGAGTCAGCGTTCCAATGATTGCAT
____________________________________________________________
consensus TATTGATTGTGTTATTTGCATGACTAACATCGACCTGAGTCAGCGTTCCAATGATTGCAT
. : . : . : . : . : . :
rJMSF036L20+ GGTGACACCCTGTGATCATTTCTTTCATTCTGGCTGTTTGCAAAGATGGATGGACATAAA
rJMSF046O20+ GGTGACACCCTGTGATCATTTCTTTCATTCTGGCTGTTTGCAAAGATGGATGGACATAAA
rJMSF045K11+ GGTGACACCCTGTGATCATTTCTTTCATTCTGGCTGTTTGCAAAGATGGATGGACATAAA
rJMFF008O01+ GGTGACACCCTGTGATCATTTCTTTCATTCTGGCTGTTTGCAAAGATGGATGGACATAAA
rJMSF050N01+ GGTGACACCCTGTGATCATTTCTTTCATTCTGGCTGTTTGCAAAGATGGATGGACATAAA
____________________________________________________________
consensus GGTGACACCCTGTGATCATTTCTTTCATTCTGGCTGTTTGCAAAGATGGATGGACATAAA
. : . : . : . : . : . :
rJMSF036L20+ GATGGAGTGTCCAACTTGCCGGAGGCCTCTCCCCCCGGCTTAAGTTGATTGTATTATCCC
rJMSF046O20+ GATGGAGTGTCCAACTTGCCGGAGGCCTCTCCCCCCGGCTTAAGTTGATTGTATTATCCC
rJMSF045K11+ GATGGAGTGTCCAACTTGCCGGAGGCCTCTCCCCCCGGCTTAAGTTGATTGTATTATCCC
rJMFF008O01+ GATGGAGTGTCCAACTTGCCGGAGGCCTCTCCCCCCGGCTTAAGTTGATTGTATTATCCC
rJMSF050N01+ GATGGAGTGTCCAACTTGCCGGAGGCCTCTCCCCCCGGCTTAAGTTGATTGTATTATCCC
____________________________________________________________
consensus GATGGAGTGTCCAACTTGCCGGAGGCCTCTCCCCCCGGCTTAAGTTGATTGTATTATCCC
. : . : . : . : . : . :
rJMSF036L20+ GTGTTTATATGTATTAATTACAGAGCTGCTGAAACGTTGGCCACCGTTCTGTAAAGGTTG
rJMSF046O20+ GTGTTTATATGTATTAATTACAGAGCTGCTGAAACGTTGGCCACCGTTCTGTAAAGGTTG
rJMSF045K11+ GTGTTTATATGTATTAATTACAGAGCTGCTGAAACGTTGGCCACCGTTCTGTAAAGGTTG
rJMFF008O01+ GTGTTTATATGTATTAATTACAGAGCTGCTGAAACGTTGGCCACCGTTCTGTAAAGGTTG
rJMSF050N01+ GTGTTTATATGTATTAATTACAGAGCTGCTGAAACGTTGGCCACCGTTCTGTAAAGGTTG
____________________________________________________________
consensus GTGTTTATATGTATTAATTACAGAGCTGCTGAAACGTTGGCCACCGTTCTGTAAAGGTTG
. : . : . : . : . : . :
rJMSF036L20+ AAGGGCAAATGTGATTACACTGAGCCGGCTCTTTCACACAACAAAACTAACATAGAGACT
rJMSF046O20+ AAGGGCAAATGTGATTACACTGAGCCGGCTCTTTCACACAACAAAACTAACATAGAGACT
rJMSF045K11+ AAGGGCAAATGTGATTACACTGAGCCGGCTCTTTCACACAACAAAACTAACATAGAGACT
rJMFF008O01+ AAGGGCAAATGTGATTACACTGAGCCGGCTCTTTCACACAACAAAACTAACATAGAGACT
rJMSF050N01+ AAGGGCAAATGTGATTACACTGAGCCGGCTCTTTCACACAACAAAACTAACATAGAGACT
____________________________________________________________
consensus AAGGGCAAATGTGATTACACTGAGCCGGCTCTTTCACACAACAAAACTAACATAGAGACT
. : . : . : . : . : . :
rJMSF036L20+ GCAGGTCTGCCCTGAATTGCTGCAATTATAATGTACAATATACTCTT
rJMSF046O20+ GCAGGTCTGCCCTGAATTGCTGCAATTATAATGTACAATATACTCTT
rJMSF045K11+ GCAGGTCTGCCCTGAATTGCTGCAATTATAATGTACAATATACTCTT
rJMFF008O01+ GCAGGTCTGCCCTGAATTGCTGCAATTATAATGTACAATATACTCTTTGTAAGAATCCAT
rJMSF050N01+ GCAGGTCTGCCCTGAATTGCTGCAATTATAATGTACAATATACTCTTTGTAAGAATCCAT
____________________________________________________________
consensus GCAGGTCTGCCCTGAATTGCTGCAATTATAATGTACAATATACTCTTTGTAAGAATCCAT
. : . : . : . : . : . :
rJMFF008O01+ T
rJMSF050N01+ TAATGGCAGTGCTTATTCTTGTCCATTTTACCTTGTTTCGACGAATCTGTGTTTTTACCT
____________________________________________________________
consensus TAATGGCAGTGCTTATTCTTGTCCATTTTACCTTGTTTCGACGAATCTGTGTTTTTACCT
. : . : . : . : . : . :
rJMSF050N01+ CTGCTGAGAAGTGTGCAATTCTGCAGATCATAGACTTGCGATTTTTAATCTGTAAATCCA
____________________________________________________________
consensus CTGCTGAGAAGTGTGCAATTCTGCAGATCATAGACTTGCGATTTTTAATCTGTAAATCCA
. : . : . : . : . : . :
rJMSF050N01+ GTGTATGATACTATGATTCAAGATTCTTGATTTACAATTACATACCAGACTGTACCATAC
____________________________________________________________
consensus GTGTATGATACTATGATTCAAGATTCTTGATTTACAATTACATACCAGACTGTACCATAC