Contig 010105:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035D23Sequence699010105 (4)ref|XP_009614351.1|88.2PREDICTED: uncharacterized protein LOC104107292 [Nicotiana tomentosiformis]561010105 (4)ref|XP_009614351.1|71.6PREDICTED: uncharacterized protein LOC104107292 [Nicotiana tomentosiformis]
JMSF050I17Sequence678010105 (4)ref|XP_009614351.1|77.8PREDICTED: uncharacterized protein LOC104107292 [Nicotiana tomentosiformis]761010105 (4)ref|XP_009614351.1|78.6PREDICTED: uncharacterized protein LOC104107292 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050I17- TAAACTTCAGTC
JMSF035D23- GCCGTTAAACTTCAGTC
                      ____________________________________________________________
consensus GCCGTTAAACTTCAGTC
 
. : . : . : . : . : . :
JMSF050I17- CAATCCTCTCCCCTACGAACACGAAACCTCAGACCTTTCCCAGTCTCCCATGCCGGAAAC
JMSF035D23- CAATCCTCTCCCCTACGAACACGAAACCTCAGACCTTTCCCAGTCTCCCATGCCGGAAAC
                      ____________________________________________________________
consensus CAATCCTCTCCCCTACGAACACGAAACCTCAGACCTTTCCCAGTCTCCCATGCCGGAAAC
 
. : . : . : . : . : . :
JMSF050I17- TAGACTTTGTGCATGAAAACCTCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
JMSF035D23- TAGACTTTGTGCATGAAAACCTCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
rJMSF050I17+ TCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
                      ____________________________________________________________
consensus TAGACTTTGTGCATGAAAACCTCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
 
. : . : . : . : . : . :
JMSF050I17- TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTCTTCGCCCAGCTCG
JMSF035D23- TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTCTTCGCCCAGCTCG
rJMSF050I17+ TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTTTTCGCCCAGCTCG
                      ____________________________________________________________
consensus TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTCTTCGCCCAGCTCG
 
. : . : . : . : . : . :
JMSF050I17- TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
JMSF035D23- TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
rJMSF050I17+ TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
                      ____________________________________________________________
consensus TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
 
. : . : . : . : . : . :
JMSF050I17- GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
JMSF035D23- GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
rJMSF035D23+ TCCGCCCCCTCTAAGGAACTCT
rJMSF050I17+ GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
                      ____________________________________________________________
consensus GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
 
. : . : . : . : . : . :
JMSF050I17- TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
JMSF035D23- TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
rJMSF035D23+ TCTTG-TTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
rJMSF050I17+ TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
                      ____________________________________________________________
consensus TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
 
. : . : . : . : . : . :
JMSF050I17- CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
JMSF035D23- CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
rJMSF035D23+ CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
rJMSF050I17+ CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
                      ____________________________________________________________
consensus CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
 
. : . : . : . : . : . :
JMSF050I17- TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
JMSF035D23- TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
rJMSF035D23+ TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
rJMSF050I17+ TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
                      ____________________________________________________________
consensus TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
 
. : . : . : . : . : . :
JMSF050I17- AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
JMSF035D23- AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
rJMSF035D23+ AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
rJMSF050I17+ AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
                      ____________________________________________________________
consensus AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
 
. : . : . : . : . : . :
JMSF050I17- CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
JMSF035D23- CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
rJMSF035D23+ CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
rJMSF050I17+ CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
                      ____________________________________________________________
consensus CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
 
. : . : . : . : . : . :
JMSF050I17- TATCACCGGANGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
JMSF035D23- TATCACCGGANGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
rJMSF035D23+ TATCACCGGAGGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
rJMSF050I17+ TATCACCGGAGGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
                      ____________________________________________________________
consensus TATCACCGGAGGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
 
. : . : . : . : . : . :
JMSF050I17- CTT
JMSF035D23- CTTTCTCCACTCCATGTACTTC
rJMSF035D23+ CTTTCTCCACTCCATGTACTTCCCCAACCTACTTCACTCCGTCAGCCTCGCCGGCTCGTG
rJMSF050I17+ CTTTCTCCACTCCATGTACTTCCCCAACCTACTTCACTCCGTCAGCCTCGCCGGCTCGTG
                      ____________________________________________________________
consensus CTTTCTCCACTCCATGTACTTCCCCAACCTACTTCACTCCGTCAGCCTCGCCGGCTCGTG
 
. : . : . : . : . : . :
rJMSF035D23+ AAGAAGGTGACAGAGCTGTTACAATTGTGGAGGCTACTCTCGCCGGCGTATAAAATGCCG
rJMSF050I17+ AAGAAGGTGACAGAGCTGTTACAATTGTGGAGGCTACTCTCGCCGGCGTATAAAATGCCG
                      ____________________________________________________________
consensus AAGAAGGTGACAGAGCTGTTACAATTGTGGAGGCTACTCTCGCCGGCGTATAAAATGCCG
 
. : . : . : . : . : . :
rJMSF035D23+ CCACCTCCGCCGGCCGGCGAGGTTTAGCACGGCATTGATCTGACTCC
rJMSF050I17+ CCACCTCCGCCGGCCGGCGAGGTTTAGCACGGCATTGATCTGACTCCTAGTATATCACTA
                      ____________________________________________________________
consensus CCACCTCCGCCGGCCGGCGAGGTTTAGCACGGCATTGATCTGACTCCTAGTATATCACTA