Contig 010105: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
JMSF050I17- TAAACTTCAGTC
JMSF035D23- GCCGTTAAACTTCAGTC
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consensus GCCGTTAAACTTCAGTC
. : . : . : . : . : . :
JMSF050I17- CAATCCTCTCCCCTACGAACACGAAACCTCAGACCTTTCCCAGTCTCCCATGCCGGAAAC
JMSF035D23- CAATCCTCTCCCCTACGAACACGAAACCTCAGACCTTTCCCAGTCTCCCATGCCGGAAAC
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consensus CAATCCTCTCCCCTACGAACACGAAACCTCAGACCTTTCCCAGTCTCCCATGCCGGAAAC
. : . : . : . : . : . :
JMSF050I17- TAGACTTTGTGCATGAAAACCTCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
JMSF035D23- TAGACTTTGTGCATGAAAACCTCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
rJMSF050I17+ TCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
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consensus TAGACTTTGTGCATGAAAACCTCAGAGTTACTGTAAAGATGGCCGGCGGTATAAGCAAAC
. : . : . : . : . : . :
JMSF050I17- TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTCTTCGCCCAGCTCG
JMSF035D23- TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTCTTCGCCCAGCTCG
rJMSF050I17+ TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTTTTCGCCCAGCTCG
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consensus TTGGCACGGCCCTCGCCGTGGTCTTCGTTGTCTTATTGGCGGCGCTCTTCGCCCAGCTCG
. : . : . : . : . : . :
JMSF050I17- TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
JMSF035D23- TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
rJMSF050I17+ TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
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consensus TTTTCGTGCTCTGGCGCCGCCGCGCCTTCCGCCGTAGCATCACGCCGGAAAGTGGAAGCG
. : . : . : . : . : . :
JMSF050I17- GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
JMSF035D23- GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
rJMSF035D23+ TCCGCCCCCTCTAAGGAACTCT
rJMSF050I17+ GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
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consensus GCGACGTCGAGAGGCAATCTCAGTCATCCTCTTTCTTCTCCGCCCCCTCTAAGGAACTCT
. : . : . : . : . : . :
JMSF050I17- TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
JMSF035D23- TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
rJMSF035D23+ TCTTG-TTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
rJMSF050I17+ TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
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consensus TCTTGTTTCTCTGCCTCCGGACTGACACTCACCTCGCCAGAATCGAACCCAGCTCCACCC
. : . : . : . : . : . :
JMSF050I17- CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
JMSF035D23- CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
rJMSF035D23+ CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
rJMSF050I17+ CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
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consensus CGAGTCTCCACAACTCGGCCGGGTCAACCCCCGAGTCGCCGGAGATGGAGCTCGTCGACC
. : . : . : . : . : . :
JMSF050I17- TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
JMSF035D23- TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
rJMSF035D23+ TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
rJMSF050I17+ TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
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consensus TGTTGAAGCTCCAGGGAGGCCTTTATGGACCCTCCAAGATTCTCTTCACGATCAAGGAAG
. : . : . : . : . : . :
JMSF050I17- AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
JMSF035D23- AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
rJMSF035D23+ AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
rJMSF050I17+ AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
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consensus AAGAGAAAGAAGACTTAGAATCAGTTTGTTCTTCGGTGGAAAAGGGTCCCAGAAGGAAAA
. : . : . : . : . : . :
JMSF050I17- CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
JMSF035D23- CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
rJMSF035D23+ CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
rJMSF050I17+ CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
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consensus CGAATAGTAAACGGAGGAGCTTGGAGGATTTCTTCGAGATCGACGGCGACTCGCCGGTAA
. : . : . : . : . : . :
JMSF050I17- TATCACCGGANGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
JMSF035D23- TATCACCGGANGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
rJMSF035D23+ TATCACCGGAGGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
rJMSF050I17+ TATCACCGGAGGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
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consensus TATCACCGGAGGTGGTGGCCACGGTGGCCGATGACTGCCATTTGGATATAGAAACGACGC
. : . : . : . : . : . :
JMSF050I17- CTT
JMSF035D23- CTTTCTCCACTCCATGTACTTC
rJMSF035D23+ CTTTCTCCACTCCATGTACTTCCCCAACCTACTTCACTCCGTCAGCCTCGCCGGCTCGTG
rJMSF050I17+ CTTTCTCCACTCCATGTACTTCCCCAACCTACTTCACTCCGTCAGCCTCGCCGGCTCGTG
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consensus CTTTCTCCACTCCATGTACTTCCCCAACCTACTTCACTCCGTCAGCCTCGCCGGCTCGTG
. : . : . : . : . : . :
rJMSF035D23+ AAGAAGGTGACAGAGCTGTTACAATTGTGGAGGCTACTCTCGCCGGCGTATAAAATGCCG
rJMSF050I17+ AAGAAGGTGACAGAGCTGTTACAATTGTGGAGGCTACTCTCGCCGGCGTATAAAATGCCG
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consensus AAGAAGGTGACAGAGCTGTTACAATTGTGGAGGCTACTCTCGCCGGCGTATAAAATGCCG
. : . : . : . : . : . :
rJMSF035D23+ CCACCTCCGCCGGCCGGCGAGGTTTAGCACGGCATTGATCTGACTCC
rJMSF050I17+ CCACCTCCGCCGGCCGGCGAGGTTTAGCACGGCATTGATCTGACTCCTAGTATATCACTA
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consensus CCACCTCCGCCGGCCGGCGAGGTTTAGCACGGCATTGATCTGACTCCTAGTATATCACTA