Contig 010104:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007F08Sequence370010469 (2)776010104 (2)ref|XP_009764933.1|2e-84PREDICTED: protein FAM135B-like [Nicotiana sylvestris]
JMSF049P13Sequence676015870ref|XP_006344989.1|2e-05PREDICTED: protein FAM135B-like [Solanum tuberosum]759010104 (2)ref|XP_009764933.1|2e-83PREDICTED: protein FAM135B-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF007F08+             GGCCACATCTNGNTACTGTACAGTTCAATTCTTTATTTAATTCTGGGCTATGGCTTT
rJMSF049P13+                               TACAGTTCAAATTCTTATTTAATTCTGGGCTATGGCTTT
                      ____________________________________________________________
consensus                GGCCACATCTNGNTACTGTACAGTTCAATTTTTTATTTAATTCTGGGCTATGGCTTT
 
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rJMSF007F08+          GAAGAAGCTCAAGGGCACACAGTGCATTCATCAGCTTACGTTTACAGATGATCCTGATAT
rJMSF049P13+          GAAGNAGCTCAAGGGCACACAGTGCATTCATCAGCTTACGTTTACAGATGATCCTGATAT
                      ____________________________________________________________
consensus             GAAGAAGCTCAAGGGCACACAGTGCATTCATCAGCTTACGTTTACAGATGATCCTGATAT
 
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rJMSF007F08+          ACAAAATACATTCTTGTACAAACTTTGCAAGCGGAAGACCTTGGAGAACTTCAGGAATAT
rJMSF049P13+          ACAAAATACATTCTTGTACAAACTTTGCAAGCGGAAGACCTTGGAGAACTTCAGGAATAT
                      ____________________________________________________________
consensus             ACAAAATACATTCTTGTACAAACTTTGCAAGCGGAAGACCTTGGAGAACTTCAGGAATAT
 
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rJMSF007F08+          TATTCTGTTATCTTCACCACAGGATGGTTACGTTCCATATCATTCTGCTAGGATTGAGAT
rJMSF049P13+          TATTCTGTTATCTTCACCACAGGATGGTTACGTTCCATATCATTCTGCTAGGATTGAGAT
                      ____________________________________________________________
consensus             TATTCTGTTATCTTCACCACAGGATGGTTACGTTCCATATCATTCTGCTAGGATTGAGAT
 
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rJMSF007F08+          GTGCCAAGCATCTTCGGCAGACAGCTCAAAGAAGGGAAAAGTATTTATGGAGATGCTCAA
rJMSF049P13+          GTGCCAAGCATCTTCGGCAGACAGCTCAAAGAAGGGAAAAGTATTTATGGAGATGCTCAA
                      ____________________________________________________________
consensus             GTGCCAAGCATCTTCGGCAGACAGCTCAAAGAAGGGAAAAGTATTTATGGAGATGCTCAA
 
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rJMSF007F08+          CCATTGCTTAGACCAGATACGCTCTCCTTCACACGATCATCGGGTTTTCATGCGATGCGA
rJMSF049P13+          CCATTGCTTAGACCAGATACGCTCTCCTTCACACGATCATCGGGTTTTCATGCGATGCGA
                      ____________________________________________________________
consensus             CCATTGCTTAGACCAGATACGCTCTCCTTCACACGATCATCGGGTTTTCATGCGATGCGA
 
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rJMSF007F08+          TGTTAATTTCGATACGTCCTTGCAGGGGAGGAACTTGAACACCATGATAGGAAGGGCAGC
rJMSF049P13+          TGTTAATTTCGATACGTCCTTGCAGGGGAGGAACTTGAACACCATGATAGGAAGGGCAGC
                      ____________________________________________________________
consensus             TGTTAATTTCGATACGTCCTTGCAGGGGAGGAACTTGAACACCATGATAGGAAGGGCAGC
 
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rJMSF007F08+          TCACATCGAGTTTCTGGAATCAGACACTTTTGTGAAATTCATAATGTGGTCATTTCCAGA
rJMSF049P13+          TCACATCGAGTTTCTGGAATCAGACACTTTTGTGAAATTCATAATGTGGTCATTTCCAGA
                      ____________________________________________________________
consensus             TCACATCGAGTTTCTGGAATCAGACACTTTTGTGAAATTCATAATGTGGTCATTTCCAGA
 
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rJMSF007F08+          AGTATTCCGTTGATTATTTGGGAGCTTTTCCATTCCCTAAATCTTCACATCCAGAGCCTG
rJMSF049P13+          AGTATTCCGTTGATTATTTGGGAGCTTTTCCATTCCCTAAATCTTCACATCCAGAGCCTG
                      ____________________________________________________________
consensus             AGTATTCCGTTGATTATTTGGGAGCTTTTCCATTCCCTAAATCTTCACATCCAGAGCCTG
 
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rJMSF007F08+          CCTATAGTGCACATGAACAGTTCTGGATGCCCATTTTCATCTCCAGCGCATTTGGTGCTC
rJMSF049P13+          CCTATAGTGCACATGAACAGTTCTGGATGCCCATTTTCATCTCCAGCGCATTTGGTGCTC
                      ____________________________________________________________
consensus             CCTATAGTGCACATGAACAGTTCTGGATGCCCATTTTCATCTCCAGCGCATTTGGTGCTC
 
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rJMSF007F08+          TGAATTATTTGCCTCAAGTCACTCCATATTAACCTAATAGCTAATATAAGGTTTTTACTC
rJMSF049P13+          TGAATTATTTGCCTCAAGTCACTCCATATTAACCTAATAGCTAATATAAGGTTTTTACTC
                      ____________________________________________________________
consensus             TGAATTATTTGCCTCAAGTCACTCCATATTAACCTAATAGCTAATATAAGGTTTTTACTC
 
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rJMSF007F08+          CTGAAGGGCAGTTTTACTCGCTGCAAACTGCACTTTGTAGCAATGAACCACTTAAAAAAA
rJMSF049P13+          CTGAAGGGCAGTTTTACTCGCTGCAAACTGCACTTTGTAGCAATGAACCACTTAAAAAAA
                      ____________________________________________________________
consensus             CTGAAGGGCAGTTTTACTCGCTGCAAACTGCACTTTGTAGCAATGAACCACTTAAAAAAA
 
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rJMSF007F08+          TACTGGGTTTCAAACTTCTTCGTATAGTTTAGAATCAGATAGGTATAATTCTCCAAATC 
rJMSF049P13+          TACTGGGTTTCAAACTTCTTCGTATAGTTTAGAATCAGATAGGTATAATTCTCCAAATCT
                      ____________________________________________________________
consensus             TACTGGGTTTCAAACTTCTTCGTATAGTTTAGAATCAGATAGGTATAATTCTCCAAATCT