Contig 010103:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005E01Sequence478005226 (6)ref|XP_007044913.1|231TCP-1/cpn60 chaperonin family protein isoform 2 [Theobroma cacao] gb|EOY00745.1|598010103 (9)ref|XP_004239159.1|6e-107PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMFF040F17Sequence563005226 (6)ref|XP_004239159.1|4e-95PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]746010103 (9)ref|XP_004239159.1|9e-122PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMFN011H23Sequence638010103 (9)ref|XP_004239159.1|1e-135PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF010F15Sequence248017771gb|EYU30595.1|2e-46hypothetical protein MIMGU_mgv1a004275mg [Erythranthe guttata]748010103 (9)ref|XP_004239159.1|9e-124PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF017A03Sequence646010103 (9)ref|XP_004171246.1|2e-71PREDICTED: T-complex protein 1 subunit epsilon-like [Cucumis sativus] gb|KGN623
JMSF038J20Sequence685005226 (6)ref|XP_010248739.1|4e-124PREDICTED: T-complex protein 1 subunit epsilon [Nelumbo nucifera]840010103 (9)ref|XP_004239159.1|2e-151PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF039J20Sequence687005226 (6)ref|XP_010248739.1|2e-123PREDICTED: T-complex protein 1 subunit epsilon [Nelumbo nucifera]666010103 (9)ref|XP_004239159.1|2e-110PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF048K12Sequence695005226 (6)ref|XP_010248739.1|5e-124PREDICTED: T-complex protein 1 subunit epsilon [Nelumbo nucifera]760010103 (9)ref|XP_004239159.1|3e-122PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]
JMSF049O05Sequence663005226 (6)ref|XP_004239159.1|3e-108PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]729010103 (9)ref|XP_004239159.1|1e-114PREDICTED: T-complex protein 1 subunit epsilon [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN011H23- CAGAAATGCAAG
                      ____________________________________________________________
consensus CAGAAATGCAAG
 
. : . : . : . : . : . :
JMFN011H23- GATGTTGGTGCGACCTTGGTTATTTGCCAATGGGGATTTGATGATGAAGCAAACCACTTA
rJMSF038J20+ GATTTGATGATGAAGCAAACCACTTA
                      ____________________________________________________________
consensus GATGTTGGTGCGACCTTGGTTATTTGCCAATGGGGATTTGATGATGAAGCAAACCACTTA
 
. : . : . : . : . : . :
JMFN011H23- CTAATGCATAGAAATTTGCCAGCTGTTAGATGGGTTGGTGGTGTGGAGCTGGAGCTGATT
rJMSF038J20+ CTAATGCATAGAAATTTGCCAGCTGTTAGATGGGTTGGTGGTGTGGAGCTGGAGCTGATT
                      ____________________________________________________________
consensus CTAATGCATAGAAATTTGCCAGCTGTTAGATGGGTTGGTGGTGTGGAGCTGGAGCTGATT
 
. : . : . : . : . : . :
JMFN011H23- GCAATAGCCACTGGTGGGCGAATTGTGCCAAGATTTCAAGAGTTGACCCCGGAAAAACTT
rJMSF010F15+ GAATTGTGCCAAGATTTCAAGAGTTGACCCCGGAAAAACTT
rJMSF038J20+ GCAATAGCCACTGGTGGGCGAATTGTGCCAAGATTTCAAGAGTTGACCCCGGAAAAACTT
rJMFF040F17+ TGCCAAGATTTCAAGAGTTGACCCCGGAAAAACTT
rJMSF048K12+ TGTGCCAAGATTTCAAGAGTTGACCCCGGAAAAACTT
rJMSF049O05+ CGGAAAAACTT
                      ____________________________________________________________
consensus GCAATAGCCACTGGTGGGCGAATTGTGCCAAGATTTCAAGAGTTGACCCCGGAAAAACTT
 
. : . : . : . : . : . :
JMFN011H23- GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATCGAATGATTTAT
rJMSF010F15+ GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATCGAATGATTTAT
rJMSF038J20+ GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATCGAATGATTTAT
rJMSF039J20+ TGGGNTGGTTCGTGAGAAATCNTTTGGTACGACCAAGGATCGAATGATTTAT
rJMFF005E01+ TTCGTGAGAAATCTTTTGGTACGACCAAGGATNGAATGATTTAT
rJMSF017A03+ TTCGTGAGAAATCTTNTGGTACGACCAAGGATCGAANGATTNAT
rJMFF040F17+ GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATCGAATGATTTAT
rJMSF048K12+ GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATCGAATGATTTAT
rJMSF049O05+ GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATAGAATGATTTAT
                      ____________________________________________________________
consensus GGCAGGGCTGGGCTGGTTCGTGAGAAATCTTTTGGTACGACCAAGGATCGAATGATTTAT
 
. : . : . : . : . : . :
JMFN011H23- ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMSF010F15+ ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMSF038J20+ ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMSF039J20+ ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMFF005E01+ ATNGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMSF017A03+ ATTGANCATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMFF040F17+ ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMSF048K12+ ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
rJMSF049O05+ ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
                      ____________________________________________________________
consensus ATTGAACATTGTGCAAATTCAAGGGCAGTGACTATATTCATACGTGGGGGTAACAAAATG
 
. : . : . : . : . : . :
JMFN011H23- ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMSF010F15+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMSF038J20+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMSF039J20+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMFF005E01+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMSF017A03+ ATGATAGAGGAGACAAAACGCAGCATTCATGATGCTTGNGTGTGTNGCCAGAAATNTTAT
rJMFF040F17+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMSF048K12+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
rJMSF049O05+ ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
                      ____________________________________________________________
consensus ATGATAGAGGAGACAAAACGCAGCCTTCATGATGCTT-TGTGTGTTGCCAGAAATCTTAT
 
. : . : . : . : . : . :
JMFN011H23- TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMSF010F15+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMSF038J20+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMSF039J20+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMFF005E01+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMSF017A03+ TCGGAACAACTCTNTAGTATATGGTGGTGGCTCAGCNGAGATNTCTTCCTCAATTGCCNT
rJMFF040F17+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMSF048K12+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
rJMSF049O05+ TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
                      ____________________________________________________________
consensus TCGGAACAACTCTATAGTATATGGTGGTGGCTCAGCTGAGATCTCTTCCTCAATTGCTGT
 
. : . : . : . : . : . :
JMFN011H23- GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMSF010F15+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMSF038J20+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMSF039J20+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMFF005E01+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMSF017A03+ GGAAGCTGNTGCTGATAAATATCCAGNNGTTGAGCANTATGCAATCAGGGCATTTGCAGA
rJMFF040F17+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMSF048K12+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
rJMSF049O05+ GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
                      ____________________________________________________________
consensus GGAAGCTGCTGCTGATAAATATCCAGGTGTTGAGCAGTATGCAATCAGGGCATTTGCAGA
 
. : . : . : . : . : . :
JMFN011H23- TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMSF010F15+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMSF038J20+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMSF039J20+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMFF005E01+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMSF017A03+ TGCTTTAGATGCTGTNCCCATGGCCCTTGNTGAGAATAGTGNCCTTCANCCCATTGAAAC
rJMFF040F17+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMSF048K12+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
rJMSF049O05+ TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
                      ____________________________________________________________
consensus TGCTTTAGATGCTGTCCCCATGGCCCTTGCTGAGAATAGTGGCCTTCAACCCATTGAAAC
 
. : . : . : . : . : . :
JMFN011H23- TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMSF010F15+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMSF038J20+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMSF039J20+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMFF005E01+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMSF017A03+ TCTATCTGCNGTTAAATCNCAGCAAATCCAGGAAGATAATCCATGNTGCGGGATNGATTG
rJMFF040F17+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMSF048K12+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
rJMSF049O05+ TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
                      ____________________________________________________________
consensus TCTATCTGCTGTTAAATCACAGCAAATCCAGGAAAATAATCCATGTTGCGGGATTGATTG
 
. : . : . : . : . : . :
JMFN011H23- NCATGACGTTGGCACAAATGACATGCG
rJMSF010F15+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMSF038J20+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMSF039J20+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMFF005E01+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMSF017A03+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMFF040F17+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMSF048K12+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
rJMSF049O05+ CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
                      ____________________________________________________________
consensus CAATGACGTTGGCACAAATGACATGCGAGAGCAAAATGTGTTTGAGACTTTGATTGGGAA
 
. : . : . : . : . : . :
rJMSF010F15+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
rJMSF038J20+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
rJMSF039J20+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
rJMFF005E01+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTNTAAAGATTGATGATGT
rJMSF017A03+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
rJMFF040F17+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
rJMSF048K12+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
rJMSF049O05+ GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
                      ____________________________________________________________
consensus GCAACAGCAGGTTTTACTCGCAACTCAAGTTGTTAAGATGATTCTAAAGATTGATGATGT
 
. : . : . : . : . : . :
rJMSF010F15+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
rJMSF038J20+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
rJMSF039J20+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
rJMFF005E01+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTNGAAGCATGTA-GAACAAGTG
rJMSF017A03+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTACGAACAAGTG
rJMFF040F17+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
rJMSF048K12+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
rJMSF049O05+ TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
                      ____________________________________________________________
consensus TATCACGCCTGCGGATTATTAGTGAGTGATTAGGCAGGTCGAAGCATGTA-GAACAAGTG
 
. : . : . : . : . : . :
rJMSF010F15+ GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTACGCATCTGAGTGT
rJMSF038J20+ GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTACGCATCTGAGTGT
rJMSF039J20+ GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTAC
rJMFF005E01+ GGTTTAACATTCAACT
rJMSF017A03+ GGTTTAACATTCAACNTTTGGTATGGTTANGAAATTTTTGGTGGTTACGCAT
rJMFF040F17+ GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTACGCATCTGAGTGT
rJMSF048K12+ GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTACGCATCTGAGTGT
rJMSF049O05+ GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTACGCATCTGAGTGT
                      ____________________________________________________________
consensus GGTTTAACATTCAACTTTTGGTATGGTTAAGAAATTTTTGGTGGTTACGCATCTGAGTGT
 
. : . : . : . : . : . :
rJMSF010F15+ TTGGAGTTTGTTATGTATTATTAC
rJMSF038J20+ TTGGAGTTTGTTATGTATTATTACATTTGAAGAT
rJMFF040F17+ TTGGAGTTTGTTATGTATTATTACATTTGAAGATTGTTTCGT
rJMSF048K12+ TTGGAGTTTGTTATGTATTATTACATTTGAAGATTGTTTCGT
rJMSF049O05+ TTGGAGTTTGTTATGTATTATTACATTTGAAGATTGTTTCGTGATCATGAGTTGACATTA
                      ____________________________________________________________
consensus TTGGAGTTTGTTATGTATTATTACATTTGAAGATTGTTTCGTGATCATGAGTTGACATTA