Contig 010098:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049J14+                                                       CATCAAGACCGCTTA
                      ____________________________________________________________
consensus                                                          CATCAAGACCGCTTA
 
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rJMSF049J14+          TCACGCTTGATTGATAGATTGTCAAACTATGCTGCTTCAAGTCCAGAAGTGAGTGTTCTC
                      ____________________________________________________________
consensus             TCACGCTTGATTGATAGATTGTCAAACTATGCTGCTTCAAGTCCAGAAGTGAGTGTTCTC
 
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rJMSF049J14+          CGATCTTAAACCACAACATTAAGGTTGTGGTTCTTTTTTGTTGTTGTGGCATGGTGTTAT
                      ____________________________________________________________
consensus             CGATCTTAAACCACAACATTAAGGTTGTGGTTCTTTTTTGTTGTTGTGGCATGGTGTTAT
 
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rJMSF049J14+          CAACATGTGTTATTGCACTTTTTGAAGTTAACCATGAAATATTCTGTTCCTAGAGCCATT
                      ____________________________________________________________
consensus             CAACATGTGTTATTGCACTTTTTGAAGTTAACCATGAAATATTCTGTTCCTAGAGCCATT
 
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rJMSF049J14+          TTTCTACTCTTTGTGAATCAATTTGGTCCCAGTCCCCACTCCCCAGCAGCCCAGCTTGAT
                      ____________________________________________________________
consensus             TTTCTACTCTTTGTGAATCAATTTGGTCCCAGTCCCCACTCCCCAGCAGCCCAGCTTGAT
 
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rJMSF049J14+          ACCAATGCCTGCTCTCATTCATCTTCTTCCTTTTGTTTTTTCTTGGTGTGATCTCGTTTT
                      ____________________________________________________________
consensus             ACCAATGCCTGCTCTCATTCATCTTCTTCCTTTTGTTTTTTCTTGGTGTGATCTCGTTTT
 
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rJMSF049J14+          GCTTTGTCTAATATTTTGTTGGAAGACAAATTTTTATCTTTGCAGGACTCATCAAGGGGT
                      ____________________________________________________________
consensus             GCTTTGTCTAATATTTTGTTGGAAGACAAATTTTTATCTTTGCAGGACTCATCAAGGGGT
 
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rJMSF049J14+          GATCCTAGTGATTACAGTAGTCAAAAGAACAGACGAGCTCTCTGATTCAATGTTATGGGT
                      ____________________________________________________________
consensus             GATCCTAGTGATTACAGTAGTCAAAAGAACAGACGAGCTCTCTGATTCAATGTTATGGGT
 
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rJMSF049J14+          AGCATGGACGATTCTGTACTCTCACTGCGGGAGAGATTAAATGGCCCACTCCTTAACACT
                      ____________________________________________________________
consensus             AGCATGGACGATTCTGTACTCTCACTGCGGGAGAGATTAAATGGCCCACTCCTTAACACT
 
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rJMFF048N22+                                        AAGTTGTTCTTCTTGGAGGATCAGTTTGGG
rJMSF049J14+          ATGGTTTGTCAAGAGGTAATTTTTACTGTGAAGTTGTTCTTCTTGGAGGATCAGTTTGGG
                      ____________________________________________________________
consensus             ATGGTTTGTCAAGAGGTAATTTTTACTGTGAAGTTGTTCTTCTTGGAGGATCAGTTTGGG
 
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rJMFF048N22+          AGCTCT-CTTTCTGGTGCAAGACATATTTCTGATACAATTATTTGTTGTAATTTCATTCT
rJMSF049J14+          AGCTCTCCTTTCTTGTGCAAGACATATTTCTGATACAATTATTTATTGTAATTTCATTCT
                      ____________________________________________________________
consensus             AGCTCTCCTTTCTTGTGCAAGACATATTTCTGATACAATTATTTGTTGTAATTTCATTCT
 
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rJMFF048N22+          TTTCTTTTGTAGATTTCAATTATTTTTAATTTAGAATTGTAAATATGTAATTTCATTTAT
rJMSF049J14+          TTTCTTTTGTAGATTTCAATTATTTTTAATTTAGAATTGTAAATATGTAATTTCATTTAT
                      ____________________________________________________________
consensus             TTTCTTTTGTAGATTTCAATTATTTTTAATTTAGAATTGTAAATATGTAATTTCATTTAT
 
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rJMFF048N22+          TGTTTTTTACAATACTGTAGTAATTTCAT                               
rJMSF049J14+          TGTTTTTACAAATACTGTAGTAATTTCATAATGGTTGTGTGAGAATGCAGGGATTAGAAT
                      ____________________________________________________________
consensus             TGTTTTTTCCAATACTGTAGTAATTTCATAATGGTTGTGTGAGAATGCAGGGATTAGAAT