Contig 010085:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005D09Sequence267016680128010085 (2)
JMSF046K10Sequence818010085 (2)ref|XP_009624840.1|8e-59PREDICTED: uncharacterized protein LOC104115821 isoform X5 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046K10+ TTTGTGCCCTACCTCAACTAAAAGCTTTAAATTGTTAG
                      ____________________________________________________________
consensus TTTGTGCCCTACCTCAACTAAAAGCTTTAAATTGTTAG
 
. : . : . : . : . : . :
rJMSF046K10+ AGAACTGAGATATTTTTTGCTTTATTTATTATATTTGTTACTGAAGTTCATAAATTTCCA
                      ____________________________________________________________
consensus AGAACTGAGATATTTTTTGCTTTATTTATTATATTTGTTACTGAAGTTCATAAATTTCCA
 
. : . : . : . : . : . :
rJMSF046K10+ GGAGAGAGAGTGACAACTCTGAAGCTGAAAGAGCTCAGCATATTAAACAACTTCGTGAAC
                      ____________________________________________________________
consensus GGAGAGAGAGTGACAACTCTGAAGCTGAAAGAGCTCAGCATATTAAACAACTTCGTGAAC
 
. : . : . : . : . : . :
rJMSF046K10+ TTTAGGAGCATATTCAAGAGAAATAACATCAGTTTATGGAATTGCAGGAATAGAACAGAA
                      ____________________________________________________________
consensus TTTAGGAGCATATTCAAGAGAAATAACATCAGTTTATGGAATTGCAGGAATAGAACAGAA
 
. : . : . : . : . : . :
rJMSF046K10+ TTGCAAAGGAAACCATTCTTTACAAAGACGAACAGATGAGGGAGGCCCATGCTTTGTTGA
                      ____________________________________________________________
consensus TTGCAAAGGAAACCATTCTTTACAAAGACGAACAGATGAGGGAGGCCCATGCTTTGTTGA
 
. : . : . : . : . : . :
rJMSF046K10+ CTCGTGCTCAGGAGATCGATTCCTTGCAACAAGCTAAACTACGTAAACGAGCTGAACAAT
                      ____________________________________________________________
consensus CTCGTGCTCAGGAGATCGATTCCTTGCAACAAGCTAAACTACGTAAACGAGCTGAACAAT
 
. : . : . : . : . : . :
rJMSF046K10+ ATAATCAGCTTTGGCTTGGTTGTCAGAGACAGTTTGGCGAGAGGAAGTGCCTACATTTAC
                      ____________________________________________________________
consensus ATAATCAGCTTTGGCTTGGTTGTCAGAGACAGTTTGGCGAGAGGAAGTGCCTACATTTAC
 
. : . : . : . : . : . :
rJMSF005D09+ ATGAGGCAAGAGAAAGGAATGGTACTTCGACTGANAGTTCTCAA
rJMSF046K10+ ATATGCAACAACTCCAATGAGGCAAGAGAAAGGAATGGTACTTCGACTGATAGTTCTCAA
                      ____________________________________________________________
consensus ATATGCAACAACTCCAATGAGGCAAGAGAAAGGAATGGTACTTCGACTGATAGTTCTCAA
 
. : . : . : . : . : . :
rJMSF005D09+ GTCTCAAAGGAATCTTCNAAAGANACTTCTCAGTATGGGCAGANCAACGGCNACAANCTT
rJMSF046K10+ GTCTCAAAGGAATCTTCAAAAGATACTTCTCAGTATGGGCAGAACAATGGCAACAAACTT
                      ____________________________________________________________
consensus GTCTCAAAGGAATCTTCAAAAGATACTTCTCAGTATGGGCAGAACAATGGCAACAAACTT
 
. : . : . : . : . : . :
rJMSF005D09+ AATGAGAANGGTA
rJMSF046K10+ AATGAGAATGGTAATAATGATGCCTCTAGTGGAAACTCTGGACACATACCAAATGGAAAT
                      ____________________________________________________________
consensus AATGAGAATGGTAATAATGATGCCTCTAGTGGAAACTCTGGACACATACCAAATGGAAAT
 
. : . : . : . : . : . :
rJMSF046K10+ GCCGAAAATGCTTCATCATTTACTTTTATTGGGAATGTGTCAACTCAGAGTGATCTCCAT
                      ____________________________________________________________
consensus GCCGAAAATGCTTCATCATTTACTTTTATTGGGAATGTGTCAACTCAGAGTGATCTCCAT
 
. : . : . : . : . : . :
rJMSF046K10+ GGCGTTCCACTTGCTCCTTCATCTTTACTTGGGATGGCAACCTTCATTCCACCAGGTTAA
                      ____________________________________________________________
consensus GGCGTTCCACTTGCTCCTTCATCTTTACTTGGGATGGCAACCTTCATTCCACCAGGTTAA
 
. : . : . : . : . : . :
rJMSF046K10+ ATTGCTGCAGTGCATCCATTTTTAATGCATCAATAGGGAGTAGGTATGATTTGATCATTA
                      ____________________________________________________________
consensus ATTGCTGCAGTGCATCCATTTTTAATGCATCAATAGGGAGTAGGTATGATTTGATCATTA
 
. : . : . : . : . : . :
rJMSF046K10+ GAACGTTGTGATCATTTAGATTTGGTTCGTGGAATTGTTTTTTGTAGTATTATGACTGGA
                      ____________________________________________________________
consensus GAACGTTGTGATCATTTAGATTTGGTTCGTGGAATTGTTTTTTGTAGTATTATGACTGGA