Contig 010084:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040J20+                                         GGAATCAGGATTTTCACATGTTAGTGACA
                      ____________________________________________________________
consensus                                            GGAATCAGGATTTTCACATGTTAGTGACA
 
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rJMSF040J20+          GATCCTAGTAGACAAAAAGCTTTATGTTGAAGTGAAGGATTCCCTTGGATTTGCAGATGT
rJMSF046G06+                                                        GGATTNGCAGATGT
                      ____________________________________________________________
consensus             GATCCTAGTAGACAAAAAGCTTTATGTTGAAGTGAAGGATTCCCTTGGATTTGCAGATGT
 
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rJMSF040J20+          GACTGTTGGTAGAGGGGAGGTTAATCTTGGGTCATTCAAAGATACAGTACCTATGGATGT
rJMSF046G06+          GACTGTTGGTAGAGGGGAGGTTAATCTTGGGTCATTCAAAGATACAGTACCTATGGATGT
                      ____________________________________________________________
consensus             GACTGTTGGTAGAGGGGAGGTTAATCTTGGGTCATTCAAAGATACAGTACCTATGGATGT
 
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rJMSF040J20+          GGTTGTGGGCCTAGGAGGTTGGGGCTTATTTAGTCCGCGGCCAGCTGGAGAAATCTTACT
rJMSF046G06+          GGTTGTGGGCCTAGGAGGTTGGGGCTTATTTAGTCCGCGGCCAGCTGGAGAAATCTTACT
                      ____________________________________________________________
consensus             GGTTGTGGGCCTAGGAGGTTGGGGCTTATTTAGTCCGCGGCCAGCTGGAGAAATCTTACT
 
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rJMSF040J20+          GCGATTGACATATAAGGCATATGTTGATGATGAAGATGATGAGAAGACTGTTGTAAGATC
rJMSF046G06+          GCGATTGACATATAAGGCATATGTTGATGATGAAGATGATGAGAAGACTGTTGTAAGATC
                      ____________________________________________________________
consensus             GCGATTGACATATAAGGCATATGTTGATGATGAAGATGATGAGAAGACTGTTGTAAGATC
 
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rJMSF040J20+          CTTGGATGGAGATGTATCAGATGATGAGTTGTCTGACTCTGAGCAATTGGACACTAATGT
rJMSF046G06+          CTTGGATGGAGATGTATCAGATGATGAGTTGTCTGACTCTGAGCAATTGGACACTAATGT
                      ____________________________________________________________
consensus             CTTGGATGGAGATGTATCAGATGATGAGTTGTCTGACTCTGAGCAATTGGACACTAATGT
 
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rJMSF040J20+          CTCTGAGCAGATCGGAGTGAAGTCTTATAGTGAATTGGATAAAGAATCGTTTATGGATGT
rJMSF046G06+          CTCTGAGCAGATCGGAGTGAAGTCTTATAGTGAATTGGATAAAGAATCGTTTATGGATGT
                      ____________________________________________________________
consensus             CTCTGAGCAGATCGGAGTGAAGTCTTATAGTGAATTGGATAAAGAATCGTTTATGGATGT
 
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rJMSF040J20+          TCTTGCCGCTTTAATTGTTAGCGAGGAGTTTCTAGGTATAGTATCATCTGAAACCGCGAA
rJMSF046G06+          TCTTGCCGCTTTAATTGTTAGCGAGGAGTTTCTAGGTATAGTATCATCTGAAACCGCGAA
                      ____________________________________________________________
consensus             TCTTGCCGCTTTAATTGTTAGCGAGGAGTTTCTAGGTATAGTATCATCTGAAACCGCGAA
 
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rJMSF040J20+          TGGCAAATATGTAGATGATGTTAAAAGTGCAGTGCCAACATCCACGTTACGAAGTCCTCC
rJMSF046G06+          TGGCAAATATGTAGATGATGTTAAAAGTGCAGTGCCAACATCCACGTTACGAAGTCCTCC
                      ____________________________________________________________
consensus             TGGCAAATATGTAGATGATGTTAAAAGTGCAGTGCCAACATCCACGTTACGAAGTCCTCC
 
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rJMSF040J20+          TGCCAGACCTCCACCGCAAAGCCCTGAAAGTGGCAGTGAAAGTTTTAGAGGTTCAGCATT
rJMSF046G06+          TGCCAGACCTCCACCGCAAAGCCCTGAAAGTGGCAGTGAAAGTTTTAGAGGTTCAGCATT
                      ____________________________________________________________
consensus             TGCCAGACCTCCACCGCAAAGCCCTGAAAGTGGCAGTGAAAGTTTTAGAGGTTCAGCATT
 
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rJMSF040J20+          GGTTTGGCTTGCTATAGTTACGAGTATCTCAGTCCTCATTTCTTTGAATATTGGTGGTTC
rJMSF046G06+          GGTTTGGCTTGCTATAGTTACGAGTATCTCAGTCCTCATTTCTTTGAATATTGGTGGTTC
                      ____________________________________________________________
consensus             GGTTTGGCTTGCTATAGTTACGAGTATCTCAGTCCTCATTTCTTTGAATATTGGTGGTTC
 
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rJMSF040J20+          GAGCTTTTTCAATCCATGATTGACGATATTACTCCAGTAGTCCAGTGAATGAATTGTGGA
rJMSF046G06+          GAGCTTTTTCAATCCATGATTGACGATATTACTCCAGTAGTCCAGTGAATGAATTGTGGA
                      ____________________________________________________________
consensus             GAGCTTTTTCAATCCATGATTGACGATATTACTCCAGTAGTCCAGTGAATGAATTGTGGA
 
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rJMSF040J20+          ACTCTGGAAGTAACACCAACCACAGTATAATTTCGACAAGCCCTTCCGGTGCATGTACTA
rJMSF046G06+          ACTCTGGAAGTAACACCAACCACAGTATAATTTCGACAAGCCCTTCCGGTGCATGTACTA
                      ____________________________________________________________
consensus             ACTCTGGAAGTAACACCAACCACAGTATAATTTCGACAAGCCCTTCCGGTGCATGTACTA
 
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rJMSF040J20+          TGAATACATATCAAGTTGCTGCTCCTCTCATATTTTTCTATTTGAGGCTGTGCAA-CTCG
rJMSF046G06+          TGAATACATATCAAGTTGCTGCTCCTCTCATATTTTTCTATTTGAGGCTGTGCAANCTCG
                      ____________________________________________________________
consensus             TGAATACATATCAAGTTGCTGCTCCTCTCATATTTTTCTATTTGAGGCTGTGCAANCTCG
 
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rJMSF040J20+          TGGTGCATATAATAGAGAATAATACATATTCTTAAACATATTATACATATCA        
rJMSF046G06+          TGGTGCATATAATAGAGAATAATACATATTCTTAAACATATTATACATATCAGCTCTCTC
                      ____________________________________________________________
consensus             TGGTGCATATAATAGAGAATAATACATATTCTTAAACATATTATACATATCAGCTCTCTC