Contig 010080:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF045B10Sequence678010080 (2)ref|XP_009775188.1|6e-96PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]690010080 (2)ref|XP_009775188.1|1e-76PREDICTED: caffeoylshikimate esterase-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF045B10-                         GATGTCTGATTCTCTCCCCCAACCCCCACCCTCTCTCTCTCTCTCT
                      ____________________________________________________________
consensus                           GATGTCTGATTCTCTCCCCCAACCCCCACCCTCTCTCTCTCTCTCT
 
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JMSF045B10-           CTCTCTCAAGCTTAAATTTCTTGAAATCTCAGTGCCTACACACCCTTCAATTCTCATGGC
                      ____________________________________________________________
consensus             CTCTCTCAAGCTTAAATTTCTTGAAATCTCAGTGCCTACACACCCTTCAATTCTCATGGC
 
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JMSF045B10-           TATTACTGAAGATGAAACCAGCAGTATCATATATGAAGAGGAAATGGTGAGGAGTTCGCG
                      ____________________________________________________________
consensus             TATTACTGAAGATGAAACCAGCAGTATCATATATGAAGAGGAAATGGTGAGGAGTTCGCG
 
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JMSF045B10-           AGGAATGAAGCTTTTCACGTGCAGATGGGTGCCAAGAAGCTGCGAGCCAAAGGCTTTGAT
                      ____________________________________________________________
consensus             AGGAATGAAGCTTTTCACGTGCAGATGGGTGCCAAGAAGCTGCGAGCCAAAGGCTTTGAT
 
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JMSF045B10-           CTTCCTCTGCCATGGATACGCCNTGGAGTGCAGTGTTTCCATGAAAGGTACAGCAACGAG
                      ____________________________________________________________
consensus             CTTCCTCTGCCATGGATACGCCNTGGAGTGCAGTGTTTCCATGAAAGGTACAGCAACGAG
 
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JMSF045B10-           GCTGGTTAACGCAGGGTACGCAGTGTACGGAATGGACTATGAAGGGCACGGGAAGTCAGA
                      ____________________________________________________________
consensus             GCTGGTTAACGCAGGGTACGCAGTGTACGGAATGGACTATGAAGGGCACGGGAAGTCAGA
 
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JMSF045B10-           AGGTCTTCAGGGATTCNTCCCCAGCTTTGATGCTGTTGTCACGGATTGCTCTCAACATTA
                      ____________________________________________________________
consensus             AGGTCTTCAGGGATTCNTCCCCAGCTTTGATGCTGTTGTCACGGATTGCTCTCAACATTA
 
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JMSF045B10-           CTCCAATATATGTGAGAGGCAAGAAAATGTGAAAAGGATGAGGATATTGGTGGGAGAATC
                      ____________________________________________________________
consensus             CTCCAATATATGTGAGAGGCAAGAAAATGTGAAAAGGATGAGGATATTGGTGGGAGAATC
 
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JMSF045B10-           AATGGGAGGAGCTATGGCTCTTCTCTTACATAGAAAAAAGCCTCATTTTTGGGATGGTGC
                      ____________________________________________________________
consensus             AATGGGAGGAGCTATGGCTCTTCTCTTACATAGAAAAAAGCCTCATTTTTGGGATGGTGC
 
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JMSF045B10-           TGTCCTTGTGGCACCAATGTGCAAGATTGCAGAGGAAATGAAGCCACCAGCAATAGTATT
rJMSF045B10+                                       CAGAGGAAATGAAGCCACCAGCAATAGTATT
                      ____________________________________________________________
consensus             TGTCCTTGTGGCACCAATGTGCAAGATTGCAGAGGAAATGAAGCCACCAGCAATAGTATT
 
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JMSF045B10-           GAGTGTTTTAAAAAAGCTTAGCAAAATCATTCCCACTTGGAAGATCATTCCNACTCAAGA
rJMSF045B10+          GAGTGTTTT-AAAAAGCTTAGCAAAATCATTCCCACTTGGAAGATCATTCCAACTCAAGA
                      ____________________________________________________________
consensus             GAGTGTTTTAAAAAAGCTTAGCAAAATCATTCCCACTTGGAAGATCATTCCAACTCAAGA
 
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JMSF045B10-           TATCATTGATGCTGCCTTCNGGGACCCAGCAA                            
rJMSF045B10+          TATCATTGATGCTGCCTTCAGGGACCCAGCAATAAGAAAAGAGGTTAGGTCCAACCCACT
                      ____________________________________________________________
consensus             TATCATTGATGCTGCCTTCAGGGACCCAGCAATAAGAAAAGAGGTTAGGTCCAACCCACT
 
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rJMSF045B10+          GTGCTACAAGGGCCGACCCCGACTGCAAACTGGCTACCAATTGCTCTCCGTCAGCCTGGA
                      ____________________________________________________________
consensus             GTGCTACAAGGGCCGACCCCGACTGCAAACTGGCTACCAATTGCTCTCCGTCAGCCTGGA
 
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rJMSF045B10+          TTTGGAGAGAAGTCTTGATGAGGTGACGTTGCCATTTATAGTGACACATGGGGAGGAGGA
                      ____________________________________________________________
consensus             TTTGGAGAGAAGTCTTGATGAGGTGACGTTGCCATTTATAGTGACACATGGGGAGGAGGA
 
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rJMSF045B10+          CATAGTTACGGATCCATCGGTAAGCAAACTATTGCATGAAAAAGCTTCGAGCAGAGACAA
                      ____________________________________________________________
consensus             CATAGTTACGGATCCATCGGTAAGCAAACTATTGCATGAAAAAGCTTCGAGCAGAGACAA
 
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rJMSF045B10+          GACCCTGAAATTGTATCCCGGAATGTGGCATTCTCTAACCTACGGGGAGTTGCCTGAGAA
                      ____________________________________________________________
consensus             GACCCTGAAATTGTATCCCGGAATGTGGCATTCTCTAACCTACGGGGAGTTGCCTGAGAA
 
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rJMSF045B10+          CATCGACACCGTGTTTTTTGACATCATTGGCTGGCTCGATCAAAGGGTTGCCATGGGCAA
                      ____________________________________________________________
consensus             CATCGACACCGTGTTTTTTGACATCATTGGCTGGCTCGATCAAAGGGTTGCCATGGGCAA
 
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rJMSF045B10+          TTCTAGGTTGGAAAAACTACAGAAGAATGCAAATGACACACTCATCCTCTTCAAACCTCA
                      ____________________________________________________________
consensus             TTCTAGGTTGGAAAAACTACAGAAGAATGCAAATGACACACTCATCCTCTTCAAACCTCA
 
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rJMSF045B10+          AACTGACACTCTCCAATAAAATCAACTTTCATTCCATATCACAGCGTGCAGTGCAACTCT
                      ____________________________________________________________
consensus             AACTGACACTCTCCAATAAAATCAACTTTCATTCCATATCACAGCGTGCAGTGCAACTCT
 
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rJMSF045B10+          ACTAAAAGATATTAATTAAAATATAGTGTTTAATTTGTAAATTAATCTTATTTTTGACTT
                      ____________________________________________________________
consensus             ACTAAAAGATATTAATTAAAATATAGTGTTTAATTTGTAAATTAATCTTATTTTTGACTT
 
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rJMSF045B10+          AAACGCCATAATCTTATATTAGTATATTATATGCTAATATAATGTATGCATGCTTGAGAG
                      ____________________________________________________________
consensus             AAACGCCATAATCTTATATTAGTATATTATATGCTAATATAATGTATGCATGCTTGAGAG