Contig 010072:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019C17Sequence493000405 (4)ref|XP_009785963.1|2e-30PREDICTED: uncharacterized protein LOC104234138 isoform X3 [Nicotiana sylvestri444010072 (2)
JMSF043K14Sequence738008034 (5)ref|XP_009618326.1|1e-22PREDICTED: uncharacterized protein LOC104110515 isoform X1 [Nicotiana tomentosi465010072 (2)

Alignment

This contig is upended


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rJMSF019C17+                                             TCAACAGCAGAACCCCCGNGNCGGG
rJMSF043K14+                         ACTGGAATCTCGNTGGATCATCAACAGCAGAACCCCCGNGACGGG
                      ____________________________________________________________
consensus                            ACTGGAATCTCGNTGGATCATCAACAGCAGAACCCCCGNGACGGG
 
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rJMSF019C17+          TCNTTGGGNGGCNCTCAAGGNCAGCCAAAGCAATNGCAACAGATATGGCAAAACAACTAC
rJMSF043K14+          TCATTGGGNGGCACTCAAGGNCAGCCAAAGCAATNGCAACAGATATGGCAAAACAACTAC
                      ____________________________________________________________
consensus             TCATTGGGNGGCACTCAAGGNCAGCCAAAGCAATNGCAACAGATATGGCAAAACAACTAC
 
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rJMSF019C17+          TAATNTTACCNCCCGCCTCCTGGNGTTTTTCAGGGTCATGTGANGNGNGNGAAAGNGGCC
rJMSF043K14+          TAATNTTACCNCCCGCCTCCTGGNGTTTTTCAGGGTCANGNGANGNGNGNGAAAGNGGCC
                      ____________________________________________________________
consensus             TAATNTTACCNCCCGCCTCCTGGNGTTTTTCAGGGTCATGTGANGNGNGNGAAAGNGGCC
 
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rJMSF019C17+          TCCTGTTCAAGCTGTTGCCCTTACCGCAATAATTTGAANGCATNTGNGNTGATATGTCCC
rJMSF043K14+          TCCTGTTCAAGCTGTTGCCCTTACCGCAATAATTTGAANGCATATGNGATGATATGTCCC
                      ____________________________________________________________
consensus             TCCTGTTCAAGCTGTTGCCCTTACCGCAATAATTTGAANGCATATGNGATGATATGTCCC
 
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rJMSF019C17+          AAAGGGGNCTTGNCTGCCCCTATGCCCCGNGGNTGTACTTTACATGTTTATCAGTTAGNG
rJMSF043K14+          AAAGGGGNCTTGACTGCCCCTATGCCCCGNGGNTGTACTTTACATGTTTATCAGTTAGNG
                      ____________________________________________________________
consensus             AAAGGGGNCTTGACTGCCCCTATGCCCCGNGGNTGTACTTTACATGTTTATCAGTTAGNG
 
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rJMSF019C17+          TAACGTAGGNCNGNGNGCAAGCTAACTTAGNGTTGGNGGACNCAAATCTNTTTTCTANTT
rJMSF043K14+          TAACGTAGGACAGNGNGCAAGCTAACTTAGNGNTGGNGGACNCAAATCTCTTTTCTANTT
                      ____________________________________________________________
consensus             TAACGTAGGACAGNGNGCAAGCTAACTTAGNGTTGGNGGACNCAAATCTCTTTTCTANTT
 
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rJMSF019C17+          CTATTTTACNTTTTTTTTTCTTTTTTTTTTCTCTTCTCTTTCAATGTTATAGTCCTCTCT
rJMSF043K14+          CTATTTTACTTTTTTTTTTCTTTTTTTTTTCTCTTCTCTTTCAATGTTATAGTCCTCTCT
                      ____________________________________________________________
consensus             CTATTTTACTTTTTTTTTTCTTTTTTTTTTCTCTTCTCTTTCAATGTTATAGTCCTCTCT
 
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rJMSF019C17+          CTCATTTGGGAATTATGCTTTGCTCTTTCA                              
rJMSF043K14+          CTCATTTGGGAATTATGCTTTGCTCTTTCAACTATTGTATGTANCTAGTGTGATTGATGC
                      ____________________________________________________________
consensus             CTCATTTGGGAATTATGCTTTGCTCTTTCAACTATTGTATGTANCTAGTGTGATTGATGC