| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024N21 | Sequence | 501 | 010064 (8) | gb|EYU23638.1| | 7e-47 | hypothetical protein MIMGU_mgv1a021808mg [Erythranthe guttata] | 568 | 010064 (8) | gb|EYU23638.1| | 1e-46 | hypothetical protein MIMGU_mgv1a021808mg [Erythranthe guttata] |
| JMFN040D22 | Sequence | 128 | 010064 (8) | gb|EYU43943.1| | 7e-05 | hypothetical protein MIMGU_mgv1a017328mg [Erythranthe guttata] | |||||
| JMSF005A01 | Sequence | 262 | 010064 (8) | gb|EYU43943.1| | 9e-18 | hypothetical protein MIMGU_mgv1a017328mg [Erythranthe guttata] | |||||
| JMSF005A03 | Sequence | 266 | 009184 (3) | ref|XP_002533518.1| | 7e-25 | UDP-glucosyltransferase, putative [Ricinus communis] gb|EEF28862.1| UDP-glucosyl | 339 | 010064 (8) | ref|XP_004171616.1| | 2e-26 | PREDICTED: 40S ribosomal protein S21-2-like isoform 2 [Cucumis sativus] ref|XP_ |
| JMSF035C02 | Sequence | 568 | 010064 (8) | emb|CAN60816.1| | 1e-46 | hypothetical protein VITISV_033219 [Vitis vinifera] | 520 | 010064 (8) | emb|CAN60816.1| | 6e-47 | hypothetical protein VITISV_033219 [Vitis vinifera] |
| JMSF042K24 | Sequence | 496 | 010064 (8) | emb|CAN60816.1| | 5e-47 | hypothetical protein VITISV_033219 [Vitis vinifera] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF005A01- GGGGGTT
____________________________________________________________
consensus GGGGGTT
. : . : . : . : . : . :
JMSF005A01- TTGGTTGTGCGACGAATATAAGCCAACCTAACGGCTAACGCCTCTGCTCTTTCTTCTCGG
rJMSF035C02+ GCTCTTTCTTCTCGG
JMSF035C02- GCTCTTTCTTCTCGG
rJMSF042K24+ GCTCTTTCTTCTCGG
____________________________________________________________
consensus TTGGTTGTGCGACGAATATAAGCCAACCTAACGGCTAACGCCTCTGCTCTTTCTTCTCGG
. : . : . : . : . : . :
JMFN040D22- CCATCTTCTCGCTCCCATTTTTGGTGCTTTAACATTGTACATTTTTGCT
JMSF005A01- TCGCAGCTTCGCCATCTTCTCGCTCCCATTTTTGGTGCTTTAACATTGTACATTTTTGCT
rJMSF035C02+ TCGCAGCTTCGCCATCTTCTCGCTCCCATTTTTGGTGCTTTAACATTGTACATTTTTGCT
JMFF024N21- TTTTGCT
JMSF035C02- TCGCAGCTTCGCCATCTTCTCGCTCCCATTTTTGGTGCTTTAACATTGTACATTTTTGCT
rJMFF024N21+ TTTTGCT
rJMSF042K24+ TCGCAGCTTCGCCATCTTCTCGCTCCCATTTTTGGTGCTTTAACATTGTACATTTTTGCT
____________________________________________________________
consensus TCGCAGCTTCGCCATCTTCTCGCTCCCATTTTTGGTGCTTTAACATTGTACATTTTTGCT
. : . : . : . : . : . :
JMFN040D22- AGTATTAAATCACTTTGCTAAGATGCAGAACGACGAGGGACAAAATATGGATCTGTACAT
JMSF005A01- AGTATCAAATCACTTTGCTAAGATGCAGAACGACGAGGGACAAAATATGGATCTGTACAT
rJMSF035C02+ AGTATCAAATCACTTTGCTAAGATGCAGAACGACGAGGGACAAAATATGGATCTGTACAT
JMFF024N21- TGTTTCAAATCACGTTGCTAAGATGCAGAACGATGAGGGACAAAATATGGATCTCTATAT
JMSF035C02- AGTATCAAATCACTTTGCTAAGATGCAGAACGACGAGGGACAAAATATGGATCTGTACAT
rJMFF024N21+ TGTTTCAAATCACGTTGCTAAGATGCAGAACGATGAGGGACAAAATATGGATCTCTATAT
rJMSF042K24+ AGTATCAAATCACTTTGCTAAGATGCAGAACGACGAGGGACAAAATATGGATCTGTACAT
____________________________________________________________
consensus AGTATCAAATCACTTTGCTAAGATGCAGAACGACGAGGGACAAAATATGGATCTGTACAT
. : . : . : . : . : . :
JMFN040D22- TCCGAGGAAGTGCTCGGCC
JMSF005A01- TCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
rJMSF035C02+ TCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
JMFF024N21- CCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
rJMSF005A03+ TAAGGATCATGCATCTGTCCA
JMSF035C02- TCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
rJMFF024N21+ CCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
rJMSF042K24+ TCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
____________________________________________________________
consensus TCCGAGGAAGTGCTCGGCCACAAATAGGCTGATCACTTCTAAGGATCATGCATCTGTCCA
. : . : . : . : . : . :
JMSF005A01- GATTAATGTTGGTCA
rJMSF035C02+ GATTAATGTTGGTCATTTGAATGAGAATGGTGTATATGATGGAAAGTACACCACCTTTGC
JMFF024N21- GATAAATGTTGGTCATTTGAATGAGAATGGCGTATATGATGGAAAGTACACCACTTTTGC
rJMSF005A03+ GATTAATGTTGGTCATTTGAATGAGAATGGTGNATATGATGGAAAGTACACCACCTTTGC
JMSF035C02- GATTAATGTTGGTCATTTGAATGAGAATGGTGTATATGATGGAAAGTACACCACCTTTGC
rJMFF024N21+ GATAAATGTTGGTCATTTGAATGAGAATGGCGTATATGATGGAAAGTACACCACTTTTGC
rJMSF042K24+ GATTAATGTTGGTCATTTGAATGAGAATGGTGTATATGATGGAAAGTACACCACCTTTGC
____________________________________________________________
consensus GATTAATGTTGGTCATTTGAATGAGAATGGTGTATATGATGGAAAGTACACCACCTTTGC
. : . : . : . : . : . :
rJMSF035C02+ TTTGTGTGGATTTATTCGTGCACAGGGCGATGCAGATAGTGGTCTTGATAGGCTCTGGCA
JMFF024N21- TTTGTGTGGATTTATTCGTGCGCAGGGAGATGCAGACAGTGGTCTTGATAGGCTCTGGCA
rJMSF005A03+ TTTGTGTGGATTTATTCGTGCACAGGGCGATGCAGATAGTGGTCNNGATAGGCTCTGGCA
JMSF035C02- TTTGTGTGGATTTATTCGTGCACAGGGCGATGCAGATAGTGGTCTTGATAGGCTCTGGCA
rJMFF024N21+ TTTGTGTGGATTTATTCGTGCGCAGGGAGATGCAGACAGTGGTCTTGATAGGCTCTGGCA
rJMSF042K24+ TTTGTGTGGATTTATTCGTGCACAGGGCGATGCAGATAGTGGTCTTGATAGGCTCTGGCA
____________________________________________________________
consensus TTTGTGTGGATTTATTCGTGCACAGGGCGATGCAGATAGTGGTCTTGATAGGCTCTGGCA
. : . : . : . : . : . :
rJMSF035C02+ GAAAAAGAAAGTTGAAGTCCGCCAACAGTGATGTCTTCTGGTGG
JMFF024N21- GAAGAAGAAAGTCGAAGCCCGCGAACAGTAATGTCTTTTGGTGG
rJMSF005A03+ GAAAAAGAAAGTTGAAGTCCGCCAACAGTGATGTCTTCTGGTGG
JMSF035C02- GAAAAAGAAAGTTGAAGTCCGCCAACAGTGATGTCTTCTGGTGG
rJMFF024N21+ GAAGAAGAAAGTCGAAGCCCGCGAACAGTAATGTCTTTTGGTGG
rJMSF042K24+ GAAAAAGAAAGTTGAAGTCCGCCAACAGTGATGTCTTCTGGTGGCTGCGTTTACTGTTGT
____________________________________________________________
consensus GAAAAAGAAAGTTGAAGTCCGCCAACAGTGATGTCTTCTGGTGGCTGCGTTTACTGTTGT
. : . : . : . : . : . :
rJMSF042K24+ GCACATTGTGATGTGCGTTTGGTCTGGTTTTACAATGCCGTACACTCTAAATCATATCCT
____________________________________________________________
consensus GCACATTGTGATGTGCGTTTGGTCTGGTTTTACAATGCCGTACACTCTAAATCATATCCT
. : . : . : . : . : . :
rJMSF042K24+ TGATTTTGAAGTATGAGTTTTGCACAAATATTTGTTGTCTTGTGTTAGAGTCTACTTAAA
____________________________________________________________
consensus TGATTTTGAAGTATGAGTTTTGCACAAATATTTGTTGTCTTGTGTTAGAGTCTACTTAAA