Contig 010063:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010F10Sequence570002405 (2)ref|XP_009625584.1|4e-86PREDICTED: histone deacetylase 8 isoform X2 [Nicotiana tomentosiformis]753010063 (2)ref|XP_009625583.1|1e-76PREDICTED: histone deacetylase 8 isoform X1 [Nicotiana tomentosiformis]
JMSF042K13Sequence821002405 (2)ref|XP_009625584.1|6e-141PREDICTED: histone deacetylase 8 isoform X2 [Nicotiana tomentosiformis]838010063 (2)ref|XP_009804418.1|1e-61PREDICTED: histone deacetylase 8 isoform X1 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF010F10+ TTCGGGTATAATTTGAATGTCCCTTTGCCCAATGGAACAGGAGATAGGGGCTACGGTTA
                      ____________________________________________________________
consensus TTCGGGTATAATTTGAATGTCCCTTTGCCCAATGGAACAGGAGATAGGGGCTACGGTTA
 
. : . : . : . : . : . :
rJMFF010F10+ TGCCATGGCACATTTAGTCGTCCNTGCAGTTCAGAAGTTTGAGCCCGATATGATCGTTTT
rJMSF042K13+ CCATGGCACATTTAGTCGTCCCTGCAGTTCAGAAGTTTGAGCCCGATATGATCGTTTT
                      ____________________________________________________________
consensus TGCCATGGCACATTTAGTCGTCCCTGCAGTTCAGAAGTTTGAGCCCGATATGATCGTTTT
 
. : . : . : . : . : . :
rJMFF010F10+ TGTTGTTGGCCTGGATTCAAGTGCATTTGATCCCAATGGAAGGCAGTGCTTGAGCATGGA
rJMSF042K13+ TGTTGTTGGCCTGGATTCAAGTGCATTTGATCCCAATGGAAGGCAGTGCTTGAGCATGGA
                      ____________________________________________________________
consensus TGTTGTTGGCCTGGATTCAAGTGCATTTGATCCCAATGGAAGGCAGTGCTTGAGCATGGA
 
. : . : . : . : . : . :
rJMFF010F10+ GGGTTACAGGGAGATAGGGCGGGGTGTTCGCGCCATTGCTGACAAATATAGCAAGGGGAA
rJMSF042K13+ GGGTTACAGGGAGATAGGGCGGGGTGTTCGCGCCATTGCTGACAAATATAGCAAGGGGAA
                      ____________________________________________________________
consensus GGGTTACAGGGAGATAGGGCGGGGTGTTCGCGCCATTGCTGACAAATATAGCAAGGGGAA
 
. : . : . : . : . : . :
rJMFF010F10+ ACTCTTGATTGTGCAAGAAGGTGGATATCACATCACATATTCAGCTTACTGTCTGCACGC
rJMSF042K13+ ACTCTTGATTGTGCAAGAAGGTGGATATCACATCACATATTCAGCTTACTGTCTGCACGC
                      ____________________________________________________________
consensus ACTCTTGATTGTGCAAGAAGGTGGATATCACATCACATATTCAGCTTACTGTCTGCACGC
 
. : . : . : . : . : . :
rJMFF010F10+ GGCTCTTGAAGGCGTGTTGAATGTATCTGCAGAACCTTTGTTACCTGACCCTATTGCGCA
rJMSF042K13+ GGCTCTTGAAGGCGTGTTGAATGTATCTGCAGAACCTTTGTTACCTGACCCTATTGCGCA
                      ____________________________________________________________
consensus GGCTCTTGAAGGCGTGTTGAATGTATCTGCAGAACCTTTGTTACCTGACCCTATTGCGCA
 
. : . : . : . : . : . :
rJMFF010F10+ TTATCCCGAGGATGAATCATTCTCCATCAAAGTTATCGAGGCGATCAGGAATTACCAGAA
rJMSF042K13+ TTATCCCGAGGATGAATCATTCTCCATCAAAGTTATCGAGGCGATCAGGAATTACCAGAA
                      ____________________________________________________________
consensus TTATCCCGAGGATGAATCATTCTCCATCAAAGTTATCGAGGCGATCAGGAATTACCAGAA
 
. : . : . : . : . : . :
rJMFF010F10+ TGACACGGCGCCATTCTTGAAAGATGATGCTTAGTTATGAAGCTCTTGAAGAAGATATGG
rJMSF042K13+ TGACACGGCGCCATTCTTGAAAGATGATGCTTAGTTATGAAGCTCTTGAAGAAGATATGG
                      ____________________________________________________________
consensus TGACACGGCGCCATTCTTGAAAGATGATGCTTAGTTATGAAGCTCTTGAAGAAGATATGG
 
. : . : . : . : . : . :
rJMFF010F10+ CACTGGTGTAGAAATCTGTTATGTAAATCCTACTTTGAGATGCATGCAGCATTCTCCTTC
rJMSF042K13+ CACTGGTGTAGAAATCTGTTATGTAAATCCTACTTTGAGATGCATGCAGCATTCTCCTTC
                      ____________________________________________________________
consensus CACTGGTGTAGAAATCTGTTATGTAAATCCTACTTTGAGATGCATGCAGCATTCTCCTTC
 
. : . : . : . : . : . :
rJMFF010F10+ CTGAAATTGTAAGTTTTTTGGGGGGTGTGACGAGTGAAATTCATAGCCACTACTCGAAGG
rJMSF042K13+ CTGAAATTGTAAGTTTTTTGGGGGGTGTGACGAGTGAAATTCATAGCCACTACTCGAAGG
                      ____________________________________________________________
consensus CTGAAATTGTAAGTTTTTTGGGGGGTGTGACGAGTGAAATTCATAGCCACTACTCGAAGG
 
. : . : . : . : . : . :
rJMFF010F10+ TGTGCACGGGGTAAACTCGCCTTTTGACCCTAGCCGGCAAAGAATCACTAGGAGGTAAAT
rJMSF042K13+ TGTGCACGGGGTAAACTCGCCTTTTGACCCTAGCCGGCAAAGAATCACTAGGAGGTAAAT
                      ____________________________________________________________
consensus TGTGCACGGGGTAAACTCGCCTTTTGACCCTAGCCGGCAAAGAATCACTAGGAGGTAAAT
 
. : . : . : . : . : . :
rJMFF010F10+ CATTTTAGGTTACTCATAATTGATCGGCTCAAACCAAGAAAGCCAATAAACTGTTCCCGC
rJMSF042K13+ CATTTTAGGTTACTCATAATTGATCGGCTCAAACCAAGAAAGCCAATAAACTGTTCCCGC
                      ____________________________________________________________
consensus CATTTTAGGTTACTCATAATTGATCGGCTCAAACCAAGAAAGCCAATAAACTGTTCCCGC
 
. : . : . : . : . : . :
rJMFF010F10+ TGAACTTGTAACCTTGTGGTTACTAAGTCAACAG
rJMSF042K13+ TGAACTTGTAACCTTGTGGTTACTAAGTCAACAGTTTTGTAACAACAGTTGCATGCTGCA
                      ____________________________________________________________
consensus TGAACTTGTAACCTTGTGGTTACTAAGTCAACAGTTTTGTAACAACAGTTGCATGCTGCA
 
. : . : . : . : . : . :
rJMSF042K13+ TGCTTTAGACCGAAATATTTTAGGGATAAAATGGTAAATCTTAGCCCGGCATTCTTTTCA
                      ____________________________________________________________
consensus TGCTTTAGACCGAAATATTTTAGGGATAAAATGGTAAATCTTAGCCCGGCATTCTTTTCA
 
. : . : . : . : . : . :
rJMSF042K13+ GTTATCACATTGATCCTCTCACGTATCAGTTATGTTGGGACTCACAATTAAAGTTAATCT
                      ____________________________________________________________
consensus GTTATCACATTGATCCTCTCACGTATCAGTTATGTTGGGACTCACAATTAAAGTTAATCT