Contig 010057:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF047F15-                                                                GGTGTTG
                      ____________________________________________________________
consensus                                                                  GGTGTTG
 
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JMSF047F15-           TACACTCTTTCCACATTCATCCTTCCGTCTCTCCGGTAAACCCAAACGATGTCGTACGCA
JMSF040K10-                                                      AAACGATGTCGTACGCA
rJMSF040K10+                                                          ATGTCGTACGCA
                      ____________________________________________________________
consensus             TACACTCTTTCCACATTCATCCTTCCGTCTCTCCGGTAAACCCAAACGATGTCGTACGCA
 
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JMSF047F15-           TACCTTTTCAAGTACATCATCATCGGGGACACTGGAGTTGGAAAATCATGTCTTCTTTTG
JMSF040K10-           TACCTTTTCAAGTACATCATCATCGGGGACACTGGAGTTGGAAAATCATGTCTTCTTTTG
rJMSF040K10+          TACCTTTTCAAGTACATCATCATCGGGGACACTGGAGTTGGAAAATCATGTCTTCTTTTG
                      ____________________________________________________________
consensus             TACCTTTTCAAGTACATCATCATCGGGGACACTGGAGTTGGAAAATCATGTCTTCTTTTG
 
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JMSF047F15-           CAATTTACTGACAAACGGTTTCAACCTGTACATGATTTGACAATTGGTGTCGAATTTGGT
JMSF040K10-           CAATTTACTGACAAACGGTTTCAACCTGTACAT--ACTGACAATTGGTGTCGAATTTGGT
rJMSF047F15+                 CTGACAAACGGTTTCAACCTGTACATGATTTGACAATTGGTGTCGAATTTGGT
rJMSF040K10+          CAATTTACTGACAAACGGTTTCAACCTGTACAT--ACTGACAATTGGTGTCGAATTTGGT
                      ____________________________________________________________
consensus             CAATTTACTGACAAACGGTTTCAACCTGTACATGATTTGACAATTGGTGTCGAATTTGGT
 
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JMSF047F15-           GCTAGAATGATTACAATAGACAACAAGCCAATAAAACTGCAGATTTGGGACACGGCTGGT
JMSF040K10-           GCTAGAATGATTACAATAGACAACAAGCCAATAAAACTGCAGATTTGGGACACGGCTGGT
rJMSF047F15+          GCTAGAATGATTACAATAGACAACAAGCCAATAAAACTGCAGATTTGGGACACGGCTGGT
rJMSF040K10+          GCTAGAATGATTACAATAGACAACAAGCCAATAAAACTGCAGATTTGGGACACGGCTGGT
                      ____________________________________________________________
consensus             GCTAGAATGATTACAATAGACAACAAGCCAATAAAACTGCAGATTTGGGACACGGCTGGT
 
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JMSF047F15-           CAAGAATCTTTTAGATCTATTACAAGGTCTTATTATCGTGGTGCTGCTGGTGCACTACTT
JMSF040K10-           CAAGAATCTTTTAGATCTATTACAAGGTCTTATTATCGTGGTGCTGCTGGTGCACTACTT
rJMSF047F15+          CAAGAATCTTTTAGATCTATTACAAGGTCTTATTATCGTGGTGCTGCTGGTGCACTACTT
rJMSF040K10+          CAAGAATCTTTTAGATCTATTACAAGGTCTTATTATCGTGGTGCTGCTGGTGCACTACTT
                      ____________________________________________________________
consensus             CAAGAATCTTTTAGATCTATTACAAGGTCTTATTATCGTGGTGCTGCTGGTGCACTACTT
 
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JMSF047F15-           GTTTATGATATTACAAGGAGGGAAACTTTTAATCACCTAGCTAGTTGGTTAGAAGATGCA
JMSF040K10-           GTTTATGATATTACAAGGAGGGAAACTTTTAATCACCTAGCTAGTTGGTTAGAAGATGCA
rJMSF047F15+          GTTTATGATATTACAAGGAGGGAAACTTTTAATCACCTAGCTAGTTGGTTAGAAGATGCA
rJMSF040K10+          GTTTATGATATTACAAGGAGGGAAACTTTTAATCACCTAGCTAGTTGGTTAGAAGATGCA
                      ____________________________________________________________
consensus             GTTTATGATATTACAAGGAGGGAAACTTTTAATCACCTAGCTAGTTGGTTAGAAGATGCA
 
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JMSF047F15-           AGACAGCATGCAAATGCAAACATGACCATAATGCTGATTGGGAACAAGTGTGACCTTGCT
JMSF040K10-           AGACAGCATGCAAATGCAAACATGACCATAATGCTGATTGGGAACAAGTGTGACCTTGCT
rJMSF047F15+          AGACAGCATGCAAATGCAAACATGACCATAATGCTGATTGGGAACAAGTGTGACCTTGCT
rJMSF040K10+          AGACAGCATGCAAATGCAAACATGACCATAATGCTGATTGGGAACAAGTGTGACCTTGCT
                      ____________________________________________________________
consensus             AGACAGCATGCAAATGCAAACATGACCATAATGCTGATTGGGAACAAGTGTGACCTTGCT
 
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JMSF047F15-           CATAGAATAGCTGTAAGCACAGAGGAAGGTGAACAGTTCGCCAAGGAACATGGTTTGATA
JMSF040K10-           CATAGAAGAGCTGTAAGCACAGAGGAAGGTGAACAGTTCGCCAAGGAACATGGTTTGATA
rJMSF047F15+          CATAGAATAGCTGTAAGCACAGAGGAAGGTGAACAGTTCGCCAAGGAACATGGTTTGATA
rJMSF040K10+          CATAGAAGAGCTGTAAGCACAGAGGAAGGTGAACAGTTCGCCAAGGAACATGGTTTGATA
                      ____________________________________________________________
consensus             CATAGAATAGCTGTAAGCACAGAGGAAGGTGAACAGTTCGCCAAGGAACATGGTTTGATA
 
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JMSF047F15-           TTTATGGAGGCTTCTGCCAAAACAGCACAGAATGTGGAGGAGGCATTTATCAGAACATCT
JMSF040K10-           TTTATGGAGGCTTCTGCCAAAACAGCACAGAATGTGGAGGAGGCATTTATCAGAACATCT
rJMSF047F15+          TTTATGGAGGCTTCTGCCAAAACAGCACAGAATGTGGAGGAGGCATTTATCAGAACATCT
rJMSF040K10+          TTTATGGAGGCTTCTGCCAAAACAGCACAGAATGTGGAGGAGGCATTTATCAGAACATCT
                      ____________________________________________________________
consensus             TTTATGGAGGCTTCTGCCAAAACAGCACAGAATGTGGAGGAGGCATTTATCAGAACATCT
 
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JMSF047F15-           TCAACAATATATAAGAAAATACTGGATGGAGTATTTGACATTTCAAATGAGTCGTATGGA
JMSF040K10-           TCAACAATATATAAGAAAATACTGGATGGAGTATTTGACATTTCAAATGAGTCGTATGGA
rJMSF047F15+          TCAACAATATATAAGAAAATACTGGATGGAGTATTTGACATTTCAAATGAGTCGTATGGA
rJMSF040K10+          TCAACAATATATAAGAAAATACTGGATGGAGTATTTGACATTTCAAATGAGTCGTATGGA
                      ____________________________________________________________
consensus             TCAACAATATATAAGAAAATACTGGATGGAGTATTTGACATTTCAAATGAGTCGTATGGA
 
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JMSF047F15-           ATCAAAGTGGGGTATGGGGGCATCCCGGGGCCATC                         
JMSF040K10-           ATCAAAGTGGGGTATGGGGGCATCCCGGGGCCATCA                        
rJMSF047F15+          ATCAAAGTGGGGTATGGGGGCATCCCGGGGCCATCAGGTGGAAGAGATGGAGGTGGTGCT
rJMSF040K10+          ATCAAAGTGGGGTATGGGGGCATCCCGGGGCCATCAGGTGGAAGAGATGGAGGTGGTGCT
                      ____________________________________________________________
consensus             ATCAAAGTGGGGTATGGGGGCATCCCGGGGCCATCAGGTGGAAGAGATGGAGGTGGTGCT
 
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rJMSF047F15+          CAAGGTGGCGGTTGCTGCAGTTGAAAACCAGGAGGAGTCGGTTTGGTTGGTCACTGTTTA
rJMSF040K10+          CAAGGTGGCGGTTGCTGCAGTTGAAAACCAGGAGGAGTCGGTTTGGTTGGTCACTGTTTA
                      ____________________________________________________________
consensus             CAAGGTGGCGGTTGCTGCAGTTGAAAACCAGGAGGAGTCGGTTTGGTTGGTCACTGTTTA
 
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rJMSF047F15+          TTCGTGGTGTCATACTTGTTTGGTTCGATTGTTCAGAGCTTACGTCTGATTTGTTTGTTT
rJMSF040K10+          TTCGTGGTGTCATACTTGTTTGGTTCGATTGTTCAGAGCTTACGTCTGATTTGTTTGTTT
                      ____________________________________________________________
consensus             TTCGTGGTGTCATACTTGTTTGGTTCGATTGTTCAGAGCTTACGTCTGATTTGTTTGTTT
 
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rJMSF047F15+          GTTTGTTTGTGTCAAATTATATTACGATGTCAGGATATATGAACTGCATCAGTACATACG
rJMSF040K10+          GTTTGTTTGTGTCAAATTATATTACGATGTCTGGATATATGAACTGCATCAGTACATACG
                      ____________________________________________________________
consensus             GTTTGTTTGTGTCAAATTATATTACGATGTCTGGATATATGAACTGCATCAGTACATACG
 
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rJMSF047F15+          AACTCGTTCTTCCTCCCCAC                                        
rJMSF040K10+          AACTCGTTCTTCCTCCCCACCACTACTGTCCANCAAGTGCCTGTATTACTTAAAACTATC
                      ____________________________________________________________
consensus             AACTCGTTCTTCCTCCCCACCACTACTGTCCANCAAGTGCCTGTATTACTTAAAACTATC