Contig 010056:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040J11+                                             AATATGCAAAAGGAGAAAGAATAGA
                      ____________________________________________________________
consensus                                                AATATGCAAAAGGAGAAAGAATAGA
 
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rJMSF029H03+                                                    ATATGGTTCTGTAATTGA
rJMSF040J11+          GTTAGAGAAACAACTTGCAGCAGGTCTCTCCTTGACAACCCAATATGGTTCTGTAATTGA
                      ____________________________________________________________
consensus             GTTAGAGAAACAACTTGCAGCAGGTCTCTCCTTGACAACCCAATATGGTTCTGTAATTGA
 
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rJMSF029H03+          CTTTGATANTGCAACACCTAAAGCAGAACAACTTGGTCAATGGGCATTATCAAATTCTGT
rJMSF040J11+          CTTTGATATTGCAACACCTAAAGCAGAACAACTTGGTCAATGGGCATTATCAAATTCTGT
                      ____________________________________________________________
consensus             CTTTGATATTGCAACACCTAAAGCAGAACAACTTGGTCAATGGGCATTATCAAATTCTGT
 
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rJMSF029H03+          CACGTTGCATTCACTTATTTTGACCAATGCATTCAATGATGCATATCTAAAGCTTGCTGA
rJMSF040J11+          CACGTTGCATTCACTTATTTTGACCAATGCATTCAATGATGCATATCTAAAGCTTGCTGA
                      ____________________________________________________________
consensus             CACGTTGCATTCACTTATTTTGACCAATGCATTCAATGATGCATATCTAAAGCTTGCTGA
 
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rJMSF029H03+          TTTGTCAAAGGAACCATTTGTCACCATTTCAAATGTTAAGAGTTCAAGTATCGAGGGGAA
rJMSF040J11+          TTTGTCAAAGGAACCATTTGTCACCATTTCAAATGTTAAGAGTTCAAGTATCGAGGGGAA
                      ____________________________________________________________
consensus             TTTGTCAAAGGAACCATTTGTCACCATTTCAAATGTTAAGAGTTCAAGTATCGAGGGGAA
 
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rJMSF029H03+          GAGATATTGCATCTATGCAAGTATAAAAATTTCAACAAAGGTGAAGAACTTCTATTACAT
rJMSF040J11+          GAGATATTGCATCTATGCAAGTATAAAAATTTCAACAAAGGTGAAGAACTTCTATTACAT
                      ____________________________________________________________
consensus             GAGATATTGCATCTATGCAAGTATAAAAATTTCAACAAAGGTGAAGAACTTCTATTACAT
 
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rJMSF029H03+          TGCATGTGATGGTTGTTGGAAAGGAACTGCACATAGTTTGGGTGATGAATTTGAGTGTTC
rJMSF040J11+          TGCATGTGATGGTTGTTGGAAAGGAACTGCACATAGTTTGGGTGATGAATTTGAGTGTTC
                      ____________________________________________________________
consensus             TGCATGTGATGGTTGTTGGAAAGGAACTGCACATAGTTTGGGTGATGAATTTGAGTGTTC
 
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rJMSF029H03+          ACATTGTGGAACACTCAAAAGTAATTGCAAAACCAAGGTGTATGATGAGCATTGAACTTA
rJMSF040J11+          ACATTGTGGAACACTCAAAAGTAATTGCAAAACCAAGGTGTATGATGAGCATTGAACTTA
                      ____________________________________________________________
consensus             ACATTGTGGAACACTCAAAAGTAATTGCAAAACCAAGGTGTATGATGAGCATTGAACTTA
 
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rJMSF029H03+          CCGAAACCAATGATTCACTTGAGTCTACACTCTTTGGAAACATTGTAGAGGAGTTACTTT
rJMSF040J11+          CCGAAACCAATGATTCACTTGAGTCTACACTCTTTGGAAACATTGTAGAGGAGTTACTTT
                      ____________________________________________________________
consensus             CCGAAACCAATGATTCACTTGAGTCTACACTCTTTGGAAACATTGTAGAGGAGTTACTTT
 
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rJMSF029H03+          CACTCTCTGCCACCAAATTGGTAGACATGGACAAGAAGAATGAGACTGTTGATCTACAAA
rJMSF040J11+          CACTCTCTGCCACCAAATTGGTAGACATGGACAAGAAGAATGAGACTGTTGATCTACAAA
                      ____________________________________________________________
consensus             CACTCTCTGCCACCAAATTGGTAGACATGGACAAGAAGAATGAGACTGTTGATCTACAAA
 
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rJMSF029H03+          ATATTAAAGAGAAGTTGAGCAAGAAAACTTTCAAAGTAGAACTCCTATGCAGAAAACAAA
rJMSF040J11+          ATATTAAAGAGAAGTTGAGCAAGAAAACTTTCAAAGTAGAACTCCTATGCAGAAAACAAA
                      ____________________________________________________________
consensus             ATATTAAAGAGAAGTTGAGCAAGAAAACTTTCAAAGTAGAACTCCTATGCAGAAAACAAA
 
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rJMSF029H03+          ATTTTAGGGGAAGTGAGCAAATTAAGTATTATGTTATATCTCTACTGGAATAAAAGTCAA
rJMSF040J11+          ATTTTAGGGGAAGTGAGCAAATTAAGTATTATGTTATATCTCTACTGGAATAAAAGTCAA
                      ____________________________________________________________
consensus             ATTTTAGGGGAAGTGAGCAAATTAAGTATTATGTTATATCTCTACTGGAATAAAAGTCAA
 
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rJMSF029H03+          TCACCACTGCTAAAAGGCTCAAGAGAAAATTGATCTAGATGACACTGATGAAGACTCAAT
rJMSF040J11+          TCACCACTGCTAAAAGGCTCAAGAGAAAATTGATCTAGATGACACTGATGAAGACTCAAT
                      ____________________________________________________________
consensus             TCACCACTGCTAAAAGGCTCAAGAGAAAATTGATCTAGATGACACTGATGAAGACTCAAT
 
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rJMSF029H03+          TTCAAATCAGCCTTCAAATGTTTTTGCATATTTAGAAGATGACAT               
rJMSF040J11+          TTCAAATCAGCCTTCAAATGTTTTTGCATATTTAGAAGATGACATTACTAATGAAAAATC
                      ____________________________________________________________
consensus             TTCAAATCAGCCTTCAAATGTTTTTGCATATTTAGAAGATGACATTACTAATGAAAAATC