Contig 010054:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040G11Sequence649010054 (2)ref|XP_009779135.1|2e-119PREDICTED: caffeoylshikimate esterase [Nicotiana sylvestris]748010054 (2)ref|XP_009616354.1|2e-104PREDICTED: caffeoylshikimate esterase-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF040G11-                                                   GGGCAGATAAGCCTGTCTTC
                      ____________________________________________________________
consensus                                                     GGGCAGATAAGCCTGTCTTC
 
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JMSF040G11-           TGACTTCTGAGCAGATATCCAAACCAGAGAGCAAAGGGAGATGAAGCATCCGGTGGCGGA
                      ____________________________________________________________
consensus             TGACTTCTGAGCAGATATCCAAACCAGAGAGCAAAGGGAGATGAAGCATCCGGTGGCGGA
 
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JMSF040G11-           TGCGAACGAGGAGAGCCCGTTTGGCTCCCTGAGTGCCGACGAGTTCTATTCCCGCCATTC
                      ____________________________________________________________
consensus             TGCGAACGAGGAGAGCCCGTTTGGCTCCCTGAGTGCCGACGAGTTCTATTCCCGCCATTC
 
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JMSF040G11-           TGTGTCCCACGGTTCCGAGTTCATCACCAATTCCCGCGGCCTCAAGCTCTTCACTCAGTG
                      ____________________________________________________________
consensus             TGTGTCCCACGGTTCCGAGTTCATCACCAATTCCCGCGGCCTCAAGCTCTTCACTCAGTG
 
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JMSF040G11-           GTGGACCCCGCTACCTCCCACCAAGCTCATAGGTGCAGTCTGCGCCGTCCACGGCTTCAC
                      ____________________________________________________________
consensus             GTGGACCCCGCTACCTCCCACCAAGCTCATAGGTGCAGTCTGCGCCGTCCACGGCTTCAC
 
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JMSF040G11-           CGGCGAGTCCAGCTGGTTCGTGCAGCTCACCGCTGTTCACATAGCCAAGCATGGATTCGC
                      ____________________________________________________________
consensus             CGGCGAGTCCAGCTGGTTCGTGCAGCTCACCGCTGTTCACATAGCCAAGCATGGATTCGC
 
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JMSF040G11-           CGTTTGCGCCATCGATCACCAGGGCCACGGCTTCTCCGACGGCCTCGTGGCTCACATACC
                      ____________________________________________________________
consensus             CGTTTGCGCCATCGATCACCAGGGCCACGGCTTCTCCGACGGCCTCGTGGCTCACATACC
 
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JMSF040G11-           GGACATCAATCCTGTCGTCGACGACTGTATCTCTTTCTTCGACTCCTTCCTCGACAGCCA
                      ____________________________________________________________
consensus             GGACATCAATCCTGTCGTCGACGACTGTATCTCTTTCTTCGACTCCTTCCTCGACAGCCA
 
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JMSF040G11-           CGTGCCGTCTTACCTGCCGACTTTCCTCTACGCCGAGTCTCTCGGCGGTGCAATTGCTCT
rJMSF040G11+                                            GAGTCTCTNGGCGGTGCAATTGCTCT
                      ____________________________________________________________
consensus             CGTGCCGTCTTACCTGCCGACTTTCCTCTACGCCGAGTCTCTCGGCGGTGCAATTGCTCT
 
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JMSF040G11-           CCTAATCACTCTCCGTAGCGGTGACTCCGCCCCAAAACGGTCTTTCGATGGCGTCGTTCT
rJMSF040G11+          CCTAATCACTCTCCGTAGCGGTGACTCCGCCCCAAAACGGTCTTTCGATGGCGTCGTTCT
                      ____________________________________________________________
consensus             CCTAATCACTCTCCGTAGCGGTGACTCCGCCCCAAAACGGTCTTTCGATGGCGTCGTTCT
 
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JMSF040G11-           GAACGGAGCAATGTGTGGCATCAGCGATAAGGTCAAGCCGCCATGGCCGTTAGAGCATTT
rJMSF040G11+          GAACGGAGCAATGTGTGGCATCAGCGATAAGGTCAAGCCGCCATGNCCGTTAGAGCATTT
                      ____________________________________________________________
consensus             GAACGGAGCAATGTGTGGCATCAGCGATAAGGTCAAGCCGCCATGGCCGTTAGAGCATTT
 
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JMSF040G11-           GCTTGACATTGCCGC                                             
rJMSF040G11+          GCTTGACATTGCCGCCTTCCTTGTCCCCACCTGGCAAGTGGTTCCCACGCGCGGTTCTTT
                      ____________________________________________________________
consensus             GCTTGACATTGCCGCCTTCCTTGTCCCCACCTGGCAAGTGGTTCCCACGCGCGGTTCTTT
 
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rJMSF040G11+          GCTTGGCGTCTCTTTCAAGGAGGAANGGAAGAGGAAGNTAGCGATAGCAAGCCCGAGGAG
                      ____________________________________________________________
consensus             GCTTGGCGTCTCTTTCAAGGAGGAANGGAAGAGGAAGNTAGCGATAGCAAGCCCGAGGAG
 
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rJMSF040G11+          GCCTGTAGCGAAGCCNCGAGNTGCGACTGCGCGTGAATTNTTGAGGGTGTGCAGAGAATT
                      ____________________________________________________________
consensus             GCCTGTAGCGAAGCCNCGAGNTGCGACTGCGCGTGAATTNTTGAGGGTGTGCAGAGAATT
 
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rJMSF040G11+          GCAGGGAAAGTTTGAGGAAGTGAAAGTGCCGTTTNTGATTATCCACGGCGGTGACGACGT
                      ____________________________________________________________
consensus             GCAGGGAAAGTTTGAGGAAGTGAAAGTGCCGTTTNTGATTATCCACGGCGGTGACGACGT
 
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rJMSF040G11+          CGTCTGCGATCCGGCCTGCGCGGAGGAGCTGTACAGACGCGCGGCGAGCAAGGATAAGAC
                      ____________________________________________________________
consensus             CGTCTGCGATCCGGCCTGCGCGGAGGAGCTGTACAGACGCGCGGCGAGCAAGGATAAGAC
 
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rJMSF040G11+          TCTGAACATTTATCCGGGCATGTGGCACCANCTGGTGGGTGAGCCGGAGGAGGATGTCGA
                      ____________________________________________________________
consensus             TCTGAACATTTATCCGGGCATGTGGCACCANCTGGTGGGTGAGCCGGAGGAGGATGTCGA
 
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rJMSF040G11+          TCGCGTATTCGGTGACGTCGTGGTGTGGCTCACAACTAGAGCTGAACGCGCAACCAACCA
                      ____________________________________________________________
consensus             TCGCGTATTCGGTGACGTCGTGGTGTGGCTCACAACTAGAGCTGAACGCGCAACCAACCA
 
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rJMSF040G11+          AAAGTCTGCAGAAGACGGCGGAGCGGTGCCGGAGTAGATGGGCAATATTCGGTACGTGGC
                      ____________________________________________________________
consensus             AAAGTCTGCAGAAGACGGCGGAGCGGTGCCGGAGTAGATGGGCAATATTCGGTACGTGGC
 
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rJMSF040G11+          CGGGAATGGAACCGTNCGATTTAAATGCGAATTTCTTATTACCCCTTGAAGCCTATATAC
                      ____________________________________________________________
consensus             CGGGAATGGAACCGTNCGATTTAAATGCGAATTTCTTATTACCCCTTGAAGCCTATATAC
 
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rJMSF040G11+          CCCTTGAAACCTATATACTAGCATTCCTAATTGGATCGTTGAGTTGTTATTTGACCTCAT
                      ____________________________________________________________
consensus             CCCTTGAAACCTATATACTAGCATTCCTAATTGGATCGTTGAGTTGTTATTTGACCTCAT