Contig 010052:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017D01Sequence758010052 (4)emb|CDP05185.1|3e-114unnamed protein product [Coffea canephora]
JMSF040A13Sequence679009278 (7)744010052 (4)emb|CDP05185.1|3e-101unnamed protein product [Coffea canephora]
JMSF045H09Sequence752009278 (7)803010052 (4)emb|CDP05185.1|1e-127unnamed protein product [Coffea canephora]
JMSF050B23Sequence621009278 (7)754010052 (4)emb|CDP05185.1|6e-114unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF045H09+                                         ATATTTGATACTACACCATCAAAAAGTTG
                      ____________________________________________________________
consensus                                            ATATTTGATACTACACCATCAAAAAGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF045H09+          TATCTTCTGAGTTAACTGTCCAAATCAAGTGTTCCTTGGTTTACATGGATTTTGAAGGCC
rJMSF050B23+                      TAACTGTCCAAGTCAAGTGTTCCTTGGTTTACATGGA-TTTGAAGGCC
rJMSF017D01+                      TAACTGTCCAAGTCAAGTGTTCCCTGGTTTACATGGA-TTTGAAGGCC
                      ____________________________________________________________
consensus             TATCTTCTGAGTTAACTGTCCAAGTCAAGTGTTCCTTGGTTTACATGGA-TTTGAAGGCC
 
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rJMSF045H09+          GCTCTGATGGTCGTTCAATCAAATCTATTCTTGCCCATGTTGCTCCCTTAAAGCTTGTTT
rJMSF050B23+          GCTCTGATGGTCGTTCAATCAAATCTATTCTTGCCCATGTTGCTCCCTTAAAGCTTGTTT
rJMSF017D01+          GCTCTGATGGTCGTTCAATCAAATCTATTCTTGCCCATGTTGCTCCCTTAAAGCTTGTTT
rJMSF040A13+                                              ATGTTGCTCCCTTAAAGCTTGTTT
                      ____________________________________________________________
consensus             GCTCTGATGGTCGTTCAATCAAATCTATTCTTGCCCATGTTGCTCCCTTAAAGCTTGTTT
 
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rJMSF045H09+          TGGTACATGGCACAGCTGAAGCAACAGAGCATTTGAAACAACATTGTCTGAAGCATGTAT
rJMSF050B23+          TGGTACATGGCACAGCTGAAGCAACAGAGCATTTGAAACAACATTGTCTGAAGCATGTAT
rJMSF017D01+          TGGTACATGGCACAGCTGAAGCAACAGAGCATTTGAAACAACATTGTCTGAAGCATGTAT
rJMSF040A13+          TGGTACATGGCACAGCTGAAGCAACAGAGCATTTGAAACAACATTGTCTGAAGCATGTAT
                      ____________________________________________________________
consensus             TGGTACATGGCACAGCTGAAGCAACAGAGCATTTGAAACAACATTGTCTGAAGCATGTAT
 
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rJMSF045H09+          GCCCACATGTTTATGCTCCCCAAATTGAAGAAACGATTGATGTTACTTCAGATTTGTGTG
rJMSF050B23+          GCCCACATGTTTATGCTCCCCAAATTGAAGAAACGATTGATGTTACTTCAGATTTGTGTG
rJMSF017D01+          GCCCACATGTTTATGCTCCCCAAATTGAAGAAACGATTGATGTTACTTCAGATTTGTGTG
rJMSF040A13+          GCCCACATGTTTATGCTCCCCAAATTGAAGAAACGATTGATGTTACTTCAGATTTGTGTG
                      ____________________________________________________________
consensus             GCCCACATGTTTATGCTCCCCAAATTGAAGAAACGATTGATGTTACTTCAGATTTGTGTG
 
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rJMSF045H09+          CTTATAAGGTGCAACTATCCGAGAAATTAATGAGCAATGTGCTGTTTAAGAAACTTGGAG
rJMSF050B23+          CTTATAAGGTGCAACTATCCGAGAAATTAATGAGCAATGTGCTGTTTAAGAAACTTGGAG
rJMSF017D01+          CTTATAAGGTGCAACTATCCGAGAAATTAATGAGCAATGTGCTGTTTAAGAAACTTGGAG
rJMSF040A13+          CTTATAAGGTGCAACTATCCGAGAAATTAATGAGCAATGTGCTGTTTAAGAAACTTGGAG
                      ____________________________________________________________
consensus             CTTATAAGGTGCAACTATCCGAGAAATTAATGAGCAATGTGCTGTTTAAGAAACTTGGAG
 
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rJMSF045H09+          ACTATGAAATAGCATGGGTTGATGCTGAAGTGGGGAAAACAGACAGTGGCATGTTGTCTT
rJMSF050B23+          ACTATGAAATAGCATGGGTTGATGCTGAAGTGGGGAAAACAGACAGTGGCATGTTGTCTT
rJMSF017D01+          ACTATGAAATAGCATGGGTTGATGCTGAAGTGGGGAAAACAGACAGTGGCATGTTGTCTT
rJMSF040A13+          ACTATGAAATAGCATGGGTTGATGCTGAAGTGGGGAAAACAGACAGTGGCATGTTGTCTT
                      ____________________________________________________________
consensus             ACTATGAAATAGCATGGGTTGATGCTGAAGTGGGGAAAACAGACAGTGGCATGTTGTCTT
 
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rJMSF045H09+          TACTTCCTCTTTCAGATTCTGCTCCACCACATAAGACAGTACTTGTTGGAGACCTAAAAC
rJMSF050B23+          TACTTCCTCTTTCAGATTCTGCTCCACCACATAAGACAGTACTTGTTGGAGACCTAAAAC
rJMSF017D01+          TACTTCCTCTTTCAGATTCTGCTCCACCACATAAGACAGTACTTGTTGGAGACCTAAAAC
rJMSF040A13+          TACTTCCTCTTTCAGATTCTGCTCCACCACATAAGACAGTACTTGTTGGAGACCTAAAAC
                      ____________________________________________________________
consensus             TACTTCCTCTTTCAGATTCTGCTCCACCACATAAGACAGTACTTGTTGGAGACCTAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF045H09+          TGTCAGATTTCAAGCAGTTTCTTGCAAGCAAGGGTGTGCAGGTAGAATTTGCAGGTGGAG
rJMSF050B23+          TGTCAGATTTCAAGCAGTTTCTTGCAAGCAAGGGTGTGCAGGTAGAATTTGCAGGTGGAG
rJMSF017D01+          TGTCAGATTTCAAGCAGTTTCTTGCAAGCAAGGGTGTGCAGGTAGAATTTGCAGGTGGAG
rJMSF040A13+          TGTCAGATTTCAAGCAGTTTCTTGCAAGCAAGGGTGTGCAGGTAGAATTTGCAGGTGGAG
                      ____________________________________________________________
consensus             TGTCAGATTTCAAGCAGTTTCTTGCAAGCAAGGGTGTGCAGGTAGAATTTGCAGGTGGAG
 
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rJMSF045H09+          CCTTACGGTGTGGGGAGTATGTGACTTTGCGAAAAGTAGGAGATGCAAGCCAAAGGGGTG
rJMSF050B23+          CCTTACGGTGTGGGGAGTATGTGACTTTGCGAAAAGTAGGAGATGCAAGCCAAAGGGGTG
rJMSF017D01+          CCTTACGGTGTGGGGAGTATGTGACTTTGCGAAAAGTAGGAGATGCAAGCCAAAGGGGTG
rJMSF040A13+          CCTTACGGTGTGGGGAGTATGTGACTTTGCGAAAAGTAGGAGATGCAAGCCAAAGGGGTG
                      ____________________________________________________________
consensus             CCTTACGGTGTGGGGAGTATGTGACTTTGCGAAAAGTAGGAGATGCAAGCCAAAGGGGTG
 
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rJMSF045H09+          GTGGTGCTGCTGCTATACAACATATCATTCTTGAGGGGCCACTTTCTGAAGAATATTACA
rJMSF050B23+          GTGGTGCTGCTGCTATACAACATATCATTCTTGAGGGGCCACTTTCTGAAGAATATTACA
rJMSF017D01+          GTGGTGCTGCTGCTATACAACATATCATTCTTGAGGGGCCACTTTCTGAAGAATATTACA
rJMSF040A13+          GTGGTGCTGCTGCTATACAACATATCATTCTTGAGGGGCCACTTTCTGAAGAATATTACA
                      ____________________________________________________________
consensus             GTGGTGCTGCTGCTATACAACATATCATTCTTGAGGGGCCACTTTCTGAAGAATATTACA
 
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rJMSF045H09+          CAATTCGGGAGTATTTATATTCACAATTTTATCCCTCTAAATCTGAGTTGGAAGAGATCT
rJMSF050B23+          CAATTCGGGAGTATTTATATTCACAATTTTATCCCTCTAAATCTGAGTTGGAAGAGATCT
rJMSF017D01+          CAATTCGGGAGTATTTATATTCACAATTTTATCCCTCTAAATCTGAGTTGGAAGAGATCT
rJMSF040A13+          CAATTCGGGAGTATTTATATTCACAATTTTATCCCTCTAAATCTGAGTTGGAAGAGATCT
                      ____________________________________________________________
consensus             CAATTCGGGAGTATTTATATTCACAATTTTATCCCTCTAAATCTGAGTTGGAAGAGATCT
 
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rJMSF045H09+          TCATT                                                       
rJMSF050B23+          TCATTCCTCGGGAATTTGATATGTTCGAGTTTGACTTATTTTTCGCAATAGGCTGAATGT
rJMSF017D01+          TCATTCCTCGGGAATTTGATATGTTCGAGTTTGACTTATTTTTCGCAATAGGCTGAATGT
rJMSF040A13+          TCATTCCTCGGGAATTTGATATGTTCGAGTTTGACTTATTTTTCGCAATAGGCTGAATGT
                      ____________________________________________________________
consensus             TCATTCCTCGGGAATTTGATATGTTCGAGTTTGACTTATTTTTCGCAATAGGCTGAATGT
 
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rJMSF050B23+          ATCACAGGACAGGCTGGTATGCATT                                   
rJMSF017D01+          ATCACAGGACAGGCTGGTATGCATT                                   
rJMSF040A13+          ATCACAGGACAGGCTGGTATGCATTTGCCTATGTAAGAAGGATTGTATACATTCAATCAC
                      ____________________________________________________________
consensus             ATCACAGGACAGGCTGGTATGCATTTGCCTATGTAAGAAGGATTGTATACATTCAATCAC
 
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rJMSF040A13+          CTTAATTTTTGTCAAAATCGCTTTCCGAGACGGTGTGTATTGTACCTGCGACACTCAATG
                      ____________________________________________________________
consensus             CTTAATTTTTGTCAAAATCGCTTTCCGAGACGGTGTGTATTGTACCTGCGACACTCAATG