Contig 010049:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005H13Sequence238010049 (5)emb|CDP07923.1|1e-23unnamed protein product [Coffea canephora]
JMFF028L23Sequence610000896 (5)emb|CDP07923.1|7e-61unnamed protein product [Coffea canephora]704010049 (5)emb|CDP07923.1|1e-80unnamed protein product [Coffea canephora]
JMFF036J04Sequence521000896 (5)emb|CDP07923.1|1e-65unnamed protein product [Coffea canephora]710010049 (5)emb|CDP07923.1|6e-81unnamed protein product [Coffea canephora]
JMSF007B08Sequence242000896 (5)emb|CDP07923.1|2e-30unnamed protein product [Coffea canephora]773010049 (5)emb|CDP07923.1|4e-99unnamed protein product [Coffea canephora]
JMSF039H16Sequence595000896 (5)emb|CDP07923.1|3e-49unnamed protein product [Coffea canephora]898010049 (5)emb|CDP07923.1|1e-81unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF007B08+                                                        GCAGGTGTATGATG
rJMSF039H16+           TAATGAAGCTGTTTCTCAGACAATCAAAACCAACTTCATCTTTTGGCAGGTGTATGATG
                      ____________________________________________________________
consensus              TAATGAAGCTGTTTCTCAGACAATCAAAACCAACTTCATCTTTTGGCAGGTGTATGATG
 
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rJMSF007B08+          ATACAGAAGA-GGGCAGCAAGGTTCGCACCTATTACAAGTTAGATTCAATTCCTGTGGTT
rJMSF039H16+          ATACAGAAGAGGGGCAGCAAGGTTCGCACCTATTACAAGTTAGATTCAATTCCTGTGGTT
                      ____________________________________________________________
consensus             ATACAGAAGAGGGGCAGCAAGGTTCGCACCTATTACAAGTTAGATTCAATTCCTGTGGTT
 
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rJMFF005H13+             GTGGTTGACCCTATAACAGGTCAGAAGATGCGATCATGGCGTGGAATGGTCCAGCCT
rJMSF007B08+          CTGGTGGTTGACCCTATAACAGGTCAGAAGATGCGATCATGGCGTGGAATGGTCCAGCCT
rJMFF028L23+                  TGACCCTATAACAGGTCAGAAGATGCGATCATGGCGTGGAATGGTCCAGCCT
rJMFF036J04+             GTGGTTGACCCTATACCAGGTCAGAAGATGCGATCATGGCGTGGAATGGTCCAGCCT
rJMSF039H16+          CTGGTGGTTGACCCTATAACAGGTCAGAAGATGCGATCATGGCGTGGAATGGTCCAGCCT
                      ____________________________________________________________
consensus             CTGGTGGTTGACCCTATAACAGGTCAGAAGATGCGATCATGGCGTGGAATGGTCCAGCCT
 
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rJMFF005H13+          GAAACTTTGCTGGAGGATCTGTTACCATTCATGGATGGTAGTCCATCAGATCATGTGAGT
rJMSF007B08+          GAAACTTTGCTGGAGGATCTGTTACCATTCATGGATGGTAGTCCATCAGATCATGTGAGT
rJMFF028L23+          GAAACTTTGCTGGAGGATCTGTTACCATTCATGGATGGTAGTCCATCAGATCATGTGAGT
rJMFF036J04+          GAAACTTTGCTGGAGGATCTGTTACCATTCATGGATGGTAGTCCATCAGATCATGTGAGT
rJMSF039H16+          GAAACTTTGNTGGAGGATCTGTTACCATTCATGGATGGTAGTCCATCAGATCATGTGAGT
                      ____________________________________________________________
consensus             GAAACTTTGCTGGAGGATCTGTTACCATTCATGGATGGTAGTCCATCAGATCATGTGAGT
 
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rJMFF005H13+          CTATCTCATAAACGACCTAGAGAAAGTCCTCAAGCACCTCCTCTACATAAAGATGATGCT
rJMSF007B08+          CTATCTCATAAACGACCTAGAGAAAGTCCTCAAGCACCTCCTCTACATAAAGATGATGCT
rJMFF028L23+          CTATCTCATAAACGACCTAGAGAAAGTCCTCAAGCACCTCCTCTACATAAAGATGATGCT
rJMFF036J04+          CTATCTCATAAACGACCTAGAGAAAGTCCTCAAGCACCTCCTCTACATAAAGATGATGCT
rJMSF039H16+          CTATCTCATAAACGACCTAGAGAAAGTCCTCAAGCACCTCCTCTACATAAAGATGATGCT
                      ____________________________________________________________
consensus             CTATCTCATAAACGACCTAGAGAAAGTCCTCAAGCACCTCCTCTACATAAAGATGATGCT
 
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rJMFF005H13+          AAAGAAGAAGACGAGGAACTGNTACAAGCATTGGCTGCTTCCATGGAAGGAATGAAGGAT
rJMSF007B08+          AAAGAAGAAGACGAGGAACTGCTACAAGCATTGGCTGCTTCCATGGAAGGAATGAAGGAT
rJMFF028L23+          AAAGAAGAAGACGAGGAACTGCTACAAGCATTGGCTGCTTCCATGGAAGGAATGAAGGAT
rJMFF036J04+          AAAGAAGAAGACGAGGAACTGCTACAAGCATTGGCTGCTTCCATGGAAGGAATGAAGGAT
rJMSF039H16+          AAAGAAGAAGACGAGGAACTGCTACAAGCATTGGCTGCTTCCATGGAAGGAATGAAGGAT
                      ____________________________________________________________
consensus             AAAGAAGAAGACGAGGAACTGCTACAAGCATTGGCTGCTTCCATGGAAGGAATGAAGGAT
 
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rJMFF005H13+          A                                                           
rJMSF007B08+          ACTAATGTAGACGCTTTAAAAGAATCCAGTGAGAGCGATGTTTTAGGGAAAGAAACAAAT
rJMFF028L23+          ACTAATGTAGACGCTTTAAAAGAATCCAGTGAGAGCGATGTTTTAGGGAAAGAAACAAAT
rJMFF036J04+          ACTAATGTAGACGCTTTAAAAGAATCCAGTGAGAGCGATGTTTTAGGGAAAGAAACAAAT
rJMSF039H16+          ACTAATGTAGACGCTTTAAAAGAATCCAGTGAGAGCGATG-TTTAGGGAAAGAAACAAAT
                      ____________________________________________________________
consensus             ACTAATGTAGACGCTTTAAAAGAATCCAGTGAGAGCGATGTTTTAGGGAAAGAAACAAAT
 
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rJMSF007B08+          GTAGTGAAAAAGCCTGTTTATCCTCCTCTTCCTGAAGAACCCAAGGGTGATAAGAACCTC
rJMFF028L23+          GTAGTGAAAAAGCCTGTTTATCCTCCTCTTCCTGAAGAACCCAAGGGTGATAAGAACCTC
rJMFF036J04+          GTAGTGAAAAAGCCTGTTTATCCTCCTCTTCCTGAAGAACCCAAGGGTGATAAGAACCTC
rJMSF039H16+          GTAGTGAAAAAGCCTGTTTATCCTCCTCTTCCTGAAGAACCCAAGGGTGATAAGAACCTC
                      ____________________________________________________________
consensus             GTAGTGAAAAAGCCTGTTTATCCTCCTCTTCCTGAAGAACCCAAGGGTGATAAGAACCTC
 
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rJMSF007B08+          GTTTGCAGAGTTGGGATTCGCCTTCCTGATGGACGTAGACTTCAAAGAAACTTCTTACGC
rJMFF028L23+          GTTTGCAGAGTTGGGATTCGCCTTCCTGATGGACGTAGACTTCAAAGAAACTTCTTACGC
rJMFF036J04+          GTTTGCAGAGTTGGGATTCGCCTTCCTGATGGACGTAGACTTCAAAGAAACTTCTTACGC
rJMSF039H16+          GTTTGCAGAGTTGGGATTCGCCTTCCTGATGGACGTAGACTTCAAAGAAACTTCTTACGC
                      ____________________________________________________________
consensus             GTTTGCAGAGTTGGGATTCGCCTTCCTGATGGACGTAGACTTCAAAGAAACTTCTTACGC
 
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rJMSF007B08+          AGTGATCCAATTCAGCTGCTATGGTCCTTCTGCTCTTCTCATCTCGAGGAAACTGATGCA
rJMFF028L23+          AGTGATCCAATTCAGCTGCTATGGTCCTTCTGCTCTTCTCATCTCGAGGAAACTGATGCA
rJMFF036J04+          AGTGATCCAATTCAGCTGCTATGGTCCTTCTGCTCTTCTCATCTCGAGGAAACTGATGCA
rJMSF039H16+          AGTGATCCAATTCAGCTGCTATGGTCCTTCTGCTCTTCTCATCTCGAGGAAACTGATGCA
                      ____________________________________________________________
consensus             AGTGATCCAATTCAGCTGCTATGGTCCTTCTGCTCTTCTCATCTCGAGGAAACTGATGCA
 
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rJMSF007B08+          AAGCCATTTCGCTTGACACAAGCAATCCCCGGGGCTACAAGTTCTTTGGACTTCGAGAGT
rJMFF028L23+          AAGCCATTTCGCTTGACACAAGCAATCCCCGGGGCTACAAGTTCTTTGGACTTCGAGAGT
rJMFF036J04+          AAGCCATTTCGCTTGACACAAGCAATCCCCGGGGCTACAAGTTCTTTGGACTTCGAGAGT
rJMSF039H16+          AAGCCATTTCGCTTGACACAAGCAATCCCCGGGGCTACAAGTTCTTTGGACTTCGAGAGT
                      ____________________________________________________________
consensus             AAGCCATTTCGCTTGACACAAGCAATCCCCGGGGCTACAAGTTCTTTGGACTTCGAGAGT
 
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rJMSF007B08+          AATTTAACCTTCGAGGAGTCAGGTCTTGCCAACTCCATGATTTCGGTAACTTGGGATTGA
rJMFF028L23+          AATTTAACCTTCGAGGAGTCAGGTCTTGCCAACTCCATGATTTCGGTAACTTGGGATTGA
rJMFF036J04+          AATTTAACCTTCGAGGAGTCAGGTCTTGCCAACTCCATGATTTCGGTAACTTGGGATTGA
rJMSF039H16+          AATTTAACCTTCGAGGAGTCAGGTCTTGCCAACTCCATGATTTCGGTAACTTGGGATTGA
                      ____________________________________________________________
consensus             AATTTAACCTTCGAGGAGTCAGGTCTTGCCAACTCCATGATTTCGGTAACTTGGGATTGA
 
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rJMSF007B08+          TCGAAGATGATAACTGTTTGTTTCTCAAGCATGTAAAATGCTAGAATCTTTATCTTTGTT
rJMFF028L23+          TCGAAGATGATAACTGTTTGTTTCTCAAGCATGTAAAATGCTAGAATCTTTATCTTTGTT
rJMFF036J04+          TCGAAGATGATAACTGTTTGTTTCTCAAGCATGTAAAATGCTAGAATCTTTATCTTTGTT
rJMSF039H16+          TCGAAGATGATAACTGTTTGTTTCTCAAGCATGTAAAATGCTAGAATCTTTATCTTTGTT
                      ____________________________________________________________
consensus             TCGAAGATGATAACTGTTTGTTTCTCAAGCATGTAAAATGCTAGAATCTTTATCTTTGTT
 
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rJMSF007B08+          TCAGCTGCATCTTGTCACATTATGTGTATAATCCAAATTG                    
rJMFF028L23+          TCAGCTGCATCTTGTCACATTATGTGTATAATCCAAATTGTTTA                
rJMFF036J04+          TCAGCTGCATCTTGTCACATTATGTGTATAATCCAAATTGTTTA                
rJMSF039H16+          TCAGCTGCATCTTGTCACATTATGTGTATAATCCAAATTGTTTATGTCAAGAATCTGCTG
                      ____________________________________________________________
consensus             TCAGCTGCATCTTGTCACATTATGTGTATAATCCAAATTGTTTATGTCAAGAATCTGCTG
 
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rJMSF039H16+          GGCTTTTGAATGCAGCTTTTCTTGTTGCACTTTTGGCATGTGCTTGTTAGAACAACACAT
                      ____________________________________________________________
consensus             GGCTTTTGAATGCAGCTTTTCTTGTTGCACTTTTGGCATGTGCTTGTTAGAACAACACAT