Contig 010048:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002B05Sequence276013203 (4)775010048 (4)ref|XP_006431220.1|5e-34hypothetical protein CICLE_v100116002mg, partial [Citrus clementina] gb|ESR44460
JMSF039H05Sequence707013203 (4)ref|XP_009625279.1|3e-110PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofo908010048 (4)gb|AFN89137.1|3e-17sucrose non-fermenting 1 [Mesembryanthemum crystallinum]
JMSF040K17Sequence660013203 (4)ref|XP_009625279.1|4e-94PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofo710010048 (4)
JMSF048H12Sequence644013203 (4)ref|XP_009625279.1|5e-94PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like isofo721010048 (4)gb|ADN44282.1|2e-66sucrose non-fermenting-1-related protein kinase 1 [Capsicum annuum]

Alignment

This contig is upended


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rJMSF048H12+                                ACCGCTTTCGTGCTTCCAGTGGCTATCTGGGTGCTGAA
                      ____________________________________________________________
consensus                                   ACCGCTTTCGTGCTTCCAGTGGCTATCTGGGTGCTGAA
 
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rJMSF048H12+          TTTCAGGAGTCAGTGGAATATGGTTTCAACCAAATGAACTCAAATGATTTTGTGGCATTC
                      ____________________________________________________________
consensus             TTTCAGGAGTCAGTGGAATATGGTTTCAACCAAATGAACTCAAATGATTTTGTGGCATTC
 
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rJMSF048H12+          CCTTCTGGGCAACGCTTCCCTGGGACTATGGATTATCAACCAGTTGGTGCAAGACAGTTT
                      ____________________________________________________________
consensus             CCTTCTGGGCAACGCTTCCCTGGGACTATGGATTATCAACCAGTTGGTGCAAGACAGTTT
 
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rJMSF048H12+          CTAGTTGAAAGGAAATGGGCTCTTGGGCTCCAGTCCCGGGCTCATCCACGTGAAATAATG
rJMSF002B05+                                                              AAATAATG
                      ____________________________________________________________
consensus             CTAGTTGAAAGGAAATGGGCTCTTGGGCTCCAGTCCCGGGCTCATCCACGTGAAATAATG
 
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rJMSF048H12+          ACTGAAGTTCTTAAAGCCCTACAAGAGCTAAATGTGTGTTGG--AAAAAATTGGGCATTA
rJMSF002B05+          ACTGAAGTTNTTAAAGNCCTACAAGAGCTAAATGTGTGGTGGAAAAAAAATTGGGCATTA
                      ____________________________________________________________
consensus             ACTGAAGTTCTTAAAGCCCTACAAGAGCTAAATGTGTGTTGGAAAAAAAATTGGGCATTA
 
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rJMSF048H12+          CAACATGAAATGCAGGTGGATTCCCAGCATATCTGGTCAGCATGAAGGTTCAGTGAACAA
rJMSF002B05+          CAACATGAAATGCAGGTGGATTCCCAGCATACCTGGTCAACATGAAGGTTCAGTGAACAA
rJMSF039H05+             CATGAAATGCAGGTGGATTCCCAGCATACCTGGTCAGCATGAAGGTTCAGTGAACAA
                      ____________________________________________________________
consensus             CAACATGAAATGCAGGTGGATTCCCAGCATACCTGGTCAGCATGAAGGTTCAGTGAACAA
 
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rJMSF048H12+          TT-CATTGCACAATAATAA-TTTCTTTGAAGATGAATCTACTATCATAGAAAATCATGGC
rJMSF002B05+          TT-CATTGCACAATAATAA-TTTCTTTGAAGATGAATCTACTATCATAGAAAATCATGGC
rJMSF039H05+          TTCCATTGCACAATAATAATTTTCTTTGAAGATGAATCTACTATCATAGAAAATCATGGC
                      ____________________________________________________________
consensus             TT-CATTGCACAATAATAA-TTTCTTTGAAGATGAATCTACTATCATAGAAAATCATGGC
 
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rJMSF048H12+          ATTTCTAGAGCAGCGAATGTGGTCAAATTTGAAGTTCAGCTCTACAAAACTCGTGACAAT
rJMSF002B05+          ATTTCTAGAGCAGCGAATGTGGTCAAATTTGAAGTTCAGCTCTACAAAACTCGTGACAAT
rJMSF040K17+                                                       AAAACTCGTGACAAT
rJMSF039H05+          ATTTCTAGAGCAGCGAATGTGGTCAAATTTGAAGTTCAGCTCTACAAAACTCGTGACAAT
                      ____________________________________________________________
consensus             ATTTCTAGAGCAGCGAATGTGGTCAAATTTGAAGTTCAGCTCTACAAAACTCGTGACAAT
 
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rJMSF048H12+          AAGTACCTATTGGACCTGCAAAAGGTTCAGGGGCCACAGCTCCTCTTCCTGGATCTTTGT
rJMSF002B05+          AAGTACCTATTGGACCTGCAAAAGGTTCAGGGGCCACAGCTCCTCTTCCTGGATCTTTGT
rJMSF040K17+          AAGTACCTATTGGACCTGCAAAAGGTTCAGGGGCCACAGCTCCTCTTCCTGGATCTTTGT
rJMSF039H05+          AAGTACCTATTGGACCTGCAAAAGGTTCAGGGGCCACAGCTCCTCTTCCTGGATCTTTGT
                      ____________________________________________________________
consensus             AAGTACCTATTGGACCTGCAAAAGGTTCAGGGGCCACAGCTCCTCTTCCTGGATCTTTGT
 
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rJMSF048H12+          GCTGCTTTCCTTGCTCAGCTTAGAGTGCTGTGAAGACAGGCTGAGAGTATAAACATGTGG
rJMSF002B05+          GCTGCTTTCCTTGCTCAGCTTAGAGTGCTGTGAAGACAGGCTGAGAGTATAAACATGTGG
rJMSF040K17+          GCTGCTTTCCTTGCTCAGCTTAGAGTGCTGTGAAGACAGGCTGAGAGTATAAACATGTGG
rJMSF039H05+          GCTGCTTTCCTTGCTCAGCTTAGAGTGCTGTGAAGACAGGCTGAGAGTATAAACATGTGG
                      ____________________________________________________________
consensus             GCTGCTTTCCTTGCTCAGCTTAGAGTGCTGTGAAGACAGGCTGAGAGTATAAACATGTGG
 
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rJMSF048H12+          TGGTGGAGGAGGATATCATTAATGCTGTACATAATTGCAATTAACAGCCTCCTTATTTTC
rJMSF002B05+          TGGTGGAGGAGGATATCATTAATGCTGTACATAATTGCAATTAACAGCCTCCTTATTTTC
rJMSF040K17+          TGGTGGAGGAGGATATCATTAATGCTGTACATAATTGCAATTAACAGCCTCCTTATTTTC
rJMSF039H05+          TGGTGGAGGAGGATATCATTAATGCTGTACATAATTGCAATTAACAGCCTCCTTATTTTC
                      ____________________________________________________________
consensus             TGGTGGAGGAGGATATCATTAATGCTGTACATAATTGCAATTAACAGCCTCCTTATTTTC
 
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rJMSF048H12+          TGTTTCCCCTTAACTTTTACATTCAGTCAGCATAACGGTGACGGTCTAAACGACTAAACC
rJMSF002B05+          TGTTTCCCCTTAACTTTTACATTCAGTCAGCATAACGGTGACGGTCTAAACGACTAAACC
rJMSF040K17+          TGTTTCCCCTTAACTTTTACATTCAGTCAGCATAACGGTGACGGTCTAAACGACTAAACC
rJMSF039H05+          TGTTTCCCCTTAACTTTTACATTCAGTCAGCATAACGGTGACGGTCTAAACGACTAAACC
                      ____________________________________________________________
consensus             TGTTTCCCCTTAACTTTTACATTCAGTCAGCATAACGGTGACGGTCTAAACGACTAAACC
 
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rJMSF048H12+          TGATTTTCTTTCTCTTTTATCTGAA                                   
rJMSF002B05+          TGATTTTCTTTCTCTTTTATCTGAATTGTGCCACCCTGATATTCAGAGGTGAGTATGGTG
rJMSF040K17+          TGATTTTCTTTNTNTTTTATCTGAANTGTGCCACCCTGATATTCAGAGGTGAGTATGGTG
rJMSF039H05+          TGATTTTCTTTCTCTTTTATCTGAATTGTGCCACCCTGATATTCAGAGGTGAGTATGGTG
                      ____________________________________________________________
consensus             TGATTTTCTTTCTCTTTTATCTGAATTGTGCCACCCTGATATTCAGAGGTGAGTATGGTG
 
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rJMSF002B05+          CCAAGCCAATATTTTTGTCCGACTCACTAGGAGTTGTGGCTTTTGCCCAAATTGCTTTTC
rJMSF040K17+          CCAAGCCAATATTTTTGTCCGACTCACTAGGAGTTGTGGCTTTTGCCCAAATTGCTTTTC
rJMSF039H05+          CCAAGCCAATATTTTTGTCCGACTCACTAGGAGTTGTGGCTTTTGCCCAAATTGCTTTTC
                      ____________________________________________________________
consensus             CCAAGCCAATATTTTTGTCCGACTCACTAGGAGTTGTGGCTTTTGCCCAAATTGCTTTTC
 
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rJMSF002B05+          ATTTCCAACTATGATAGTCTTTGGTGTTATCGGCAGTTTGCTTTGCTTGTCTAACTATGT
rJMSF040K17+          ATTTCCAACTATGATAGTCTTTGGTGTTATCGGCAGTTTGCTTTGCTTGTCTAACTATGT
rJMSF039H05+          ATTTCCAACTATGATAGTCTTTGGTGTTATCGGCAGTTTGCTTTGCTTGTCTAACTATGT
                      ____________________________________________________________
consensus             ATTTCCAACTATGATAGTCTTTGGTGTTATCGGCAGTTTGCTTTGCTTGTCTAACTATGT
 
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rJMSF002B05+          AGAGACTAAAACTAAGGGCTTACATGGCAGCTGCACCCCGGAAAACCACCAAGACTATCC
rJMSF040K17+          AGAGACTAAAACTAAGGGCTTACATGGCAGCTGCACCCCGGAAAACCACCAAGACTATCC
rJMSF039H05+          AGAGACTAAAACTAAGGGCTTACATGGCAGCTGCACCCCGGAAAACCACCAAGACTATCC
                      ____________________________________________________________
consensus             AGAGACTAAAACTAAGGGCTTACATGGCAGCTGCACCCCGGAAAACCACCAAGACTATCC
 
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rJMSF002B05+          TTCTTTGCTGCTATTATATGGCCTAAAAACCAGTAC                        
rJMSF040K17+          TTCTTTGCTGCTATTATATGGCCTAAAAACCAGTACATGACAAAGTGTAGTTATTGTTAA
rJMSF039H05+          TTCTTTGCTGCTATTATATGGCCTAAAAACCAGTACATGACAAAGTGTAGTTATTGTTAA
                      ____________________________________________________________
consensus             TTCTTTGCTGCTATTATATGGCCTAAAAACCAGTACATGACAAAGTGTAGTTATTGTTAA
 
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rJMSF040K17+          TACTGGTTGATCTATTTTTATTCTCTTGCTACATGTGATGAATAGAAAGAGCATTTAGAA
rJMSF039H05+          TACTGGTTGATCTATTTTTATTCTCTTGCTACATGTGATGAATAGAAAGAGCATTTAGAA
                      ____________________________________________________________
consensus             TACTGGTTGATCTATTTTTATTCTCTTGCTACATGTGATGAATAGAAAGAGCATTTAGAA
 
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rJMSF040K17+          TGACTTGTTGTAATACAAGTTTAGTAGTCTTTAAGTTAACATGATCGTA           
rJMSF039H05+          TGA-TTGTTGTAATACAAGTTTAGTAGTCTTTAAGTTAACATGATCGTAGGTTGTCAAGG
                      ____________________________________________________________
consensus             TGACTTGTTGTAATACAAGTTTAGTAGTCTTTAAGTTAACATGATCGTAGGTTGTCAAGG
 
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rJMSF039H05+          TCAAGGTTGTTTATTTAGTTACGACAAGTTAACATTTAAAACTGCTGTAGCATTCTTCTT
                      ____________________________________________________________
consensus             TCAAGGTTGTTTATTTAGTTACGACAAGTTAACATTTAAAACTGCTGTAGCATTCTTCTT